Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_20721 LG5 26209009 26213836 PREDICTED: protein PHOSPHATE STARVATION RESPONSE 1 isoform X2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, response to arsenite ion, cellular response to phosphate starvation, cellular response to high light intensity, cellular response to phosphate starvation, cellular response to phosphate starvation, regulation of transcription, DNA-templated, regulation of ion transmembrane transport, regulation of ion transmembrane transport, cellular response to phosphate starvation, cellular response to phosphate starvation, regulation of transcription, DNA-templated, cellular response to phosphate starvation, cellular response to high light intensity, circadian rhythm, cellular response to phosphate starvation, cellular response to high light intensity, sulfate ion homeostasis, regulation of transcription, DNA-templated, cellular response to phosphate starvation
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/G 26209052 missense_variant p.Glu468Ala
T/A 26209109 missense_variant p.Glu449Val
T/A 26209130 missense_variant p.Glu442Val
T/A 26209473 downstream_gene_variant
A/C 26209480 downstream_gene_variant
G/A 26209538 downstream_gene_variant
C/T 26209952 downstream_gene_variant
T/C 26210021 downstream_gene_variant
T/C 26210024 downstream_gene_variant
T/A 26210045 downstream_gene_variant
T/A 26210182 downstream_gene_variant
C/G 26210370 downstream_gene_variant
A/C 26210543 downstream_gene_variant
C/A 26210755 downstream_gene_variant
T/C 26210785 downstream_gene_variant
T/A 26210962 downstream_gene_variant
T/C 26211019 downstream_gene_variant
A/T 26211046 downstream_gene_variant
A/C 26211485 downstream_gene_variant
T/C 26211486 downstream_gene_variant
A/T 26211487 downstream_gene_variant
A/G 26211714 downstream_gene_variant
T/C 26211834 downstream_gene_variant
C/T 26211945 downstream_gene_variant
A/G 26212205 downstream_gene_variant
A/T 26212230 downstream_gene_variant
A/T,G 26212416 downstream_gene_variant
A/T 26212421 downstream_gene_variant
G/T 26212454 downstream_gene_variant
A/G 26212462 downstream_gene_variant
A/G 26212571 downstream_gene_variant
A/T 26212811 downstream_gene_variant
C/T 26212820 downstream_gene_variant
A/G 26213012 missense_variant p.Ser239Pro
