Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20680 LG5 25803711 25805564 PREDICTED: myb-related protein Myb4
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to water deprivation, response to cold, response to salt stress, response to cold, response to salt stress, response to water deprivation, response to water deprivation
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
C/T 25803721 missense_variant p.Ala4Val
C/G 25804075 stop_gained p.Ser53*
T/A 25804302 intron_variant
A/T 25804356 intron_variant
A/G 25804363 intron_variant
A/T 25804449 intron_variant
A/G 25804453 intron_variant
C/T 25804485 intron_variant
A/G 25804488 intron_variant
G/C 25804490 intron_variant
G/C 25804491 intron_variant
C/T 25804510 intron_variant
G/T 25804574 intron_variant
C/A 25804590 intron_variant
G/T 25804600 intron_variant
T/A 25804623 intron_variant
G/T 25804638 intron_variant
C/T 25804775 intron_variant
G/T 25805449 missense_variant p.Ala226Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20680.1
MGRAPCCEKMGLKRGPWTHEEDQILINYINIYGHSNWRALPKLAEEDAIISLHQMLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLPQNYRQSQEQQRSKKQPKLDGDASKINYQDVKLEQQQDPVNNVHVHASTKEDNSTEEMPLSPPQCSSDMSSLTNSDNNSSINNSNNNCDMSSHVNDIDTPENNLALDEDFWSEVLLSDDSSGETSGFPSIDYGRFEPMSSEEVGVLIDGSSSSMSDGMDFWCNVYARAEEFNQLLEL*


CDS Sequence:
>Vu_20680.1
ATGGGGAGAGCTCCATGCTGCGAGAAAATGGGGTTGAAGAGAGGGCCATGGACTCATGAAGAAGATCAAATTCTCATCAATTACATCAACATTTATGGCCATTCTAATTGGCGTGCTCTGCCCAAACTAGCTGAAGAGGATGCTATAATCAGTTTGCATCAAATGTTGGGAAACAGATGGTCGGCTATAGCTGCGAGATTACCTGGTAGAACAGACAACGAGATAAAAAACGTGTGGCACACCCACTTGAAGAAGAGGTTGCCACAAAATTACCGACAAAGCCAAGAGCAACAACGAAGCAAAAAACAACCAAAGTTGGATGGGGACGCTTCCAAAATCAATTACCAAGACGTCAAACTAGAACAACAACAAGACCCCGTGAATAACGTTCACGTTCATGCATCAACCAAAGAAGATAATAGCACAGAGGAAATGCCACTTTCTCCTCCCCAATGTTCTAGCGATATGTCTTCGCTCACCAATAGTGACAACAATAGCAGCATTAATAATAGTAATAATAATTGTGACATGTCCTCGCATGTTAATGATATTGACACACCGGAGAACAATCTTGCACTGGACGAGGATTTCTGGTCGGAAGTATTGTTATCTGACGATAGTTCCGGTGAGACAAGTGGATTTCCGAGCATTGATTATGGTCGATTTGAACCAATGTCTAGCGAAGAAGTAGGGGTGCTTATAGATGGTAGTTCGTCAAGTATGAGCGATGGCATGGACTTTTGGTGCAACGTTTACGCCAGAGCTGAGGAATTCAACCAGTTACTTGAATTATGA


Promoter Sequence:
>Vu_20680::LG5:25801711-25803711(+)
TCGCCTTTGAGTTTTGAAATATGTATTCGATGTTTTAAAACATGTTTAATTCGAGGCATCTTTTTAATTGTACTTCATGTGCTGCTGAATCGTAACGTATTGCTTAACCAATATAAATAATTTCTGGTTGACTTTGTTTAATTTGTCTTATTACCTTTAAAAAGTATACTTCATTTGTTTATCATGAATGTATTAATAATGCTTTTTTAATTAACGGATGATATTATTTATATATTTATTTTAAATATTGTATTTGTCGCTTTATGTTTTTTTATTTTTCGTTTTACTGTATGTAATATTAATATTAATTTATACCAGTCGTATCATTATTATTACTTAATTATGTCAACTTGGCTTCAAAGAAATCATCCTATTAAATTTTGGAATAATATAAAAGAAAAAACAAACTTGTCCAACGACATGTATTTTCCTTTCCGTTTTGTAACATATGCAAAATGTGAGATTTTTCTCTTTTAAATGGTTACATAAATGAATACATATTATATATCCATTTGGTCATATGCCTTTACATACTTATTAAATTAATTTTAGTTTAACTGTATCTTTTTCCTATATTTCACACAAATCAACAATTTTGGTCTCTAAATTTTTTTCTTGTAATGTTAGTCTTCTAATTTTTATTTTAAAGAATAAACTGAATTATTATCAAATTATATATGATAAGAAATTCTTAAAGCTAGTCACAGGTATTCTACGAGTTTCTCCCAGTCTCACTGTTGCATATTCAAAATATAAAAAAAAAAACTACGTATAATTATATATTAAGAATCAAAATTGCATAAAGAAATAAGAACCAACAATAATAATTATTAAAAAAGTAAGTAAATTTACGGGGGGAAAAATGAAGGGCCTAACTGCAGAGCTTATAATATAGAGATTAAAATGACATTTAAACCTTATTAATTTTAAAAACAAAGCTAGAATCATACTTATATATTTATTCCATTTTACAAAATTTACTTTAAGCAATTAATATTTTGTGTTCAAATTGAAAACCCTAACTCTTTGTAGTTTTCGTCTACCATATATCCCTCATTTTCCTAACTGTGTCATTCATTGCAAAATCATTTTCGAAGCTAGTTAGTCACCTAACATCTTTAACAACAGTATAAATAATGACTCCGAATATATATTTATATTTAAACAACACAGGATGAAAAAAAAAATCAATTTTTCTTAGTTTGGTGATCAAAAAGAAAATTGTCAACACCGCAATATATTTCAGTTCTAAGATGCAATTTCAATTCGAATTTGAATAGCCAACTGTGGTAAGATATTGCAGATATTAGAGCTTTTCCTACTCGTATTCTCTTCTAAACAAAATCATTTGAGCATTTGGTATATAGATAAATATTAAAGTAAAATGTGCGTGTGTAGCCGAAAAACTGTATGAACACACTATCAATATATATGATAGAGAAAAGCTAAAAGGTAATATAATAGAATGCATAAAATAATAGTGTATCTAAATTGCTGAGATACAGTGATGTTTTCAAACATGTAACTTTTTCTTTTCGTTCGTGTGAATAAGTTCTTTTCAGCCACTTACCACGTTGAAAACTGAACTATCTAAAGGACAGTCAGACAAAGTAGGAATACATGCTGAAATGATCAATGGATATAGAGAGAGACAGAAGATCAAAGTAAGTGCACTCTAGTTAATGTCATACTGTTGTACAACCAAATATATTAGGCAAAAGCCACGTTTTATTTGACTATACAATAATAGTCTGAAAGAAACCTCAAAAATTAATTAAAAAAATGATGAATTTATTATAATATCTTATAAACAATAATAAAGGAGTTTTGTACTGTTATGTACAACTCAATCAATTCCCCATTCGTGTTATTATGTGCATATTAAAGAGCAAATAGCTGGAGTGAGATTTATCTCTGCTTTAATTTGGTGTGTGGATATATAAGAAAAGAGAGTTCGCACTTGAAGCTTTGAGCAATCGTTTGAGTTTTGAAGCAAAGAA


