Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19542 LG5 8661256 8664660 PREDICTED: probable serine/threonine-protein kinase NAK
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to chitin, regulation of signal transduction, defense response to bacterium, immune effector process, salicylic acid mediated signaling pathway, salicylic acid mediated signaling pathway, hormone-mediated signaling pathway, defense response to fungus, glycosyl compound metabolic process, protein phosphorylation, hormone-mediated signaling pathway, defense response to fungus, response to lipid, regulation of defense response, regulation of signal transduction, regulation of signal transduction, defense response to bacterium, protein phosphorylation, negative regulation of cellular process, hormone-mediated signaling pathway, protein phosphorylation, salicylic acid mediated signaling pathway, hormone-mediated signaling pathway, defense response to bacterium, defense response to fungus
Cellular Component   located in   plasma membrane
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
T/C 8661524 5_prime_UTR_premature_start_codon_gain_variant
G/A 8661532 5_prime_UTR_variant
G/T 8661563 splice_region_variant
G/T 8661565 5_prime_UTR_premature_start_codon_gain_variant
T/A 8661571 5_prime_UTR_premature_start_codon_gain_variant
T/A 8661852 intron_variant
A/T 8662240 intron_variant
G/A 8662560 missense_variant p.Gly117Arg
C/A 8662565 missense_variant p.Phe118Leu
T/A 8662774 intron_variant
T/A 8663145 missense_variant p.Ser181Arg
T/G 8663146 missense_variant p.Leu182Val
G/T 8663167 missense_variant p.Gly189Trp
G/A 8663178 synonymous_variant p.Lys192Lys
T/G 8663667 intron_variant
C/T 8664240 synonymous_variant p.Gly380Gly
G/T 8664266 missense_variant p.Gly389Val
C/T 8664555 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19542.1
MGACWSNRIKAVSPSNTGITSRSVSRSGHDISSASRNSSASISVTSRSEGEILQSSNLKSFSYNELRVATRNFRPDSVLGEGGFGSVFKGWIDEHSLTATKPGIGMIVAVKKLNQDGFQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRLKIALGAAKGLAFLHSTEAKVIYRDFKTSNILLDTHYNAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNQPSGEHNLVEWAKPYLSNKRRVFRIMDPRLEGQYSHTRAQAAAALAMQCLSVESKCRPTMDEVVKALEQLQESKDMQRKGADHKHHHVRNSGQGRSTGTPGGADVPRIASAYPRPTASLLGG*

