Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19805 LG5 13118295 13121570 PREDICTED: myb-related protein 305-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to jasmonic acid, jasmonic acid mediated signaling pathway, stamen development, stamen development, stamen development, stamen filament development, stamen filament development, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, stamen development, regulation of transcription, DNA-templated, gibberellic acid mediated signaling pathway, stamen filament development, stamen development, stamen development, regulation of transcription, DNA-templated, stamen filament development, regulation of transcription, DNA-templated, gibberellic acid mediated signaling pathway, gibberellic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, regulation of transcription, DNA-templated, stamen development, stamen development, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to jasmonic acid, jasmonic acid mediated signaling pathway, gibberellic acid mediated signaling pathway, jasmonic acid mediated signaling pathway
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, protein binding, protein binding, sequence-specific DNA binding, sequence-specific DNA binding, protein binding, protein binding, protein binding, promoter-specific chromatin binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/A 13118575 stop_gained p.Gly109*
G/T 13118971 intron_variant
G/A 13119000 intron_variant
C/A 13119007 intron_variant
T/G 13119014 intron_variant
A/G 13119017 intron_variant
C/G 13119022 intron_variant
A/T 13119026 intron_variant
A/G 13119030 intron_variant
T/C 13119191 intron_variant
T/C 13119197 intron_variant
T/C 13119616 intron_variant
C/G 13119620 intron_variant
G/A 13119834 intron_variant
A/G 13119838 intron_variant
T/A 13120157 intron_variant
G/T 13120179 intron_variant
T/G 13120241 intron_variant
T/A 13120320 intron_variant
G/T 13120354 intron_variant
C/G 13120460 intron_variant
T/C 13120621 intron_variant
C/A 13120649 intron_variant
A/G 13120779 intron_variant
C/T 13121036 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19805.1
MDKKQCNTSQDPEVRKGPWTMEEDLILINYISNHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKQAENSQQQSNSNSEINDHQASTSQVSTMAEPMETYSSPCYQGMLEPFSTQFPNIPDQSSCCTNENNNYWSMEDIWSMQLLNGD*


CDS Sequence:
>Vu_19805.1
ATGGATAAAAAACAGTGCAATACGTCTCAAGATCCTGAAGTGAGAAAAGGGCCATGGACAATGGAAGAAGATTTGATCTTGATCAACTATATTTCGAACCACGGGGAAGGTGTTTGGAACTCTTTGGCCAAAGCTGCCGGTCTTAAACGTACTGGAAAGAGTTGCCGACTTAGGTGGCTAAACTACCTCCGTCCTGATGTTAGAAGAGGGAATATTACACCCGAGGAACAACTTTTAATCATGGAGCTTCACGCAAAGTGGGGAAACAGGTGGTCAAAAATTGCCAAGCATCTACCAGGAAGGACTGATAATGAGATAAAAAACTACTGGAGGACCAGGATTCAGAAGCACATCAAGCAAGCCGAGAACTCTCAGCAACAGAGTAATTCTAATTCTGAGATAAATGACCATCAAGCTAGCACTAGCCAAGTGTCCACCATGGCTGAGCCCATGGAGACCTACTCTTCACCCTGTTACCAAGGAATGTTAGAGCCATTTTCTACTCAGTTTCCCAATATTCCAGATCAATCCAGTTGTTGTACCAATGAAAACAACAATTATTGGAGCATGGAGGATATCTGGTCAATGCAGTTACTGAACGGGGATTAA


