Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19901 LG5 14772298 14776855 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   vegetative to reproductive phase transition of meristem, embryo development ending in seed dormancy, negative regulation of gibberellin biosynthetic process, plant organ development, somatic embryogenesis, embryo development ending in seed dormancy, somatic embryogenesis, negative regulation of gibberellin biosynthetic process, positive regulation of abscisic acid-activated signaling pathway, embryo development ending in seed dormancy, negative regulation of gibberellin biosynthetic process, regulation of embryonic development, embryo development ending in seed dormancy, regulation of embryonic development, plant organ development, negative regulation of gibberellin biosynthetic process, positive regulation of cell population proliferation, negative regulation of gibberellin biosynthetic process, vegetative to reproductive phase transition of meristem, embryo development ending in seed dormancy, negative regulation of gibberellin biosynthetic process, embryo development ending in seed dormancy, embryo development ending in seed dormancy, positive regulation of abscisic acid biosynthetic process, positive regulation of abscisic acid-activated signaling pathway, negative regulation of gibberellin biosynthetic process, response to auxin, positive regulation of abscisic acid-activated signaling pathway, negative regulation of gibberellin biosynthetic process, negative regulation of gibberellin biosynthetic process, somatic embryogenesis, embryo development ending in seed dormancy, positive regulation of abscisic acid biosynthetic process, somatic embryogenesis, positive regulation of abscisic acid-activated signaling pathway, positive regulation of abscisic acid biosynthetic process, vegetative to reproductive phase transition of meristem, positive regulation of abscisic acid biosynthetic process, embryo development ending in seed dormancy, embryo development ending in seed dormancy, response to auxin, vegetative to reproductive phase transition of meristem, negative regulation of gibberellin biosynthetic process, positive regulation of abscisic acid biosynthetic process, positive regulation of abscisic acid-activated signaling pathway, somatic embryogenesis