>Vu_19542.2
MGACWSNRIKAVSPSNTGITSRSVSRSGHDISSASRNSSASISVTSRSEGEILQSSNLKSFSYNELRVATRNFRPDSVLGEGGFGSVFKGWIDEHSLTATKPGIGMIVAVKKLNQDGFQGHREWLAEINYLGQLQHPNLVKLIGYCFEDEHRLLVYEFMPKGSMENHLFRRGSYFQPFSWSLRLKIALGAAKGLAFLHSTEAKVIYRDFKTSNILLDTHYNAKLSDFGLARDGPTGDKSHVSTRVMGTRGYAAPEYLATGHLTAKSDVYSFGVVLLEMISGRRAIDKNQPSGEHNLVEWAKPYLSNKRRVFRIMDPRLEGQYSHTRAQAAAALAMQCLSVESKCRPTMDEVVKALEQLQESKDMQRKGADHKHHHVRNSGQGRSTGTPGGADVPRIASAYPRPTASLLGG*


CDS Sequence:
>Vu_19542.1
ATGGGTGCTTGCTGGAGTAATAGGATTAAGGCTGTGAGTCCTTCCAATACAGGGATAACCTCGAGAAGTGTCAGCAGGAGTGGCCATGACATCAGCTCAGCTAGCAGGAACTCATCAGCCTCCATATCCGTCACTTCTCGGAGTGAAGGTGAAATCTTGCAATCATCCAACTTGAAAAGCTTCAGCTATAATGAGCTAAGAGTCGCCACAAGAAATTTCCGCCCAGATAGTGTCTTGGGGGAGGGTGGGTTTGGTTCAGTTTTTAAGGGCTGGATTGATGAACATTCACTTACTGCTACCAAACCGGGAATAGGCATGATTGTTGCTGTGAAGAAGCTTAACCAAGATGGGTTCCAGGGTCACAGAGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTGCAGCATCCTAATCTTGTCAAGTTAATAGGATACTGCTTTGAGGATGAGCATCGGCTTTTGGTTTACGAATTCATGCCTAAGGGTAGCATGGAAAATCATCTTTTTAGAAGAGGTTCTTACTTTCAGCCATTCTCATGGAGTTTGCGACTGAAAATAGCTCTTGGGGCTGCGAAGGGCCTTGCTTTTCTTCACAGTACAGAAGCTAAAGTCATATATCGTGACTTTAAAACTTCAAATATCCTACTTGATACACATTATAACGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGTCCAACTGGTGATAAAAGCCATGTCTCTACCAGGGTCATGGGAACCCGAGGATATGCGGCTCCAGAGTATTTAGCTACAGGTCATCTCACTGCCAAGAGTGACGTATATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCGGGAAGACGAGCCATAGACAAGAACCAGCCATCTGGGGAGCATAACCTTGTTGAATGGGCAAAACCTTACCTTTCTAATAAACGAAGAGTTTTCCGTATAATGGATCCACGTTTGGAAGGTCAATATTCACATACTCGAGCTCAAGCAGCAGCTGCACTTGCCATGCAATGTCTTTCTGTAGAGTCCAAGTGCAGGCCAACTATGGATGAGGTGGTAAAAGCATTGGAGCAGCTTCAGGAATCAAAGGACATGCAGAGAAAAGGTGCTGATCATAAACATCATCATGTACGCAATTCCGGCCAAGGCCGATCAACCGGCACCCCTGGTGGTGCAGATGTGCCTAGAATTGCTTCTGCTTATCCTAGACCTACAGCTTCTCTCCTTGGCGGTTGA

>Vu_19542.2