Promoter Sequence:
>Vu_19805::LG5:13121570-13123570(-)
TATATATATATATATATATATATATATATATATATATGTATATATATATATATATATGTATGTATGTATATATTAGTTTAGATCATAAAAAATTAAGGATATATATCATGAATAATTTTTTTGCTAAGAACATATAGAAAAGAAAAATAAGAAAAAAAAGTATAGTATTAGTCGTACATAAATTAATGTGTAAAAATTGGCTTATATAATTTACAATGATATTATATTATTCTTAAAGTTAGAACATGTAACATGCAACCCTAAAATCTAATGCTTCTTCATTTTCAATGAGACCATCAATTTCAGGATAGGAAAAAAACATTAAATTTAGAATGAAATTATTCTAAAGGATGACATTAATGTTAAGATATAAGTTCCCTATCATTTATTAACATCTTTATTTCGACTTTTTCCTAAACTAACTTTGGCTTACCAGGAGTTCATTTTACTTTCTTATTTTTTTATGAAAAAAATCATCCAAACATTTCACTAAACTTATTAAAATAAATATTTTGTTCAAGTAGGCGATGATATATATAACGAACTTTAAATTTTACTGAAGATAATTCGGCCAAGGGGCCTAGGGCTATGGTGTGAACTATCTACTAAAAGGTATTTAATTTTAGAGTTAAATAATATTTTTGGACACAAGAATTTATCTTTATCCAATTTTAAAACTGAATAAATATAATCCTTTTAATTCAATAATGTTAATTTTATTTATCTATTAAATGATATTTCAATAAGACATTTGTGTTGCAATATGACCTTATTTAATAAATTAATATATTTAAGTTAAGAGAATTATATATATTTATTTTTAAAGTTTGAGAATCGCATTAAAATTTGAGATAAAAATTATTTTCAATTTCACCTAATTTAACTCTTAACTTTCTATTCTCATGGCTATCGTCCTTGATATATAAGGAACTCCAATGGAGAATAGTTTAAAACATAAGTTGGACCTTAATGTTAATTTAAGGTATAACAACCAGGATACTAAAAACCAGACAGCTTCAAAAGAACTAAAGAACGAAATAAAAACTTCAAATTTTATTTGTTAATATATGAGAGATATACACGTGTATACATCTTTATTTGATGGAGTAAGTATTATAAATTAATTCAAAGGGAGAAACCATACTGCAATTTGTTTAAGAATGCAAAAAATTCTGGTATATGAAATTGTGGTGAATATAAAATGGTCTTTACAAACAACGTCTTCAAATTTGTAGAGTTGGCAACTTTACTTTTGTTCAATAGGTCAATTTGAACAATCTGAAATAAACTTTTCTACTTTAAATACTCATGGGTAAACTCATCGATACCGTATTGTACTTTTCAAATATGTAGTGTAGAGATGAAGTGTGGTGGGTCAGATTTTAGGGTTATAATATAAACCACAATTCCAACTCATTATTTTCATTGTTTGCATGGTATTGGATTCCGCTTTAACATAATCTACTTTCAGGGCGAAAGTTTTGAAGAAAAATATTTTAAAATGAGCCAGGGGGCCAACTTTTTTGTTCGCATGGGATGATGTAACCATGGTGACAGATAACTTGAAAATTTTCAAGTCTATTATGTTCTTTTCTTTGTATTATAATCCCTAAACTGCACTAATTGTTTAATAGCACAGGGCTAAAAATATTTATGAAATATCTACAATCCTCTCGTGTTTTGGTAAAAAAAATGAGTATAGACACCTGATATGATCTAGTGCATGTGCGTGACTTAAGAGTACGTAGTGACACTATTCTATTAAGTTTTAGTTTTGCCAAAGGAAACCAAAAACATAGTCATGCATGCATGTGTTAACATGATAAACACAGTTAGGTACGTAAAATCTAGTTAACCCTAATAGAAAATTTCATTAAAATTAACACATTATTTATTCTTGCCTCTATTTAAACACTCCAACCCCCATTATTAAGTTATCGGTATTTCTCTTTCTTCCTCTTCCCCACCCCATCTTTCTCTCTATCACAAACAAAAACAAA


Gene Sequence:
>Vu_19805(-)
ATGGATAAAAAACAGTGCAATACGTCTCAAGATCCTGAAGTGAGAAAAGGGCCATGGACAATGGAAGAAGATTTGATCTTGATCAACTATATTTCGAACCACGGGGAAGGTGTTTGGAACTCTTTGGCCAAAGCTGCCGGTAAGCATATTTTTTGTTCTTCAACTTTTATTATTCTTTGAGAATTATAATTTTATATTTTTTTTCATTCATACTTAAACCCCAGGGTGGGAGAAAACGATTCATGATTATGCATGATATAACAGGTCTTAAACGTACTGGAAAGAGTTGCCGACTTAGGTGGCTAAACTACCTCCGTCCTGATGTTAGAAGAGGGAATATTACACCCGAGGAACAACTTTTAATCATGGAGCTTCACGCAAAGTGGGGAAACAGGTAATTTTTTAACATGTTTTCTTAATTAATATGATGAAATTGACAAAGGAAACAAAGATCTTTTATTATTTCAAATAAATTATATTTCACCCAGAAATTATATAATTTTGTGAACCATTGTTTATTTTCTAACCATTAAAGAAGTTTTTTTGCTTTCTTTTAAGTTGTAGTATTTGGTTTGGAGGCAATCGAACTAGAAGGCCCGTGAGTTCAATAGTCTTGGAAGACTATATTTGAGGGGGATCGAGGGAGTGTAGTCGGGGAGAAAACTCTAGCCAAGGGAAAGGTTTAAACATATGCGGGTTTGTAGAACTTTTTTCCACAAATATATATATCTATATATATATATATATATATATATATATATATATATATATATATATCTTTGATAAAACTGTATTTAATTGTTTTAGAGCCTTCAAAATCATTGTGTTCGATTGCCTCCAAATCAACGAATTGGACTGTTTTCCTTTGAAGGGTACATATTATGCATCAATCCTTACTGTTGCATTAATCCTCGCCCTAGCGCCCCCTCTCTCCTATATATGTATGCATATCTCAGGCGGGAGAGAGGTCCTTTAGATCTAACAATAATCACCACCAGTTAATCAACACCAGCGTTCTTCTTCTCCACATGATCTTCAATTCTGTGCTTTTATTTTAATTTTTCATGATGTCTGTTAATTGGAGGAAGGTTTTCATTTTTTTGTCAAATTGTAGGATAATTTTTTAATTTCTAATTATTCGTGTAAAAGTTGCAGGTGAATGAATTAGCTGCGTGGAAGATTCTTTATATTTATTTTCAACTGAACATAAATCATACTATGATCTTTTTTATTTTCATCACATATATATAAAATCTAAAGTAGATGATGAATATAAAAGTACCCATTTTAATTATAAGAAAAGTCATATATTGTGTTAAAAGCGCATGAATACCAGCTTTTAAACGAATAAAAAAAAGATGACGTAAGGGTTTTGGACATAAGATAGAAAACTTGTTGATGATAGTAAAATATATGAAGGTTGGAAAAGGGGGATGAATTGCATATGAAAAGACGAGAAAATCGGGTATAAGTAGTAAAGTTAAAAGAGATTACCTCAAAGAAGAAATATGGTATTAGAAGTTGTTTCTGAATAGTTAGTAGCATTAAGTATATGTAAAGGTGTTTTAATTTTGAAAAGCGGCATATAGTTTTACAAATGACTATTTCTACAAGGCTTATGGGGAGGACTAAATAAGTTGGACAAGAGGACCTTCCACTTTGGGTTGAACTCATGGAAGTGCGCATATCTTTATAGCTTTCTAGTTCGGATGAAAGAGAGTTTGAGTGAAAATAGACCCAAATCATACACTTTTGGCTCTTCTTAACAAGGGCAGGTGTCCTTGTAAATTTTAGAGCCTCCCCTTGAAGATAGACTTACATAGTGCATATATAAACTGAGGATATACTTACATAGTGCATATAATAACTAGTTAGCACCATCCTTGCTTTCTCAGTATCGAAATTGCCTCTCAACCAAGAAAACAAACGATCAACAATAAAAGTGGAAAAGAAAATATTTAACCTAACTAAGTTTTCAAATATTGCATTTACTATGTATAACAAAAATGAATAGTATTATTAATGAGGCGCGCATTCAGATGTGCCTTTTTTTGAAATAAGCAAGATGAGTTTATAGTCAAACAAATTAATGACGCAAATTATTAAAAGAAACGAAGGTGACGCGATTAAGAGTTGCTAGAAAATTTGTATGCGTGCGTATGTATGCGTGTATGTATGAAGAAGGGATATGGATGGAAAAGAGAATAGGAGACGTTTCGATTGAACCATACTCTCTCTAGTCTCTACCTGAGGCATGCTTTGAGAAACCTGATTTTCTGTTCTTAGAGAACCCTTGCTACAAAGCAAGGGAATTATCTTCATACAGCAAAGGAAATTTAGCATCTTACGTACCTCAACACTGGTCGATTTATAAGTGTGAGTCCAAGATAACGTCACATTGATTCTCAGCCATGGAACATGGCTTCCATCAGACTCACAACCGTATTTAATATAGGTGTTGCCACTTTTTAGTTAATCAATAAAAGCTGTGGCAGTCATATATATAGGCAGTTTTTAATTACATTTCTACTAATGCTTTATATTTCAAGCAAATTAAACAAATGTTTTATCTTACTCTCACTCATGCACACTCGTGTACCCTCTTTTCCACAACGCATTTCTACAACCGACTAGCATTCTAGGTTTTCGTTCTGCTTCTCCGATACTGTCATGAATAGAACCATACTTATCAAATTGTTTTGTATAGTTTTCTAAAACAAGTGATTAAAAGCAACAAAGTTTTTATGTAAAAAGCAAATTCTTATCCTGTTGGTTGGTTTAATTAGAGTACAAAGTTTTTTCTTTCACACTGTTTAGTCATCGTATTAAAATGTTAAGGTTCCAAAATTTTTTACAGCCAAAGCGTTAAAAAACCAGTAGGGTACTATTCAGTTACATGACACTGTCTTCTAGAAATAAATCATTCACCAATGCAGGTGGTCAAAAATTGCCAAGCATCTACCAGGAAGGACTGATAATGAGATAAAAAACTACTGGAGGACCAGGATTCAGAAGCACATCAAGCAAGCCGAGAACTCTCAGCAACAGAGTAATTCTAATTCTGAGATAAATGACCATCAAGCTAGCACTAGCCAAGTGTCCACCATGGCTGAGCCCATGGAGACCTACTCTTCACCCTGTTACCAAGGAATGTTAGAGCCATTTTCTACTCAGTTTCCCAATATTCCAGATCAATCCAGTTGTTGTACCAATGAAAACAACAATTATTGGAGCATGGAGGATATCTGGTCAATGCAGTTACTGAACGGGGATTAA