G/T 26213027 missense_variant p.Gln234Lys
G/T 26213409 missense_variant p.Pro143His
G/A 26213736 missense_variant p.Ser34Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_20721.1
MEARSTFSIERSNAKQHNNMGMSEAFPSSLPVLSMPLEGTCPKLSDSQPAFMEKALKPKPFTHSNHLTTSGAVGHMFSSSPGYSTDLHHSSFSSHEKHPINTPFISQSLSNKASLPLSYSSNSEPLPSTTSTLYSNGNSVSWPTDSLSGFLDFPANTSIDNSQAESNACNIMANEEYSTKRSDWQEWANQLIGDDDPLTANWNDLLADNIQDLEPKASNSSSQLPIGHQSQSHQQLSVSSGENRVGVAPSSSANSVPSKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGAAEKKLSPIEEISSLDLKTGIEITEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGIETFKASSAGDSPSGVSSDVMKDSTAKTDSETVKVDLCESGPDQANGSTKVEESSSKVDEKQDPAECKASENPKQHASEDSSQAPKRQRTED*


CDS Sequence:
>Vu_20721.1
ATGGAAGCACGTTCTACTTTCTCTATTGAAAGATCAAATGCTAAGCAACACAATAACATGGGGATGTCTGAAGCATTTCCTTCATCGTTGCCTGTCCTTTCAATGCCTCTAGAAGGGACATGCCCCAAATTATCTGATTCTCAGCCAGCATTTATGGAAAAAGCGCTTAAACCAAAACCTTTTACTCATTCAAATCATTTAACTACCAGCGGAGCTGTTGGGCATATGTTTTCATCTTCTCCTGGATATTCAACTGATCTTCATCACTCATCCTTTTCATCTCATGAAAAGCACCCTATAAATACTCCTTTTATTTCACAGTCATTGAGTAACAAGGCTTCACTGCCATTATCTTATTCTTCAAATAGTGAACCATTACCTTCTACAACATCAACACTTTATTCCAATGGAAACAGTGTTTCCTGGCCTACAGATTCCCTATCTGGCTTTCTTGATTTCCCTGCCAATACCTCAATTGATAATAGTCAAGCAGAAAGCAATGCCTGCAATATTATGGCAAATGAAGAGTATTCTACTAAGCGAAGTGATTGGCAGGAGTGGGCTAACCAGTTAATCGGTGATGATGATCCCTTGACTGCTAATTGGAATGATCTTCTTGCTGACAACATTCAAGATCTTGAACCGAAGGCCTCAAATTCATCTTCACAGCTTCCCATAGGACACCAATCCCAAAGCCATCAACAACTTAGTGTTTCATCTGGAGAAAATCGTGTTGGTGTTGCCCCATCTTCGTCAGCAAATTCAGTACCTTCCAAGCCACGAATGCGCTGGACACCTGAACTTCATGAGGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCTACACCTAAAGGTGTGCTGAAGCTTATGAAAGTTGAAGGACTAACTATATACCATGTTAAAAGCCACTTACAGAAATACAGGACAGCTAGATATAGGCCTGAGTCATCTGAAGGAGCTGCCGAGAAAAAACTAAGTCCAATTGAAGAGATATCATCTCTAGATTTGAAAACTGGTATTGAGATCACTGAAGCTCTGCGACTGCAGATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGCTGCGAATAGAAGAACAAGGAAGGTACCTTCAAATGATGTTTGAGAAACAGTGCAAATCTGGCATTGAAACATTTAAGGCATCATCTGCCGGTGATAGTCCATCTGGAGTTTCTTCTGATGTCATGAAAGATTCTACAGCCAAAACTGATTCCGAAACTGTCAAAGTGGATCTTTGCGAGTCAGGACCTGATCAAGCAAATGGCAGTACCAAAGTTGAGGAAAGCTCATCGAAAGTGGATGAGAAGCAGGATCCTGCTGAATGTAAAGCATCTGAGAATCCTAAGCAACATGCTAGTGAAGATAGTTCTCAAGCCCCAAAGCGTCAAAGGACTGAGGATTAA


Promoter Sequence:
>Vu_20721::LG5:26213836-26215836(-)
