Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20648 LG5 25409287 25409763 ethylene-responsive transcription factor 3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, glucosinolate metabolic process, ethylene-activated signaling pathway, negative regulation of transcription, DNA-templated, ethylene-activated signaling pathway, ethylene-activated signaling pathway, glucosinolate metabolic process, regulation of transcription, DNA-templated, glucosinolate metabolic process, regulation of transcription, DNA-templated, ethylene-activated signaling pathway, negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, intracellular anatomical structure
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, DNA binding, protein binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/T 25409680 synonymous_variant p.Pro28Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20648.1
MPAHAPPINKHSPPPPKEAHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDTAARTLRGPKAKTNFTYVVAPAIFAAPESQAPAHDPLARPVEFFGLPLFFTTDADSGAPVRSEYKGYKLENIAGFVVTKEEKKKPFLFDLNQPAPLF*


CDS Sequence:
>Vu_20648.1
ATGCCTGCCCACGCGCCTCCAATCAACAAACACTCTCCGCCGCCGCCCAAAGAGGCCCATTTCAGAGGCGTCCGCAAGCGTCCCTGGGGCCGCTTCGCCGCCGAGATCCGCGATCCCTGGAAAAAGACCAGAAAGTGGCTCGGAACCTTCGACACCGCCGAGGAAGCCGCCAGGGCCTACGACACCGCAGCAAGAACGCTCCGAGGGCCCAAGGCCAAAACCAACTTCACCTACGTCGTTGCTCCTGCGATTTTCGCTGCCCCTGAATCTCAGGCCCCAGCCCATGACCCACTCGCTAGACCGGTCGAGTTCTTCGGCCTTCCCTTGTTCTTCACCACGGATGCAGATTCCGGGGCGCCGGTGAGGTCGGAGTACAAGGGCTACAAATTGGAGAACATTGCCGGATTTGTGGTTACCAAGGAAGAGAAGAAGAAGCCGTTTTTGTTCGACCTTAATCAGCCGGCGCCGCTATTCTGA


Promoter Sequence:
>Vu_20648::LG5:25409763-25411763(-)
ATATTACATACTTAAATAAGAGAGACTCTAAAATAAAAAAACGACCCAAATTTTAACATATTAATATTCAAATTTTGATAAATGACATCTTATAAACAATATTAATACAAGCTACGTTAGATTACATATTAAAAAAAAAACTCTATTAAATCAAAATTAAATATAAAAATAGAAAGAATTGAAAAAATAAATTACTATTTTTTATTAAATGTTTTTATTATTAAGATGTTATATAAATCATCAGTCTTGTATGTTATACTAATGATATATTAAATTTTATGATAGTGTTATCATGTAATATATTAAAAATTACTAAAAAAAATCAACTTGTTATAATTTAATTTTATAATAAATTATTTATAAAATTTCTGAATTATATTTGTAATATCACAAATACGGATAATTGATACTTTAAAAATTAGAAATGTTGTTTCGAAGGTTTATCTATCATCCTTTATATCTATCTTTTACCAAAACGAATATTTACTCATACGAAAATTATGGAGTGAGACTCTGGCACATACAAGAATTTTCTATAACCCATCAATGTGGTGTCACAGACAAGCTAAACGATCAGGCTGTCTATCCCCTAATTATCAGAATCCCATTATTAATGTCACTGTTTAACCAAAAAAATCTGGTTTACAGAAGTTAAAAATACTTTAAGTTTTATCCGTTACTTTTTTTTAGAAAGAAAAAGAATATTTTCTTTGAGTAATTATGAGAGAAAATACTCCATTAAAATAATAAAAGGACGGAGACATTACCTTACCTAGCAGTCAAAATGTAATTAAAGATTGGTTGATTTTGTTGGTCCTCATTCATCTGTGATCTGATGAGAGTACTTTTGATGTTAATTAATGCATCTGATCCTTAGGAATAGGGTTTTTAGGTAGTGTTTGCGTTGCAGCAGCAGCACGGATGGTGGTGGGCCAAAAATTTGGAGTTTTGACGCCATAGAAGGGGAGCACACATACGTAGCAGTAGGCGTAGGTACTAGCAGCAGCAGCTACCCTTTGGGTTACATATTCTGCTTTCTTCAGTCAGGTGAGTGACTCACTCACTCAATGCGCCTTGCATTTAAGAGCTCTCTTCTTTTGGTACTGCAATTAAACACTCTTTCCTATCATCTTCTCCCTCCCACCTTCATAAACAAATTTCATACAATAAATAATATGTAAATTTTATCTAATTTTAAAAATAAATAAAATTTAAAATTTCATTTCTTAACTATCATCTTAATCTTCCATTTTACTGCTCTCTTTTCTTCTCTCCCATCGTATCATTGAAAAAATTGTCCAAGACAGACTTTTTTTACCCTCTCCTTTCACACTCGTGCACACCAAGGAACTACGTTATCCTATTCATTACACAAGTACCTTCAAATATTACTTATAAGACAGTTTCGCAGATATGAACTTTGGTCGAAGGTAATAATACAGTAGCTTACTATTTAAATATGAAAAGTATGGGATCTTTGGTCTGTTTTTTCTCAATCTAAAAGTCCAAAAAGTTACAAAAGTCATAATTTAGGTAAAGCGGAGAGATATAGATTTCTGCGGAAGATTCGGCGTAACAACAACTGAATTACTCCCACACTTCCCCATTTCATCCTACAAAAATGTACCTAAAATGAAAAAAAAAATCCCCTTTTGTCTTTTTTACTTTAATTATAGTCTTCGGCTATACGATATAATTTCGTGGTATTCTTTTGGGGTCAAGTATACGAATAATTGTGATGAAAGACTTGGCCATGTTTTAAATTTTATGTCGTAAGATAATCGCATTAATAGTATAAAATTTAATTATGCTTATGCATTAATAGGATGAAGATAAAATGATAAATTAGAAAATGGGGGCAAATAGAAAAAAAAAATTGAAAGGAGGTTCCAAAATTAGGAAACGGAAGCTGTCGGCGAAACCCCAGACTGTCCCCACTCCTATTTATATACAAAACCCTTTTCATTCTCATACCATCCTCACCCACTCACTCTTCTCCA


Gene Sequence:
>Vu_20648(-)
ATGCCTGCCCACGCGCCTCCAATCAACAAACACTCTCCGCCGCCGCCCAAAGAGGCCCATTTCAGAGGCGTCCGCAAGCGTCCCTGGGGCCGCTTCGCCGCCGAGATCCGCGATCCCTGGAAAAAGACCAGAAAGTGGCTCGGAACCTTCGACACCGCCGAGGAAGCCGCCAGGGCCTACGACACCGCAGCAAGAACGCTCCGAGGGCCCAAGGCCAAAACCAACTTCACCTACGTCGTTGCTCCTGCGATTTTCGCTGCCCCTGAATCTCAGGCCCCAGCCCATGACCCACTCGCTAGACCGGTCGAGTTCTTCGGCCTTCCCTTGTTCTTCACCACGGATGCAGATTCCGGGGCGCCGGTGAGGTCGGAGTACAAGGGCTACAAATTGGAGAACATTGCCGGATTTGTGGTTACCAAGGAAGAGAAGAAGAAGCCGTTTTTGTTCGACCTTAATCAGCCGGCGCCGCTATTCTGA