ATGGGTGCTTGCTGGAGTAATAGGATTAAGGCTGTGAGTCCTTCCAATACAGGGATAACCTCGAGAAGTGTCAGCAGGAGTGGCCATGACATCAGCTCAGCTAGCAGGAACTCATCAGCCTCCATATCCGTCACTTCTCGGAGTGAAGGTGAAATCTTGCAATCATCCAACTTGAAAAGCTTCAGCTATAATGAGCTAAGAGTCGCCACAAGAAATTTCCGCCCAGATAGTGTCTTGGGGGAGGGTGGGTTTGGTTCAGTTTTTAAGGGCTGGATTGATGAACATTCACTTACTGCTACCAAACCGGGAATAGGCATGATTGTTGCTGTGAAGAAGCTTAACCAAGATGGGTTCCAGGGTCACAGAGAATGGTTGGCTGAAATCAACTATCTTGGGCAACTGCAGCATCCTAATCTTGTCAAGTTAATAGGATACTGCTTTGAGGATGAGCATCGGCTTTTGGTTTACGAATTCATGCCTAAGGGTAGCATGGAAAATCATCTTTTTAGAAGAGGTTCTTACTTTCAGCCATTCTCATGGAGTTTGCGACTGAAAATAGCTCTTGGGGCTGCGAAGGGCCTTGCTTTTCTTCACAGTACAGAAGCTAAAGTCATATATCGTGACTTTAAAACTTCAAATATCCTACTTGATACACATTATAACGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGTCCAACTGGTGATAAAAGCCATGTCTCTACCAGGGTCATGGGAACCCGAGGATATGCGGCTCCAGAGTATTTAGCTACAGGTCATCTCACTGCCAAGAGTGACGTATATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCGGGAAGACGAGCCATAGACAAGAACCAGCCATCTGGGGAGCATAACCTTGTTGAATGGGCAAAACCTTACCTTTCTAATAAACGAAGAGTTTTCCGTATAATGGATCCACGTTTGGAAGGTCAATATTCACATACTCGAGCTCAAGCAGCAGCTGCACTTGCCATGCAATGTCTTTCTGTAGAGTCCAAGTGCAGGCCAACTATGGATGAGGTGGTAAAAGCATTGGAGCAGCTTCAGGAATCAAAGGACATGCAGAGAAAAGGTGCTGATCATAAACATCATCATGTACGCAATTCCGGCCAAGGCCGATCAACCGGCACCCCTGGTGGTGCAGATGTGCCTAGAATTGCTTCTGCTTATCCTAGACCTACAGCTTCTCTCCTTGGCGGTTGA


Promoter Sequence:
>Vu_19542::LG5:8659256-8661256(+)
GAATAACAATGCACCAATTTCATCGACTAACCTTCAAATTCATTAAAAAAATTGATAAAATACATTATGTATATGAGAAAACATTTAAGAAGTCATTTGTAATGAGTCTTTGGAAGAAAAAAAATCAATATTTTTTTATCTTCCATATTAGTCAAAGTTAGAGGTTAAACATTGCATAAATGTAATGCATGTAAAAAAGAATGTCTGTGACTTGATTAATACACTACTCAACATTCAAGAAAATATATAAGATAGAGTAAATGCTCATTTAGATTTGATTGAAATGAAGATTCAATAAGACTTAAGAGCTTAATAAATATACTTATTTGCTCCTTATATGTTACCTTTTGTAATTATACTTCAAATGTTATAGAAATAAATATATTCTATCATTCAAATTAATAATCTTTTTATTACACTAATTAATTATATTTACAATAGTTCGAAATGGTTTAACTTTAAACTCTTTATAAAACTTTTTAGAAGCAATATTATATTGTTTTAAATGGTTTCATGTACAGTTCTTTTTCTTCTTCTAGAAATTATACACTTATATAGCGTTGACTTAGTCAATTTTATATGATTTTAACCAATATTTTGAATTGGAGTAATTTTTTGTACAACATGATTGAAAAAAAAAATGGTACAAAGAAAAGACTAATATGAGAGAATATTCAATTGCATGTGTTTGGTGTCGATTTGAAATATGTATGGAACAGATCCTTCGGATAAAAAAGGGCAAAAGAGGTTTTTGAGTTTAAAACTTTGTATTTATGTATAAATTTTTGTTTCTTTGATAAAGAAAGATTATATGAAAATAAATGAGAAAGATATAATCTAAGATAATCCATACTATTAAAAGAGATAAAAAAATATTATTATAATCAAAATTACATAAAATTAAAAACAACACTAAGAAAGCTGGTTAAGATGAACATTACGCACCTGTGAAAAATTTGAAAACCTATAATTGATGAAAAAAATATTAAAATTTTAGAATTGACAAGTGAATTTGTCTCATATTTTAAATTATTTAATTTTAATTTGAAGTAGGTTGATCCATTTCATACAATGACATAACTAAATATGAAATCAGAGAAAAACAAATCTATTTATAAAATATATCAAAATAGACTAAGTATATATAAGGCTATTAAAAATAAGCTAATTACAAAAATAACTAAGTCAATTTGATATTCATACTATTATCCTACAATTTCTTTCTTTAATAATTTTTTACTATCATTCAAGTAAACACATAAAAAAACATTTTTACTACAAAACAGGATATTTCAAACTATTTTGTGGTAAAATATGTAATATTTTGATAATTTTTCAAAATAAAAATATTACGAATATGCATGATAAGTAATATTTTAAATAACATTGAAAATAATAGTTAGTGTTTTAAATTACATCGAATGTAGAAAATGAAAAGCTTATATTACCATAATAAACATAAACTGATGAAATAAGTGACAGTCTAATAATTGTAAAATATGTAAACAGGAATCATTAAATAGCAGTGGGGACAAAGTCTCAGAAGAAGACAACACTCCTTGACCGACAAAAACGTGATGATTGTGTAAAATTATTATTTTTTTTTCCTTTGACGGAAGTGTAAAATTAAACTTCAAACTAAAAAACTTATACGATGATTATAAGCTCTTTCATCATCATCGTTATTATAAACAAGATGAAATCACCCGACAAATAAATATAATCTTCTTTGACCAATTTCATGAACAGTTTTTTGAATTATCATTTTCATTTTTTAACACTTATTTGAGGCACTAAACTCTTAAGTTTCAAGTTCTCAACTAATGTATATGATTTTAATTTTTTATGTTTAGATAATTATAGTTTGATGTTATATTCCCTTAATTAATGTTGGGTGGAAAAAGGACAAAAAGAAGAAGGTGGTGAAAGGTGAAGTCAACCTTCTATTCCACTTTCGCTGGTTTGCCAAAAGGGTCTAAAAAAGGCTACAATATTATCAT


Gene Sequence:
>Vu_19542(+)
TTTACAAAAGCCACCATCAACAAAGTGATCAAAGTTCCTGTTTTGACCCTTCTAGCTTCCTTCCACGACCCTTCTCATCAAACCCCTAATCATAAAGGGTCGAAAAAGGCTTCGGAAATCTAAGCTACTGAGTGCGTAATTACTGAGATCTGCCTTCATCCTGGTGGGTTCAACAGTGTTTCATTCTGGGGTTTGTTGGCCCTTTTTTCCTCATTTCTGCAAATTTGCATTTTCACCCTTTAGAGTTTCAGACTATGTGGTTTTTTGCTTGCATCTGAAAGGCTCAACCTTTGACTTGGTCACAGGGGTGGTTTGTTGATGGGTGCTTGCTGGAGTAATAGGATTAAGGCTGTGAGTCCTTCCAATACAGGTCAGTTTTTTTTTTTTTTTGCCTTGTAACTTTATTTTCTTCTATGTCAATTGTTAAAATGGGCTAACTTTTCTTCCGGGGTTGGAGATGAACATGTGATAGGCTTAAAGCTGATAACTTTATGGATGGTTTTGCTGTCATGTTCATGTTTTCGAGTCTGTAATACATGATTAAGGTCCTTGAAGGTCTGTTATGCCTTTTCTGACACGGTGATCTGTGTGTGATGTAAAAAGGGGTTTGATTTCAGAGACCCATTGGATGGGTAGATTTTGGATTTGGGTATTCAAGAGAATTGTAGCTTTTCCACACTCCCTTGAAAGTTCATCTTAGGCTTGATTTGGTATGTGATTGAAAAGCTTTTGAATGGTTTTGCACTACAATTCACTAGCAAAACTAATTTATGGGCTTTTCACCTTTTTTTTAATCCCTCGGGAAGAAAGGTTTTCTGCTAGGTAACTTTTAAGGAGAGAAGCTGTTATCTCAGTCCGAGGGAAATTGTTGTTAAGACGACAGAAGAATAGGTTGGCGGGTTTTGGGATTCCAAGTGAATTTGCTTTTAGAAGTGTTGATTTGTTTATTTCAAGGCTAGTGATGGTAAGTGAGTCTTTTTGAACATGTTTTTCTTTGTATTCATGTAGGGATAACCTCGAGAAGTGTCAGCAGGAGTGGCCATGACATCAGCTCAGCTAGCAGGAACTCATCAGCCTCCATATCCGTCACTTCTCGGAGTGAAGGTGAAATCTTGCAATCATCCAACTTGAAAAGCTTCAGCTATAATGAGCTAAGAGTCGCCACAAGAAATTTCCGCCCAGATAGTGTCTTGGGGGAGGGTGGGTTTGGTTCAGTTTTTAAGGGCTGGATTGATGAACATTCACTTACTGCTACCAAACCGGGAATAGGCATGATTGTTGCTGTGAAGAAGCTTAACCAAGATGGGTTCCAGGGTCACAGAGAATGGTTGGTAAGTATCAGTTGAATTATTTGCTTGATACTTAACGTTGACATAAAATTTCATTGCATATTAACAAAATTCTAGGCAACTGCAAGCATTTTTGGATACTCCTTCTTTTTGCCTGCCTGATTCTGTGAGGGGTATTTTTAGTAGAACTTGACTTTGACACTGAAGTTCTACCAATTCCCAAGTTGCATAATTTTTGACGTCCTCTTCTTTTGCAATGTTTGTCTCAGGCTGAAATCAACTATCTTGGGCAACTGCAGCATCCTAATCTTGTCAAGTTAATAGGATACTGCTTTGAGGATGAGCATCGGCTTTTGGTTTACGAATTCATGCCTAAGGGTAGCATGGAAAATCATCTTTTTAGAAGTTAGTACCTTCTACTTTAGTTGAAAGCATGATTCTTTATTCCTTTATTCCTTTTTGTTTGTACTCCTTTAAAGAAATTTTCATTTTCCTGAATATTAATTAATAATGTTAAATTTAATCCTGAGTTCTAATAATAATGTTGCTTGAAATAATCATAAATACAGGAGGTTCTTACTTTCAGCCATTCTCATGGAGTTTGCGACTGAAAATAGCTCTTGGGGCTGCGAAGGGCCTTGCTTTTCTTCACAGTACAGAAGCTAAAGTCATATATCGTGACTTTAAAACTTCAAATATCCTACTTGATACAGTACGTGCATAATTGGAACTTGAGCATTTCTTGTTATGGTTGAAAATTGGTCGATTTAGAGTTGATCACTGGGTTGCTTCATGTTGCTTTGCAGCATTATAACGCCAAACTTTCTGATTTTGGGTTGGCCAGAGATGGTCCAACTGGTGATAAAAGCCATGTCTCTACCAGGGTCATGGGAACCCGAGGATATGCGGCTCCAGAGTATTTAGCTACAGGTATCAATCATAGTGTTTGTCAAATTGCCCTCCTAGCATTGATTTCACCCTAATGTATGCTGTTTTGATTGATAACCTATATTATTACATAAATAAGATTGTGCCTACTTTCTTAGTCTAGTTACTAAGTTTTCTAAAGCGATCTTTACACTTTATTCTATCAGTAGAATTGTTACTATTTTTTAGGATCCATTTGCTAGGTGTATTTTTTCAGAATGCCAATAACCATGGTTTTCTCCAAATTTGTTGAAAGTTTCATATATTTTCAATTATCAGTGACAGTGTTTGTTGTCATCTCGTGATTTGTGAATTTACTACATTTGCTCAGCTTAGTTTTTTCATATTAACACGCAAGCCCGAAAGCATTACCTAGAATTTTGTGATCGAAATTTTTATTTTGCTAGGTCATCTCACTGCCAAGAGTGACGTATATAGTTTTGGAGTAGTTCTTCTGGAAATGATATCGGGAAGACGAGCCATAGACAAGAACCAGCCATCTGGGGAGCATAACCTTGTTGAATGGGCAAAACCTTACCTTTCTAATAAACGAAGAGTTTTCCGTATAATGGATCCACGTTTGGAAGGTCAATATTCACATACTCGAGCTCAAGCAGCAGCTGCACTTGCCATGCAATGTCTTTCTGTAGAGTCCAAGTGCAGGCCAACTATGGATGAGGTGGTAAAAGCATTGGAGCAGCTTCAGGAATCAAAGGACATGCAGAGAAAAGGTGCTGATCATAAACATCATCATGTACGCAATTCCGGCCAAGGCCGATCAACCGGCACCCCTGGTGGTGCAGATGTGCCTAGAATTGCTTCTGCTTATCCTAGACCTACAGCTTCTCTCCTTGGCGGTTGATACACTTTTGTGATGCGGCAAGTAGGAAGCAGAATACACAGGATTCAGAGGTTTAGGTCTGGCATGAACCATATTTATGTAAGCAATGTATAGTTTGCTTTATTTCTGTTATATTTTGTGCTATATATAGATTTTTTTTGCTGTTGTGGTCCTGATTGTTAGACATGCAAGAGTCTAATGTGGATCCTTGAGATTATGGTGTTCATTAATTTTGAACCCTGCAGAAATTTGCAACACTGCCCATGTGGTTTATGCTCTTCATATTTATCTTTTGCATTAAATATGTGAAAAAGTCTTGATAATGTTGACTACCTGACATTCCTCCCC