ACATTATTACATTTTGGAATGAACGGTATATGGTACTACCACCCAGTAATTCAATAACCCAGAGTGATCTTCACGCGCCACGCTGGCGCGTAGGATTGGTTCCGGCTATTCCTCCAAAAGGAGCCAAAGCCATAGAGCATTCGTTCGTCACCTCTCGCCAGCACCCAACCTTCTCCTTGCCGGTGACGGAATTTAAAGCACCTGCCCTAGTTTGCATCAAAGTTTCCAGCTTCACGTGAACCCTTTACGGGTAAGAGTTTGACGCAGCCGATTTCGTGAATTTGCCTGCCCCTTCTCCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTTCTGTATTTTCTGTTATTTGCGAAAATACCTTTTTCTTAAATTCCCCCCTTTTTCGTTGATTGCTGGACCCAATTCGCATTGGTTGGCTTCTATTTCCTTTTCTTTGTATGCTGGTTCTACCGGTTAACGTTGGTAGGAAGTCTGTTCCTAATTTACCCAATTTTTTCTTTTATATTAATTCTATAGGTTCTGAGTTTGCATGCGTTTTGCTATGCATATCTTGTGAAGATTTGTTTGTGGAGTGTGAATTGTGTCCTATGGGGTTTTATTCTTTTTGCTATGGATATGCTTGATCATCAGTTTATACAATTTTTTTAATTACTTTTCATAGATGGGCCTGACAGTGGTGGCTTGCATATTGGGTTGATTTATCTGTGTTGTTTTTTATGCACCTTTAACACTTTGAAGTTTGAACTGTGTGAAAACAGTTGGGAAGAAACTGAAAATTGGTAGAGTCTGGGATACGGACAGAACTTTTTGTTGCTTATCTTTTGTCTACTATGAATAATGCATAATGCAACAGTGAAACTTGATGTTTGCAGTTTATGAGGGTGAGAAAATGCATTTTCTCGTTATCCGTGTGCAACTTTTGTATGTCTGCGTAAACTCGTCATTCTTGATGTCTGCGTAAACTAAACTTTTACTCGATGGTGAAGTTGATAGTTAACCTAGATGTTTTCACTTATACATACATTTCAGTTGGATGTGTAATTTGCAGGCTTTGTTTCCTATTGCATGATGACAGTAACGCATTTTTTTCTGTCAAGGGGAACTGAGAAAGTTTTTATTTTTCTCTCTTACTTCATCTTCTATTCTTTAGGACAGTGTATAATAAAATAACACTTAAAGGGTCGTCCGGCATGCTCCTAAAATTTCCACTCAACCCCTTTCTTTTTCATTTCATACTGTGATACTCAGTGTCTGATTTTTGTTGCACCATCAGTTTATTTTGACAAATAGAAGTGTACCAAAACATATTTTGTAGTTATAATTTACACAGTTGTATCTCCCATAGAAGTTTACCTCCTTTGCTTTATATATTATGCATTGCCAATCATTGTTGTAAGAAAGACGTTCCTCCCTATTTTTATATCTGAGCAATTCACAAATTACCCTTCAAAATATCAAAGCAACGGAGTTGCGAAGGATATAGGTGTTAATATCTAAACAAGAAGAGTGTAAATTTAATTAACAGTAACTTCCAGAAAGCTAGTTTGTGTATTTCAAGTACATTGAAATCCTGGGTATTGGATATTTACCTTTTACTCAATTTCAAGGTTTGTGATTAACAGTTATGATGGTTTAAGGTTTTTAAATTGTTCATATGTTCATGTTTAGATTTGTGTTTATGATTACACAATATTTTTATTTGTGTTACATTCATTACGTTGTTATATAATCTAAAGAAACAATTTTGTCACAAGTGAGTTGCTTTAATTTTGGTTAACTGATGCTAAGGTATCTTTCTTTCTTTCTTTCATGTTGTGAAGATTGATGACAACTTGTCTGGTTTGGGGATCAAGAACAAAAAACAACCTTCGTAGAATTTTACTGGTAAGCATTACCATCCAAGGGAAAATGTAAAGTCTGAAAGCTTTTGCCCAGTTTGACTAGATAGCTGACACTTTTATCCTTTCAATTAATAATTTAGGAAAATT


Gene Sequence:
>Vu_20721(-)