Gene Sequence:
>Vu_20680(+)
ATGGGGAGAGCTCCATGCTGCGAGAAAATGGGGTTGAAGAGAGGGCCATGGACTCATGAAGAAGATCAAATTCTCATCAATTACATCAACATTTATGGCCATTCTAATTGGCGTGCTCTGCCCAAACTAGCTGGTATGTCTCAAATTAACCTAATTCTTGTTCAAATGCCTTAGCTAATAACTATTTGAAGAAGAATATAACATAGCTATACCATTAACCAAGTTTCTCTTTCTCTCTTTTTGATGAATAGGGCTGTTAAGGTGTGGAAAGAGCTGTAGACTTCGGTGGATAAATTATCTGAGACCAGACATCAAACGAGGCAACTTCACCCCAGAAGAAGAGGATGCTATAATCAGTTTGCATCAAATGTTGGGAAACAGGTAAACTACTGATATTTTTTCTACCTATCTGCCATTAAATTTCACATTATAATTTCTAATAAGCTATAGTTTAATCCATGTTAACTTCACCTTACATGGAAATAAGATTCTTTTTATCGAAAACCAATAACAAAATCTGTTGAAAAACCATGAATGACTCCACAACCGATTCCAAACAGTGAAGCAAAGATTCCCGAATATCTTCATTTTTTCTTTGTGTCTGGTCATTTTCTATTCTGTAACCTGAAACTGATGGATGGATATAGCAGATACATGTGATTTCATAAAAGTCTTGGAAGTATACAAACGGATATAAAATTCTTTCTCGCCAGCCTCGTTTTTTTTTATTCTTGTTTTATAAAGAAAGGAACAGTTTTTTTGGTCGCTTTTTTTCTCAAGGACCATAATATTTTAATAACTTTTTGACAATAATTATTTTATTGATTTTTATATTTGAAATGGACCACTGACAAAAATTAATTGTTATAAAAAAATTATCAAAAAAAAAGTTCTTACAAAAAACCTTTTTTTTTTTTTTTTTAAATAGATAATGGTTTGGGCCCATTTGCACTTTGATTTTTTTTCTTAGTTTTCAAGGCAAGCAAAATCATACCCTGTTGGATATGTCGGTCTGCCAAGATTCTCTCTTTTTCTGCAACCTTTTCACGTGCTTAATTTTTGTACAAAACAACACATTATTTAAACACACATCACATAACATTATTATTACTACTGTATATTGTGACTTTGGAGGAGTGAAGCCAGCTATACGAAACCAGCTATTTCCCTTTTTAATGAATATTTCCTCCAACATCGATTTTGTGTTCTAATCTTGTGATAACATCCGCGTGCAGATGGTCGGCTATAGCTGCGAGATTACCTGGTAGAACAGACAACGAGATAAAAAACGTGTGGCACACCCACTTGAAGAAGAGGTTGCCACAAAATTACCGACAAAGCCAAGAGCAACAACGAAGCAAAAAACAACCAAAGTTGGATGGGGACGCTTCCAAAATCAATTACCAAGACGTCAAACTAGAACAACAACAAGACCCCGTGAATAACGTTCACGTTCATGCATCAACCAAAGAAGATAATAGCACAGAGGAAATGCCACTTTCTCCTCCCCAATGTTCTAGCGATATGTCTTCGCTCACCAATAGTGACAACAATAGCAGCATTAATAATAGTAATAATAATTGTGACATGTCCTCGCATGTTAATGATATTGACACACCGGAGAACAATCTTGCACTGGACGAGGATTTCTGGTCGGAAGTATTGTTATCTGACGATAGTTCCGGTGAGACAAGTGGATTTCCGAGCATTGATTATGGTCGATTTGAACCAATGTCTAGCGAAGAAGTAGGGGTGCTTATAGATGGTAGTTCGTCAAGTATGAGCGATGGCATGGACTTTTGGTGCAACGTTTACGCCAGAGCTGAGGAATTCAACCAGTTACTTGAATTATGA