Cellular Component   located in   nucleus
Molecular Function   enables   kinase binding, DNA binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/A 14775101 splice_region_variant&intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19901.1
MVSKWSAERVWESTYDLRSEATVQVKEQQNPQLYSAARPTGTKNKKTITWFISLPSGQLPFKSNHHVLTSSHSLPHGSLSVNHCTMHKGTPQYCKILKWVVSERAHAMHPSFEGQRENPPSHTPAAILPRRECVWRALSSPMFPVSSPYIRHSLLGYHLTTTITTTTAPTPMRKPNPSRLTLREKLLRKTEACAFVAGVAADLRLVAAPGDIPNTNNVNSITNTTSTSSNVSKSHGSGRIHDANHLGLVAAVTNLGTVHRKKRLPRQRRSTVTTTPTLFLQMHHSDNTLPSKQHDPNFPSSTPSASSSLQSVKPSTPLRLAAREIDHRNLRFLFKKELKNSDVSSLRRMVLPKKAAETFLPPLDSKEGILLKMDDKDGTHAWSFKYRFWPNNNSRMYVLENTGDFVSTHGLRFGDTIMIYQHIENNNYVIQAKKASEEDEFVEQSSETMNDMFPSDLEVNKPGCFNINYPAVNDAGMSFIYETTFSNDSPLDFLGGSMTNFSRIGPADETFGSVENLSLDDFY*


CDS Sequence:
>Vu_19901.1
ATGGTGTCCAAGTGGAGTGCTGAGCGAGTTTGGGAATCCACATATGACCTCAGAAGTGAAGCAACTGTACAAGTAAAGGAACAGCAAAATCCGCAATTATACTCTGCTGCGCGCCCCACAGGCACAAAAAATAAAAAAACAATCACGTGGTTCATATCCCTTCCATCAGGCCAACTTCCATTCAAATCAAATCACCATGTGCTCACCTCATCACACTCTCTGCCACATGGCTCACTCTCAGTGAACCACTGCACCATGCACAAAGGCACTCCACAGTACTGTAAAATACTCAAGTGGGTGGTATCAGAGAGAGCCCATGCAATGCACCCCAGTTTTGAAGGGCAAAGAGAGAACCCTCCCTCCCACACTCCTGCTGCTATTCTACCGAGGAGAGAATGCGTGTGGAGGGCGTTATCGAGCCCCATGTTTCCTGTGTCTTCACCATACATCCGTCACTCCCTGCTTGGCTACCATCTAACCACCACCATCACCACCACAACAGCACCAACCCCTATGCGCAAACCAAACCCATCTCGCTTAACCCTGCGAGAGAAACTGCTTCGCAAAACCGAGGCCTGTGCCTTCGTGGCAGGTGTTGCTGCCGACCTTCGACTTGTCGCCGCCCCAGGAGACATCCCCAACACCAACAACGTTAACAGCATCACCAACACCACCAGCACCAGCAGCAACGTATCTAAATCTCACGGGTCGGGTCGGATCCATGACGCCAACCACCTTGGTCTCGTCGCTGCGGTTACCAACCTTGGAACTGTTCACAGGAAGAAGAGATTGCCCAGGCAGCGAAGATCCACCGTCACCACCACCCCCACCTTGTTTCTCCAGATGCACCACTCCGACAACACTCTCCCCTCTAAGCAGCACGACCCTAATTTTCCATCTTCAACTCCTTCCGCCTCCTCCTCTCTCCAGTCCGTTAAACCCTCCACTCCTCTCCGGCTCGCCGCACGTGAAATCGATCATAGAAACTTGAGGTTCCTTTTCAAAAAGGAGTTAAAGAACAGTGATGTTAGCTCCCTAAGGAGAATGGTATTGCCGAAGAAAGCAGCAGAGACTTTTCTTCCACCGCTGGATTCAAAAGAAGGAATTTTGCTCAAAATGGATGACAAAGATGGTACTCATGCATGGAGTTTCAAGTACAGGTTTTGGCCTAACAACAATAGTAGGATGTACGTACTTGAAAATACCGGAGATTTTGTCAGCACACACGGCCTTCGATTTGGCGATACCATTATGATTTACCAACATATTGAAAACAATAACTATGTTATTCAGGCTAAAAAAGCTTCTGAAGAAGATGAATTTGTGGAACAAAGTAGTGAGACTATGAACGACATGTTCCCGAGTGACTTGGAGGTGAACAAACCAGGTTGTTTCAACATAAACTATCCTGCAGTGAATGATGCTGGCATGTCGTTCATATATGAGACTACTTTCTCAAATGACTCCCCACTTGACTTTTTGGGAGGATCAATGACGAACTTTTCAAGGATTGGACCAGCTGATGAAACCTTTGGTTCTGTTGAAAATTTGTCCCTTGATGACTTCTATTAA