ATGGAAGCACGTTCTACTTTCTCTATTGAAAGATCAAATGCTAAGCAACACAATAACATGGGGATGTCTGAAGCATTTCCTTCATCGTTGCCTGTCCTTTCAATGCCTCTAGAAGGGACATGCCCCAAATTATCTGATTCTCAGCCAGCATTTATGGAAAAAGCGCTTAAACCAAAACCTTTTACTCATTCAAATCATTTAACTACCAGCGGAGCTGTTGGGCATATGTTTTCATCTTCTCCTGGATATTCAACTGATCTTCATCACTCATCCTTTTCATCTCATGAAAAGCACCCTATAAATACTCCTTTTATTTCACAGTCATTGAGTAACAAGGCTTCACTGCCATTATCTTATTCTTCAAATAGTGAACCATTACCTTCTACAACATCAACACTTTATTCCAATGGAAACAGTGTTTCCTGGCCTACAGATTCCCTATCTGGCTTTCTTGATTTCCCTGCCAATACCTCAATTGATAATAGTCAAGCAGAAAGCAATGCCTGCAATATTATGGCAAATGAAGAGTATTCTACTAAGCGAAGTGATTGGCAGGAGTGGGCTAACCAGTTAATCGGTGATGATGATCCCTTGACTGCTAATTGGAATGATCTTCTTGCTGACAACATTCAAGATCTTGAACCGAAGGTTAAATTTTTTAATTTATCAAACCAGCATGAGTTGCAGATTATAATTATTAGCTATTTATTCAAGGAATGTGTTAGAAACTCATTTTGTTTCATAAGGTGTTGTACCAGGCCTCAAATTCATCTTCACAGCTTCCCATAGGACACCAATCCCAAAGCCATCAACAACTTAGTGTTTCATCTGGAGAAAATCGTGTTGGTGTTGCCCCATCTTCGTCAGCAAATTCAGTACCTTCCAAGCCACGAATGCGCTGGACACCTGAACTTCATGAGGCATTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGTATGTTGATCTTCTTTCTCTCTTTTCAGAGAAAGGCTTTAGTTCTTAAACTTCTGGCTCATTTTTTCCCATTTTCTTTTTACAGGAGCTACACCTAAAGGTGTGCTGAAGCTTATGAAAGTTGAAGGACTAACTATATACCATGTTAAAAGCCACTTACAGGTGTATACCATTTGCTTTGTCCTCCTAGTTTGTTTCCTTGCATGTGTTTGGTAAAGCATATTGCTTGATGAAATGCAGAAATACAGGACAGCTAGATATAGGCCTGAGTCATCTGAAGGTACACAAGATATTCTTTGGATATATACCATCTGTATACTGTATAGATAATGTTTTGCACGTAAGGATGAGGAGATCATTGGCTATTGAATAACACTTTGATGTGTGAAACTTCTGCAAAAGCTTTTACCGAGATAATGATTCTCATAGAATTTCATATTGATAGGAAGCTAATTTGCTTTCTATAAAAAATAATTGGAATTTTACACAAAATATGCTTTTCAAACAAAATAACACCTTCTATAAGAAGTTATTGAATGGTGCAAGTGAAGTCTTACATTTTTTGCCAGTGGATCTTAATCCCTTTGTGAGTAATATTTTTGTTACATGTTTTTGGCTTCATCTTTTGTTTATGGTATATGACCTTTTTTTTTTCTTGTCTTTTGCCTCGTTATTGGCTACTTTATTATGAAACCATTTAACATGCAAGTTTCCATGGATTTTTTTCCTATATTTGACTTGACTTAGTTGTGAAAATGCTAAATGTAACATGTTTTAGAAGTGAACTCATATGGCCTGTATTCAGTAATAGGTTACAGCTTTCATATATGTGGACTCACATTCAAGTATCTCTTGGTATGCACCAACACATGTGTAAACACAATTGTTTATTTTTAATTATGTATTTAGTCCTTCAAATTTGGGGGAAACCGGTTATGGTCCCTAATTTAAAAAAAAAAATCAGTTAAGTTCCTCAAATATTAAAAATGCAGTTTTGGTCTCTTAAATATACTCTTTAAGGAGTAAAAATGGTTTTGAAAAAATCGTTTTGTCCCTCAAATTTAGTACTTGGGGACTAAAAGCTTATTCTTTTAAAATTGAGAGACTTTTTTTATTTTTTTTTTAAATTAGGGGGGGGGGGGGGGGGGGGGGGGCAAAATATTTTTCGCATCAAACTTTTGTGATTAAAATATAATCAAGCCTGTTTTCTGAAAACCAAAGAGAATATAAGAGTTTTTGAGCTTTCAAATTACTCTAAGCAACCTAATATTCTCTTATTTTAATTTTAGGCTGAGATTTTATATATTGGAAAGTTTATGAGACCTATCTCTATTTGAAGTCTGTTATTTGCCTGTTGCCATGCATTTGATGTCTTGAAGTAGCGTGTTGTATATCTCTTGAAATCTAGAGCAGTGAACCTTCTCTTTGTGGTCCTAAAATGCACAATTTGTTGACTACTATTGGCAGGAGCTGCCGAGAAAAAACTAAGTCCAATTGAAGAGATATCATCTCTAGATTTGAAAACGTAAGTAAACTATGTATTTCCATTTAAAATTCTCTTTTGTAGTTTTGTATTTCAATGAAAATTGATACATTAAACTGTTCAGCAACACTTTGTTCTATGATGAGACTTTGCTAATATATATTTTCAGCATATGTTAAATATGTTGTATTCTTCTCTTCAAATTTTAACGCAAAGTCTAAATTTAAGAAAACATGGCTGTTGGAACTTAAAATGTGTTTGCCGTAGGTTTTCCATTTTTCATCGGTGTTAGTTATTTGTTCTGTTTGGCTGGAAAATTTTAGGATCCTGGAGACTGACACTAACACTTACAACACTAGTATTCAACTTGCATGAGATTTCATCCCTGTAAGCTTATTTCTTCTGTTGGCAGTAATTATCCTAATCTTATCACTTAACTGGAGAAGATAACAGGTGGATAAACAAAAAATTAGGGAAAGGTTAAAGAATGAATATACATGGAAGTAATAAAAAAGAGGAGGATTTATAGATAGTGACAGTCTGCATCAATGTTCTTTTTAGTGGGTTATGTTGGAATCATGAAAGAGCTTTTTGTTGACCCATCTAGGACAAGAGTTACGAGAGTATTAATATTTAATGGCACTATGTAGAGTTTTTGCTCATATTTGACGCATGCACAGACATTAATACTAATTGTTACGATGATTTTATCACTGAATTGTTGACAGTGGTATTGAGATCACTGAAGCTCTGCGACTGCAGATGGAGGTTCAGAAGCGGTTGCATGAACAGCTTGAGGTATAAACTCTGTTAAAATTCTGGAAATTTTCTTCTAATGTGATCATTGAATTGTTAAAAATCTAGAAATGTGATTCCAAGGCTAGTTTTCAAGGTGTACTTCTGTCACAGCATGACTATCAAAATTCATCATTCATAGCTTCATGGAAATAGTGAGAATAAGCTTTCAGAACTTGCTAGCCTTATGAACTTCAACCGGTGTTTGTGAGCTTGGTGAAAGGAATCGAAGAATGTAACTTGCCAAGGAGTTAATATGGTTTACTATTCCTCTCATGTTCGGTGCCTTTTTACTCTTATTTTTTGTTTGAGTACAAAGCTGTCTCGATATATAGTCAATAGATTAGTTTCACTTCATTGTAGATAATTGTAGTAGAAAACAGGAGGATCCTGAATCATCCAAAAGCTACTAAGCAATCAACAACAGACAGAAGCTGTTCAAAAGACCAACCCTACCCCTCTGCAAGTACTATCTACTATCACACTTAAAAAAAACCTTAAGGGAAACCTGCCAAGAGGCTAGGAAAGTGTTTCCCATAAAGGTTGTGGAGGAAGATAAATATTTCTAAAATTTATGAAATTAAACTCTTAACAGAATAAGCTAGTTCTTTTGAGAAGAGGATACTTTCCTACTCCCAAAACCTTCGTAACCTGCAGATCAGGCTGACTTCCCGTAATTTCTGAACTTCCCAGTTGGCAAGCATCAGCTAGCTGCTAATGAAGGGAGAATCTAACACTTAAATAACTTATTAAGCTTCTCATACTATTCAATGTTGAACTTAGACACCCCATACCTAAGTCCTTATCAAAGCATTACCCCGTGAAAGCTGACGTTTTGGTGACTTTCATTATGTGAAACTTTACTGGGTAATACTTGATTAAACTTTTTCTCACAAAACTGGAAGAGGTGATTTTAATTCTCTTTATAAACAAAGCATGTTCATTGAATTGACAAGTCTTGTAAACTTTCTTTTGAACTTTGTGTTTTTTCTTTATCTTTCTACCCTTTTTATTTTGAGAGGCATAAAAGGATATGATTACTATATTTAACCACATAATCCCTGGCTACAATGGTGAGAACTTTTGGTTTTTTCTTGGAAGCATTGAAGTAATTTCTATTATATTATTTGGCTCATAGGTGCCTACTACAATTTTGGGGTATGGGACTTTTGTTCGAATATCTTTTTTCCAATGGTGTGATCTTGATACATTTCTCTTATTTTTTGTTAGATTCAAAGAAATCTACAGCTGCGAATAGAAGAACAAGGAAGGTACCTTCAAATGATGTTTGAGAAACAGTGCAAATCTGGCATTGAAACATTTAAGGCATCATCTGCCGGTGATAGTCCATCTGGAGTTTCTTCTGATGTCATGAAAGATTCTACAGCCAAAACTGATTCCGAAACTGTCAAAGTGGATCTTTGCGAGTCAGGACCTGATCAAGCAAATGGCAGTACCAAAGTTGAGGAAAGCTCATCGAAAGTGGATGAGAAGCAGGATCCTGCTGAATGTAAAGCATCTGAGAATCCTAAGCAACATGCTAGTGAAGATAGTTCTCAAGCCCCAAAGCGTCAAAGGACTGAGGATTAA