Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19574 LG5 9261290 9263302 PREDICTED: L-type lectin-domain containing receptor kinase IV.1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to bacterium, pollen development, defense response to bacterium, protein phosphorylation, defense response to bacterium, defense response to oomycetes, defense response to bacterium, protein phosphorylation, protein phosphorylation, defense response to oomycetes, defense response to bacterium, defense response to oomycetes, defense response to bacterium
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, extracellular region, cytosol
Molecular Function   enables   kinase activity, transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity
SNP Position Effect Amino acid change
C/T 9261294 missense_variant p.Arg549His
G/A 9261686 synonymous_variant p.Cys418Cys
G/A 9261794 synonymous_variant p.His382His
A/C 9261914 intron_variant
A/T 9261915 intron_variant
G/T 9262096 intron_variant
T/A 9262188 missense_variant p.Lys372Met
T/A 9262226 missense_variant p.Lys359Asn
T/A 9263129 missense_variant p.Gln58His
T/G 9263133 missense_variant p.Gln57Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19574.1
MFFKVVTVVFVLATTVAGEDSVSFSYNGFRSSPHLYLDGGAELTSGGMLKLTNYTRQQKGHAFFPSPIDFKNTSNGSASSFSTSFVFAISSEYPNLSGHGIVFVVSPTKGLPNSLPSQYLGLFDNINNGNTSNHVFGVELDTIQNTEFGDINDNHVGIDVNELKSVKSAPAGYYSVGEVKNLSLISGYPMQLWVEYDGLKKQIDVTLAPINIGKPERPLLSLSKDLSPILNNGMYVGFSSSTGSIRSYHYILGWSFKVNGQAQQLAISELPTLPRRGSKKQSKVLIIVLPIIISLSLVIVGVTVAVVHVMKRKKFTELLEDWEQDYGPHRFKYKDLSLATKGFREKELLGSGGFGRVYKGVMPISKLEVAVKKHGSDPHTTHVVGTLGYLAPEHTRTGKATTNSDVFAFGAFMLEVVCGRRPIEQVGCSGSEILVDWVYNCWKRGEILEARDPNLGTNYKAEEVELVLKLALLCSHSDPSARPSMRQVVQYLEKDVPLPDLSLLSLSSTGLRFGLHEDFQDCPMSYPSSMDRPISRTSSVAESLLSGGR*


CDS Sequence:
>Vu_19574.1
ATGTTTTTCAAGGTTGTAACAGTGGTGTTTGTGCTGGCAACAACAGTGGCTGGTGAAGATTCCGTGAGTTTCTCCTATAATGGGTTCCGGTCATCACCTCATTTGTATCTTGACGGCGGTGCTGAGTTGACCTCCGGTGGCATGCTTAAACTCACCAACTACACCAGGCAACAAAAGGGTCATGCTTTCTTCCCAAGTCCAATAGACTTCAAGAACACCTCAAATGGAAGTGCATCTTCTTTCTCCACCTCCTTTGTGTTTGCCATAAGTTCTGAGTATCCGAATTTGAGTGGTCATGGGATTGTTTTTGTGGTCTCTCCAACAAAAGGGCTTCCAAATTCTCTGCCAAGCCAGTACCTTGGCCTGTTTGATAACATCAATAATGGCAACACCAGCAACCATGTTTTTGGGGTGGAGCTTGATACCATTCAGAACACTGAATTTGGTGATATCAATGACAACCATGTTGGAATTGATGTCAACGAATTGAAGTCGGTTAAGTCAGCCCCTGCAGGATATTACAGTGTCGGGGAGGTTAAGAATTTGAGTCTGATCAGTGGCTACCCAATGCAGTTATGGGTGGAATATGATGGCCTAAAGAAGCAGATTGATGTTACTTTAGCTCCAATAAACATCGGCAAACCAGAAAGGCCTTTGTTATCTTTAAGCAAAGATCTTTCTCCAATTCTTAACAATGGCATGTACGTTGGATTCTCATCCTCAACTGGGTCAATTCGAAGTTATCATTATATTTTGGGTTGGAGCTTCAAGGTGAATGGCCAGGCTCAACAACTTGCCATCTCTGAACTCCCCACACTACCTAGACGAGGCAGTAAAAAACAGTCTAAGGTTCTTATTATTGTTTTGCCAATCATCATATCACTCAGTTTGGTCATCGTGGGGGTGACTGTTGCAGTTGTTCATGTCATGAAAAGGAAGAAGTTCACGGAGCTGCTTGAAGATTGGGAGCAAGACTATGGTCCTCATAGGTTCAAGTACAAAGATCTTAGCCTGGCAACAAAGGGGTTCAGGGAGAAGGAGCTATTGGGAAGCGGTGGATTTGGCAGAGTGTACAAAGGTGTGATGCCAATTTCAAAACTTGAGGTTGCAGTGAAGAAGCATGGAAGTGACCCTCACACTACTCACGTGGTTGGAACACTTGGGTACCTAGCACCAGAGCACACTAGAACAGGTAAGGCCACTACAAACTCTGATGTGTTTGCTTTTGGTGCATTTATGCTAGAGGTTGTTTGCGGAAGAAGGCCAATAGAGCAAGTGGGGTGTTCTGGGAGTGAAATTCTGGTTGATTGGGTGTATAATTGTTGGAAAAGAGGTGAGATTCTTGAGGCAAGGGATCCAAATTTGGGCACAAATTATAAGGCAGAGGAGGTGGAGTTGGTGCTGAAACTAGCTTTGTTGTGCTCGCATTCAGATCCTTCAGCTAGACCAAGCATGCGCCAAGTTGTTCAGTACTTGGAGAAGGATGTGCCTCTGCCAGACTTGTCTTTGCTTAGCTTATCTTCCACCGGCTTAAGATTTGGTCTGCATGAAGACTTTCAGGATTGTCCAATGTCTTATCCTTCGTCCATGGATAGGCCAATCTCTCGCACTTCTTCAGTTGCTGAATCACTTCTCTCTGGTGGACGTTGA


Promoter Sequence:
>Vu_19574::LG5:9263302-9265302(-)
TATCTTCAGTGACTTTAATGGGAAAACTTTTTTATATATTATGTCATCTAACCTGTTTCACATAAAATAAAATATTTATGGTTCAGTAAGTATTGTTCTACGAAAAATACTCTCATTTTTCGGATAATAGGAAACTTTCATAAATAGAATATTGCTAACACACTACTAAACTGTTTAAAAGAGTTCATTAGAGAAAATATACATTAGGATATATTGTAAATAAAAAACTAATAATTCTAAAAATAATGTAATTAAAATGAATAATGTATATATATATATATATATATATATATATATATATATATATATATATATATATATCATGTTTTGCTGTAAAAAACATGATCATATTTTAATCTTTAATTACTTAATTCTTCAATATTAAGAAATTTGATTGATCTAATTAACAGTAATAAACTTTTCTAAATTTATATTGTTTCTGAAAGTTATTCTTCCTCACCATTAACATTACCCTCTTTCATCTTTGTGAATAAATTATAACTTAAATATACTTTTAGTTTATATGCAAAATTTGTATTATTTTTTAATTTTGATACATTTTTTAATTTTTAAATATTAAAAAATGAATATAATTATTTTAATTTAATTAAGTTATTTTTTATGTGTTAAATACATTAATAAAAATATATTAAATTATATAAATAATTTAAATAATAACGTGAAACGTGTTTAATATATCAAAAAATTTTAATGTAAATTAAAATCACTATATTCATTTATTTTTAGAATTTTAAGATCATATTTTATGAAAAAAACAAATTCTAATTTCATACATACTAAAAACATTTAATCCATTAATTATTATAAATACTTTAATTTAAGCACTGAGAGAGGGAAAACATGAGAAAAAGTATTAAAAGACGAAAATTTTGAATGAAAAAGAAAGCATGAAAATCCATCGAAGACAATCCAAAGCTAACAAAGAAACAAAATTGATAAATTACCCTTTTAATACACTACATTTTGTTCATGTACAAATAAAGTTGTTTACTGAGGAAGGAAAAGCTATATTTATTAAATCAGAGTGGAAAATACAACCAAACTTAAAATTCAGAGAGATAAAGTGTTTTTTTACCCAATATTTTGAATTGCTTCTTAAATGAAATGTTTTGTTTTTTATTCTAACATAACATTTTAAATTTTGTTACAGTGGAACTTATTCAATGAAATTGAAGTATGAAAGTTTTGAAATTTAAGCGCCATGAAAGTGAGAAGCAACTTTATTTTACTCACAAGATGCTTATGAAGCAATAAAAAGGCTTTATTCCTGTTTCTTTATTTTTTTTTTTTTTCTCTTTTTCTCTTTATCTTTTCCACCCTTCTTCTGTCACTTTTTTTCCTGCCAAAATACAAAAAACGTACTGTACACATATCACCCGCAAAGAGAGGGTCCCTACTCACCTCTTTGTCACATAGTAATTGACTCTACTCACAAACTTCGATATAAGGAACTTTCCAGAAACAATTTCTCATCTTTCTCCTTAATGGCTACAATTTTTATTATTTAAGGTAACATAGTAAAATAACGTTAACTAATAACATTGAGAATGTTACGTGGCAAATATTGAATTGTTCCAATGTTCCATAATCAGTAATGAAGTAGTCGTTTTCTCCGTGATGTCTGTTTATTATGCACCAAAAGGTAATAACTATGTTTGTGAATTAAATAATAGACATACAATTTTGAAAAAAAATGAAAGTAAACAGAGAAAGTGAAAGTGATGTATCTGATTTTTTGCGTTGTTTGTAATCTTTAACTTTTGCAATCTCAAATCTTGAATTTCTCGTTTAACACCTAGAGACGCAACTGTGAGGGAGGTTCGTTTTCTTCGCAGTGAAAGTGCCAGGATCTTTCCTCGTGGACCACAATTGAAAGTTCAAATGTGTGGTACACGTTTTGGGCGGTTGAGAAAACATAGAAACAAACGAGAAATTTAGCCTTTGCCAGAAGGAAACGAATTTCTGAAACATAGAAGACC


Gene Sequence:
>Vu_19574(-)
ATGTTTTTCAAGGTTGTAACAGTGGTGTTTGTGCTGGCAACAACAGTGGCTGGTGAAGATTCCGTGAGTTTCTCCTATAATGGGTTCCGGTCATCACCTCATTTGTATCTTGACGGCGGTGCTGAGTTGACCTCCGGTGGCATGCTTAAACTCACCAACTACACCAGGCAACAAAAGGGTCATGCTTTCTTCCCAAGTCCAATAGACTTCAAGAACACCTCAAATGGAAGTGCATCTTCTTTCTCCACCTCCTTTGTGTTTGCCATAAGTTCTGAGTATCCGAATTTGAGTGGTCATGGGATTGTTTTTGTGGTCTCTCCAACAAAAGGGCTTCCAAATTCTCTGCCAAGCCAGTACCTTGGCCTGTTTGATAACATCAATAATGGCAACACCAGCAACCATGTTTTTGGGGTGGAGCTTGATACCATTCAGAACACTGAATTTGGTGATATCAATGACAACCATGTTGGAATTGATGTCAACGAATTGAAGTCGGTTAAGTCAGCCCCTGCAGGATATTACAGTGTCGGGGAGGTTAAGAATTTGAGTCTGATCAGTGGCTACCCAATGCAGTTATGGGTGGAATATGATGGCCTAAAGAAGCAGATTGATGTTACTTTAGCTCCAATAAACATCGGCAAACCAGAAAGGCCTTTGTTATCTTTAAGCAAAGATCTTTCTCCAATTCTTAACAATGGCATGTACGTTGGATTCTCATCCTCAACTGGGTCAATTCGAAGTTATCATTATATTTTGGGTTGGAGCTTCAAGGTGAATGGCCAGGCTCAACAACTTGCCATCTCTGAACTCCCCACACTACCTAGACGAGGCAGTAAAAAACAGTCTAAGGTTCTTATTATTGTTTTGCCAATCATCATATCACTCAGTTTGGTCATCGTGGGGGTGACTGTTGCAGTTGTTCATGTCATGAAAAGGAAGAAGTTCACGGAGCTGCTTGAAGATTGGGAGCAAGACTATGGTCCTCATAGGTTCAAGTACAAAGATCTTAGCCTGGCAACAAAGGGGTTCAGGGAGAAGGAGCTATTGGGAAGCGGTGGATTTGGCAGAGTGTACAAAGGTGTGATGCCAATTTCAAAACTTGAGGTTGCAGTGAAGAAGGTGTCTCATGAATCAAGACAAGGGATGAGAGAATTTGTGGCAGAAATTGTTAGCATTGGGCGTCTAAGGCACAGGAATTTGGTTCCCCTTCTGGGGTACTGCAGGCGCAAAGGAGAGTTGCTATTGGTCTATGACTACATGCCAAATGGAAGCCTTGACAAGTATCTCTATAACAAACCAAGAGTGACCCTAAATTGGAGCCAGAGATTTAGAATCACCAAAGGGGTTGCTTCAGGTCTGCTTTATCTACACGAGGAATGGGAGCAAGTTGTGGTCCACAGAGACATTAAGGCTAGTAATGTGCTACTTGATGCCCAATTGAATGGTAGATTAGGGGACTTTGGTCTTTCAAGATTGTATGAGCATGGAAGTGACCCTCACACTACTCACGTGGTTGGAACACTTGGGTACCTAGCACCAGAGCACACTAGAACAGGTAAGGCCACTACAAACTCTGATGTGTTTGCTTTTGGTGCATTTATGCTAGAGGTTGTTTGCGGAAGAAGGCCAATAGAGCAAGTGGGGTGTTCTGGGAGTGAAATTCTGGTTGATTGGGTGTATAATTGTTGGAAAAGAGGTGAGATTCTTGAGGCAAGGGATCCAAATTTGGGCACAAATTATAAGGCAGAGGAGGTGGAGTTGGTGCTGAAACTAGCTTTGTTGTGCTCGCATTCAGATCCTTCAGCTAGACCAAGCATGCGCCAAGTTGTTCAGTACTTGGAGAAGGATGTGCCTCTGCCAGACTTGTCTTTGCTTAGCTTATCTTCCACCGGCTTAAGATTTGGTCTGCATGAAGACTTTCAGGATTGTCCAATGTCTTATCCTTCGTCCATGGATAGGCCAATCTCTCGCACTTCTTCAGTTGCTGAATCACTTCTCTCTGGTGGACGTTGA