Promoter Sequence:
>Vu_19901::LG5:14776855-14778855(-)
TTTTTGTAGTGTCAAAGGTCAAGTTTTTCTTTCATCCTTCCATTTTTATTTCATTTATTCTCTTTATTTCAATTCCTTGTGTTTCTTTTTAGTTGTGAGAGTTTCCATAATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTTTATGTCATTCTCTTTTCTTGAATTTGGGTGCAAGTACTATAAAAATTTTATTTTTTTTTGTCATTGAAAATATATGACTTTGAAGTAAAAAAAAAATCACCTTATTGTTGTTTTATTTATTAAATATTAGCTAGTTAGATTTCAATAACCTATCTAGGTGAGTTAGTGATATGATGGAAAGGGTAGAAAAGAAATCTATCAACTCATAAGGTGTTAGAGAATATAAAACCCCATAAAAAATTATGATAAGTTTGTTGAAGCATCATCATGGCTGTGACACTTCATTCAATTTTTATTCCATTCATTCAACTTTAAGTATTAAAAAAAAGTTTGATCTTATTTATTAGTATAGAATTTTAGCCAAAAAAGAATTAAATGAGTTTTAATCAACACGAATACAATAAAAGGATTGAGAATCCACAAGTAATTATGACGTGAAGTGTAGAATAATACTAATATTTGAATTAAATTAATATGTAACATCTTATATTAAGATAAAATTAACTCTTTAATCTTAGTTTAGTACATAAATAACCTTAAAGATGGGGAGACATGGTGGAAAGTATACCAAAAAAACTACTTCATTGTGTCTTTTTTCTTTTTATTTTTATCTCCTCCTGATTTTAAGTTGTTTTCATCCCTACATGTGTTCACTAGTTTTGCAAACTATACGTATAACAAAAAAACTATGTTTATTTCTTTCATATACAAAAACTCCTAATGTTATTGATGCATGATGAGTAAAGGAAAATAAATTATGAAAATAAATAATGAAAATAAATATTATTATATTACAAAAATAAGATGCTTTGAATTAATGCAATTCATTCTATGAATGTGAACATGGTAGATATGTAGTTACATCTCCATTCTTTCTATGACTGAAGAACCATTCAGTGGCCACTGCTTTCTGCAAGTTTCCGCGTAGAATTGACATTAATTGGATGGTAATAGCTACATTAAATAGTTTTTGGAAATTTCTTCACATTCATAGGAAGCCAACTGAGATAAAAAAAATACAAAAGAAGAGTTAAAGATTAAAGAGAAAAACCAATCCACTCTAAATAATTAAATAATCAGTAATTACAATTTTCAATCTAAAGACAATCACCTGTTCAATCTTACGCGTCATTCAATAATCCAATAACTTTCATTTGCATAATTACAATGCACACAACTTAGAGATAAAGTTCGGAAATAATCATTGAGGTACTTTTCAATTACCAGTTTTCCAATAAAAAAATATTTATTTTTATTTGTTATTTGAAGATTTTAAAGTAACTAATTTTTTTAATTGTTTGCTGAATTTAATTAATCTAAAGAGAAAAAGATCATTTATGATAACAGAGAAAGAAGATATAATAGCACATAAATGTACATTGAATAAAAAAACTGAAAAAGAGTAAACTTAAAACAAATTAAACGATTTTCCTTATTTAAAAGAGAAAATTTAGTTATAAATAAACACAGGAAGAATACATGGGTAAAAAATTGAAAGAATTAAAATCTAGCATTAATTTATCTTAACTAATCTAAAGGGTGTGTAAGAAAAACTGATCTAAAAGGTAAAAAAAAAAGATTGGAAGTAATTGTAATATTTAGTTTGGAAAATAGTTGAGTCGACAGGGAAACGGTGGTAGGTATGTGGCGAAGAAAAGTCAAACGAATGAGTGTTGCTGTTTCTCCTGCAGAATTGATGAGTGAAAATGGCCTTAAAAGATGTTTGGGGAGGGATTTGGAGCAAGTGGGAAGAGATAAAAGCAAAAGGGTATTAATAAGAAAGCTTAGTTGAAGTTAATATTATCATTAATTGATTTCTCACAGCACCTGTGC


Gene Sequence:
>Vu_19901(-)
ATGGTGTCCAAGTGGAGTGCTGAGCGAGTTTGGGAATCCACATATGACCTCAGAAGTGAAGCAACTGTACAAGTAAAGGAACAGCAAAATCCGCAATTATACTCTGCTGCGCGCCCCACAGGCACAAAAAATAAAAAAACAATCACGTGGTTCATATCCCTTCCATCAGGCCAACTTCCATTCAAATCAAATCACCATGTGCTCACCTCATCACACTCTCTGCCACATGGCTCACTCTCAGTGAACCACTGCACCATGCACAAAGGCACTCCACAGTACTGTAAAATACTCAAGTGGGTGGTATCAGAGAGAGCCCATGCAATGCACCCCAGTTTTGAAGGGCAAAGAGAGAACCCTCCCTCCCACACTCCTGCTGCTATTCTACCGAGGAGAGAATGCGTGTGAGTGTGTATGAGATAATGTGGTGGTGGGTGGGTGTGGTTGGGTTTATTACAAGATGAAAGAAGGAGAGAGAGAGAGAGATGAAAATGAAAAACGCCATTGATTTCTGTTGTAAGTTTTCAGAACTTTTGCAACAGGTGGAGGGCGTTATCGAGCCCCATGTTTCCTGTGTCTTCACCATACATCCGTCACTCCCTGCTTGGCTACCATCTAACCACCACCATCACCACCACAACAGCACCAACCCCTATGCGCAAACCAAACCCATCTCGCTTAACCCTGGTTTGCACTCACCCCCTATTCACACGCAGCCACATTGTCCTCATTAACTCTCCTCTCTCCCTCCTCCACATTATTGTAAACACCACAAAGCGCCAAAACCAAAACCATCCATGAATCCGCTCTTCACATTTGGTCACCACTCTGATTAACCCACTACCCAACCCATCTACTCAAGAGAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGAAAGAGAGTTCATTATAGTATGGTAAAAGTAAAAGGAAGCAAGGGGAGAGGATGGGGTGAGGCGTGAATGCAGGATAAACAAATGTCATAAAAACCAGACCCTGTAATCCCAAAAATCCTTGCTAAAAATAGAAAAACTCCAAACAAAAAAAAAATTTATGGAGAGAGGATGGGTTGGGGGAAGAGAAGAGTGAAAGATAGTCCACCATTGATCTCTTTAACACCAAACCCCACACCCATTTCGTGATTGCCGAGCGTCGTCCATACCCGACCCTATCTATCTATATCTGCCTGCACACACTCAGACTGAGAGAAAGGGAGCCAACAACTACAGTCACAGAAAACCAAAAGCACTGTGTGTGTCTCTCTAAAACAACCAAAAAAAAAGAAAAAACCCTAAGCTAATGATGATGGATCAGCGACAGCGAGAGAAACTGCTTCGCAAAACCGAGGCCTGTGCCTTCGTGGCAGGTGTTGCTGCCGACCTTCGACTTGTCGCCGCCCCAGGAGACATCCCCAACACCAACAACGTTAACAGCATCACCAACACCACCAGCACCAGCAGCAACGTATCTAAATCTCACGGGTCGGGTCGGATCCATGACGCCAACCACCTTGGTCTCGTCGCTGCGGTTACCAACCTTGGAACTGTTCACAGGAAGAAGAGATTGCCCAGGCAGCGAAGATCCACCGTCACCACCACCCCCACCTTGTTTCTCCAGATGCACCACTCCGACAACACTCTCCCCTCTAAGCAGCACGACCCTAATTTTCCATCTTCAACTCCTTCCGCCTCCTCCTCTCTCCAGTCCGTTAAACCCTCCACTCCTCTCCGGCTCGCCGCACGTGTGAGTCACCCCTTCTCTCCTTTTTTTTTTTTGCGTCTTCCAATTCTTCATTCTCAAGATCTCATCTTATCTTATATACATACCCCCATTCTCAATTGGGTCCTTGCTATGTCCTCGCGATATTGTCTTGCTCGTAATTTTCTAACCCCATTTTCGGATCTCATAAATTAAGTGTCTTTTGCAGTTTTTTTTTTTCGATTTTAAAATCGGTATTTCGTTTTAAGCTTCCCCCCATTTTACACCAATTATCTTCCCTAAACTCCGATTCAAACTCTAAAACATTGAAAAACTATTGCATCGGAGTTTTATTCAACTTTTTGGTGATTTGTTTAGATCTTGTGTTTGTTTGTCTCGTGATTCTCTTCTGCGTATTTAAATGATATTTTTTGTGATAATCTTTTCCAATGCTAAATGCAAAGTTTGTGATAATCTTATATATATAATATTATATATAATAATAATAATAATAATAATAATAAGTATAGTTGAGATTGGTACTATTTCTTTGTTTGAACGGAGTACAAGTTATTTGTTTGATCTTCAATTTGGAAACTGCGACATGGGAAGGGTGAGAATGGAGGGGCAAAAGTGGCAGTGCAGTAAAAAACTGAACTTAGTTTTTTATATTAAAAATTCCCCACCCAAAAAGAGACTAAAAGGAAACAGAATATAAGAAGAACAAGGTTTAGAAAAGAATCTCTTGTTGCGAAAACAAGATAAAAAATGAAATGAGAGTTAAGGCATTTTTTTTTGGACTAATTGAGTAGTGAAATGGAGTCTAAGAACACATAGCGAAACATACTTTGATCTTCTGGCTTACAGCATTGGGAATATTATAAGCCTTGTGTCAGATTGTGTTACCAAAAAAGATATACAAACACACATAAAAAAGAGGCACACTTTTATCACAACGATCATGATGAATATATATATAAGTACGGAATTAGTTTTATATTTGGAAAGGAGCCAAAATAAATTCCATTCGTCTTATATGATTATTTGACAAACATTTGTTGTATTACGGAAAAAGATTAATTGGACTATGTTTCTGTTTTGAGAAACTTTTGCTATAGATGCTAGCTATAGTAAATCCATCTTCAACCTCGGGTCTCCTATTAATTGCAAGATTGCCAAATATAGCACCCCTACATAACAGTACATAGTTACTTCTCTCAATATTAATTAATATCCTTTCTTGGAAGACCAAATTCTTACTTTACATTGTGTAGAAAATTTTAAAAGAAAAAAAAATAAAAACTTATGATTAGTGGATATTGACGGCTCCATATTTGGGAAATTGTGTAAAGACATCATATAAGGCATGCTGGACAATGCTTTGGGTACTCTGCCTTTAGGACTATTAGCATATGGACTTGATGTCCTTATACAGGACATGGTGTCTTTGATGTCTTACACCAGAATTGCATGTTCTGTCACAATTAATTATAGTTTTCTCCATCTTTTAGTGGCTTTTAGGTGAATGTCTATTGCTTTTACCTGAGATTGACAATGGTCTAATTTGGTTTGTGTGCTTCTAGGAAATCGATCATAGAAACTTGAGGTTCCTTTTCAAAAAGGAGTTAAAGAACAGTGATGTTAGCTCCCTAAGGAGAATGGTATTGCCGAAGGTTTGGTCTATATTCAATATTGTCTTAACTTCATTTTTGTCTCATCTTCTTTTCTAATTCCACTATGACCTTAGGATATTAATGACTAAAATAATTGGGAAAGAAATTGTTACTTACAGAAAGCAGCAGAGACTTTTCTTCCACCGCTGGATTCAAAAGAAGGAATTTTGCTCAAAATGGATGACAAAGATGGTACTCATGCATGGAGTTTCAAGTACAGGTCTGCTACATACATATATTGAAGTGTCAGAAAATAAACTAAAGACATCATTTTACGACATTAGTTTTAGTTGTTGAATATGTAATTTAAGGTTGTTTTTTAATTAATTGTTACTGACCATTCAAATTCATAGTTCATTGTATTTGTATTGTATTTGAACAATGCAGGTTTTGGCCTAACAACAATAGTAGGATGTACGTACTTGAAAATACCGGTAAACTTTCTATTCATAGTAATTATTGTCTGACAAGGGCCCCTGAACAGATAAATTTTGAATTTTATAGTAATGAAATTATAATATTGTTGTGTCTAATATTTTCAGGAGATTTTGTCAGCACACACGGCCTTCGATTTGGCGATACCATTATGATTTACCAACATATTGAAAACAATAACTATGTACGTGCCGCCAAAAAAGTTCCATATTATTCATTCTGCCTTATAAAATATACATTTAAATAAAGTTCGTACTTCAAAGTACAATTATGATATCTTTCACTCATTTGAAAAAGTTATAATACTATTTTATTGAAATTTATTTCGGAATTAATATTAAGTTGATTCATATGAAATTTTATAGAATTCTATAATTTTTTTATTTTGTCATGATTCCAATGAAACTTTATACTAAAATATTGCGGTACATTTGGTGTTTTTTTTTTCTTAATCTTACAGGTTATTCAGGCTAAAAAAGCTTCTGAAGAAGATGAATTTGTGGAACAAAGTAGTGAGACTATGAACGACATGTTCCCGAGTGACTTGGAGGTGAACAAACCAGGTTGTTTCAACATAAACTATCCTGCAGTGAATGATGCTGGCATGTCGTTCATATATGAGACTACTTTCTCAAATGACTCCCCACTTGACTTTTTGGGAGGATCAATGACGAACTTTTCAAGGATTGGACCAGCTGATGAAACCTTTGGTTCTGTTGAAAATTTGTCCCTTGATGACTTCTATTAA