Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_22588 LG5 56902425 56906550 PREDICTED: probable inactive receptor-like protein kinase At3g56050
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   hormone-mediated signaling pathway, hormone-mediated signaling pathway, protein phosphorylation, salicylic acid mediated signaling pathway, salicylic acid mediated signaling pathway, protein phosphorylation, immune system process, response to water deprivation, regulation of signal transduction, protein phosphorylation, cellular response to oxygen-containing compound, defense response to fungus, response to water deprivation, defense response to fungus, defense response to bacterium, salicylic acid mediated signaling pathway, defense response to bacterium, regulation of defense response, regulation of signal transduction, cellular response to oxygen-containing compound, response to abscisic acid, defense response to bacterium, defense response to fungus, hormone-mediated signaling pathway, response to chitin, hormone-mediated signaling pathway, response to water deprivation, response to abscisic acid, regulation of signal transduction, response to oxidative stress
Cellular Component   located in   chloroplast, chloroplast
Molecular Function   enables   ATP binding, ATP binding, protein kinase activity, protein kinase activity, protein kinase activity
SNP Position Effect Amino acid change
A/G 56902427 splice_region_variant
C/T 56902500 3_prime_UTR_variant
T/G 56902569 3_prime_UTR_variant
C/A 56902591 3_prime_UTR_variant
C/A 56902858 missense_variant p.Trp503Cys
C/T 56903266 synonymous_variant p.Arg367Arg
C/A 56903295 downstream_gene_variant
G/T 56903415 downstream_gene_variant
G/A 56903440 downstream_gene_variant
G/A 56903485 downstream_gene_variant
A/T 56903492 downstream_gene_variant
T/A 56903585 missense_variant p.Arg344Trp
T/G 56903586 synonymous_variant p.Thr343Thr
G/T 56903587 missense_variant p.Thr343Lys
T/A 56903706 downstream_gene_variant
T/A 56903781 missense_variant p.Asn305Tyr
C/A 56903842 missense_variant p.Lys284Asn
G/A 56903878 synonymous_variant p.Asn272Asn
T/G 56904041 downstream_gene_variant
G/A 56904064 downstream_gene_variant
G/A 56904188 missense_variant p.Ser216Phe
T/A 56904213 missense_variant p.Ile208Leu
T/G 56904286 missense_variant p.Gln183His
G/T 56904413 missense_variant p.Pro141His
A/G 56904427 synonymous_variant p.Ser136Ser
G/C 56904556 synonymous_variant p.Leu93Leu
G/C 56904833 downstream_gene_variant
T/C 56905020 downstream_gene_variant
A/T 56905029 downstream_gene_variant
A/T 56905264 downstream_gene_variant
G/T 56905284 downstream_gene_variant
A/T 56905450 missense_variant&splice_region_variant p.Leu78Met
A/C 56905473 missense_variant p.Phe70Cys
T/A 56905536 missense_variant p.Glu49Val
C/T 56905596 downstream_gene_variant
T/C 56905983 downstream_gene_variant
A/G 56906326 downstream_gene_variant
A/T,* 56906347 downstream_gene_variant
T/A 56906394 downstream_gene_variant
A/T 56906396 downstream_gene_variant
C/A 56906534 missense_variant p.Arg6Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_22588.1
