Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20688 LG5 25891602 25891778 protein CUP-SHAPED COTYLEDON 3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, floral organ senescence, regulation of transcription, DNA-templated, positive regulation of programmed cell death, regulation of transcription, DNA-templated, positive regulation of programmed cell death, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, floral organ senescence, regulation of transcription, DNA-templated, floral organ senescence, floral organ senescence
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA binding, sequence-specific DNA binding, DNA-binding transcription factor activity
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_20688.1
MGLRDIGASLPPGFRFYPSDEELVCHYLYKKIANEELLKGTLVEIDLHICEPWQLPGT*


CDS Sequence:
>Vu_20688.1
ATGGGTCTCAGAGACATTGGTGCTTCACTGCCTCCTGGCTTTCGCTTTTATCCCAGTGACGAGGAATTGGTCTGCCATTACCTCTACAAAAAGATCGCAAATGAGGAACTTCTCAAGGGTACCTTGGTGGAAATCGACCTCCATATATGTGAACCGTGGCAACTTCCAGGTACATAA


Promoter Sequence:
>Vu_20688::LG5:25891778-25893778(-)
TTGATTTCGTAAAAGCTTCGTCAAGGTCTTGTCTTGATCTATTACTCATATCTTTTCCTTTGATTATTTAGGAATTGTTTATTATGCATTCAATGGTTTGAAACACTATTATTTTAATATTTAAATTGTTTTAAATTTTTTTATATCACATATAAACTTTGGTTAAGAACCAAAGCCTAAATCCTTCATTTTTTTGTCTCAGCTTAATATATTTTGGTTATAGAGCCAAAATAAAACCCTAAAAATAATTGGTCTCAATTTTTTTTTATGTACTAGTGTTAATAAAGGGTGTCAAATACATCTTCATTAAGGATATTTTTTTGGTATATGCTCATTAAATATAAATTTCACCTTGCAAATATGAAATCCATTTGAGATATGTGTACAAAGCACACTAACGTTACAAGGCTTAATTATAATTAAGAATTGGGTCCTCCTTGACAAGGGTAGGGGACCCCAGCTAAAAGACAATTAATGAGGTTACACCACACACACTCGCATCATTCCAAACTATCATTCTGTGATCCAAAACAGAACAGATGGGACTTAAAACTTCATCATTGGCATTAATTTCTACATCCAGCTACATCAATTATTTCCTCCGTTTTATATATAGAGTTGTCCATTTTAAACTGCACCCAGAAATTTATCAAATGCTCACGTGTGCTCCCCTGTTCAATCTTCGGACTTCCATTAATTTAATGCAAAGCAATCTCATATCTGGATATTTCTAAATTAATAAACTACCTCCCAGCTCTCTCATTGCCACTACTGTGGAGCTTTTCATTTGTTTCCTAACCTACCATGGGGAACAAACACGAGTAAAATCAAAAAGTGCATCACAGAGAAGGACTTGGCACAGGCATAAAAGAGTGCATGAAATTGGAAAAAAAGACCAAAAACGTGATGTTAGGACCATCTACAAGAAATAACCTAGATTCATTGTATGTACCTTAAAAAACTCTACTATTTCATTTGTTAAGATGCCCATGCCTCATCTAAAAGCCAAAGTCATCAAAGTGTTGGACTAGTTCCAACCAGGTTGAGATTTTCCCAAAAACACCTCAAAACTTAAACTTAAAGTCTATCCAACTAGAAACAAACAAATGTTGAGATTAAACAACCTCGTTAAAGAAGGGAGAAAGTTATTGAAAAAGTTTTGGATAGATATAGATCATGAAAACGTTAGACGTAGCAAGGTACACCTTTTCACAGGTACAAAATCTTTAAAAAAACTGTATGCTAATAAGGATAATGTTAAGAATAAAGGTTAAGAAACAGATTTTGAGTCTAAATAAAAATAATAAATCTCTTTAAATTTGATTTGTTTTATAAAATTATTTTATAAAGTGAAGTTTGTATTTAGATATATATTTTTTAAATTAATTTTATTTATAATCGATTTTCATCATAAAAGTTAATAAATATGTAAAAAAGATATACAAAGTAAACCAGTAACCTGAGATAGGGTAAGAAAGTTAACAGGATTTTCTATACGAAACGCAAGTGTCGTCCAAAAGTTACTACTAGTTAGTTATTACTATAGAGTAATAGGTTTTCCTGGAATTAAGGAAAGATAAAGGAGACACAAAATTTTCAAGAATATCAATTAAAAAAAAATATGCTTTTTGGATGGTGTCTATTACTCGTATTATTGTTCTACCCTTATTTGTCAAGGTTTCTTGTAACTTTGGTTTTTCTTGAAACTTCCTACTATAACTAACCACTTACACAAGCATGCCCCTGCTATGGAATATGAATAAAGAAATTCTGATTAAACGGCAAAGCATGATATCTTTCTAACTATATATATATAGGCGACACCAACCTTTGTGCCTCTATACCTTAATATTTCAAATACTCAGAGGAAGTAATCTCTCCAATCTTCAATTATATACATTATCCACATTCCTAGCTTTATCCATATCCACTGAATACTCATTAGATTTCCCTCTCTCTTCCTCTACATAACTGTGTCACATCTTAGATCTCCTTCACAA


Gene Sequence:
>Vu_20688(-)
ATGGGTCTCAGAGACATTGGTGCTTCACTGCCTCCTGGCTTTCGCTTTTATCCCAGTGACGAGGAATTGGTCTGCCATTACCTCTACAAAAAGATCGCAAATGAGGAACTTCTCAAGGGTACCTTGGTGGAAATCGACCTCCATATATGTGAACCGTGGCAACTTCCAGGTACATAA