MEERWRFITWLKLLRVLVAVVSLLFTFTMEPVRCSTVSSEGLALQKMKEKVERDPLGSLWSWNREVVDHFSHGKVVSLHIGEHGDTPSIRKLLQAANGVDDEKKTLSPSPSPFPSTLSPLSEPFSPSQSPSDSPTSPELSPSPSPSLSTFFFSLSPSPSPVPAPTPHTSPPPNPPMVVSTPPQSNWVSMPSPASSSNSSTTNQHAVIIWSIVGGFSFILVSVVVFLCFRSNKVVTVKPWATGLSGQLQKAFLTGVPSLKKTELEVACEYFSNIIGSLPDGTVYKGTLSSGVEIAVVSSAVTSSHNWSKNLETQFRKKIAMLSRVNHKNFVNLIGYCEENKPFTRMMVFEYAPNGTLFEHLHIREAERLDWGMRIRIAMGIAYCLEHMHQLTPPIAYKSILSSSVYLTEDYAAKLSDFSFWTDIVSTKKGSEAAQLLETAPEYIKANVYSFGVLLFELITGRIPFAVENGLFEDWAAEYIKGRPLRDVVDSNLNSLQENEIDKWEEVINSCVDPDPEKRPTMREVTSKLKEITTIGPDGATPKASPLWWAEIEIMSTDLSSDVNP*


CDS Sequence:
>Vu_22588.1
ATGGAAGAACGGTGGAGATTCATCACTTGGTTGAAGCTACTACGCGTGCTTGTGGCGGTGGTGTCTCTGCTATTCACCTTCACCATGGAACCTGTTCGGTGTTCCACTGTCAGCTCAGAAGGGTTGGCACTGCAAAAGATGAAGGAGAAAGTGGAGAGAGATCCATTGGGAAGTTTATGGAGTTGGAATAGAGAAGTGGTTGATCACTTCTCCCATGGCAAAGTTGTATCCTTGCACATTGGCGAACATGGGGATACACCATCCATAAGGAAACTTCTCCAAGCAGCAAATGGTGTTGATGATGAGAAAAAAACTCTTTCACCATCACCATCACCTTTTCCCTCCACACTATCACCACTTTCAGAGCCTTTCTCACCATCACAGAGCCCCTCAGATTCTCCAACATCTCCAGAATTATCCCCCTCACCATCTCCATCTCTCTCCACTTTCTTTTTCTCTCTTTCACCCTCACCTTCACCTGTGCCAGCACCAACTCCACACACATCACCTCCACCAAATCCACCTATGGTTGTGTCCACACCACCACAATCCAATTGGGTTTCAATGCCTTCTCCTGCTTCATCTTCAAACAGTTCAACCACAAACCAACATGCTGTGATTATATGGTCCATAGTTGGGGGCTTCTCCTTCATTTTGGTGTCAGTCGTTGTTTTTCTTTGCTTCAGAAGTAACAAGGTTGTCACTGTAAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAGAAAGCCTTTTTAACGGGTGTTCCTAGTCTGAAAAAAACAGAACTTGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCACTGCCTGATGGGACTGTTTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGTATCCTCTGCAGTGACTTCATCCCATAACTGGTCCAAAAATCTGGAAACTCAATTCCGAAAGAAGATAGCGATGTTGTCAAGAGTTAACCACAAAAATTTTGTGAATCTAATTGGATATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAACGGAACTCTATTTGAGCATCTACACATTCGAGAAGCAGAAAGGCTGGACTGGGGAATGAGAATAAGGATAGCTATGGGAATAGCTTATTGTCTGGAGCACATGCATCAGCTGACACCACCCATTGCCTATAAAAGCATACTATCTTCCTCTGTATATCTGACTGAAGATTATGCTGCTAAATTATCAGACTTTAGTTTCTGGACTGACATAGTCTCTACAAAAAAGGGTTCTGAAGCTGCACAGCTCTTAGAAACAGCTCCAGAATATATCAAGGCCAATGTTTACAGCTTTGGAGTTCTATTGTTTGAATTGATTACAGGAAGAATTCCCTTTGCAGTGGAGAATGGCTTATTTGAAGATTGGGCAGCAGAATATATAAAGGGACGACCCTTGAGAGACGTGGTGGATTCAAACCTGAACTCTTTGCAAGAAAATGAAATCGATAAATGGGAAGAAGTGATTAACAGCTGTGTAGATCCTGATCCAGAAAAAAGACCAACTATGAGGGAGGTTACTTCTAAGTTGAAGGAAATCACCACCATAGGACCTGATGGAGCAACTCCAAAAGCATCTCCTCTTTGGTGGGCTGAAATAGAAATTATGTCCACTGACTTAAGTTCAGACGTGAATCCATAA


Promoter Sequence:
>Vu_22588::LG5:56906550-56908550(-)
GAATAATTAATGTTGGTTAGTTTATACTTGCAAGATTACGTGAACTAGTAATATTGCAAAACTTTATAAAGTTGAAAGGTTATGTCTCTAGCATATCTTTTAGGTAGATTTACAAAACATATGAAAGAATGATACTATTCAAATATCTCCCACTCACATTTCAAAAATTAGATAACAAGTTAACCATCACTCTAAAAGTTAGGCTTAACATCTATGGCAGAATAATTCTGTATATGCTTCTATACAAATTTTCAAAATCATCCACGTATGAGTGACGTATAAGAAGTCAATTTTCGTACGTAGAATTTTTCGTATATGTGCATGATTAACTATAATTATTAGAAAACTGGGACTTGGTGTAAGGGACAAAGGCAAAGGAGAAAAAACGCGTGGGATGAAAATTTTAGCAAAAGTCAAATGCTAATATATAATATATAGACTTTTTTTTATCTTAAGCTTAATAATGATTGTGTAGCTTTTAAAAACTTCAAAACTAGCTGATAAACATGAATATTTTTATTAGTTTGAATCTGTAAATCTATATTTGTTTTGTGCTGTTTTTTATAGAGTTAGTTTGACATTAAATAAGTTTGGTTTTACACTAATAAGTTAGCATTTATAAGTTTAATTGTCCATTAGAAATGAAAGTGAAATGATTGTATAAAAAGATAAAAGAAAATGTTTTTTTCTTATAAAAAATAATAACTTATGTTAACCATGATATTACATAAACACAAGACATTACAAATTAATTAATAAACTAATAATAGTAATTTTAAATTTAAAATATTTAACATTACGATTAAAAGATGAATGATTAGTCAACAACCATAATGTAAAATCACTTTTTCCCATTACGTTGACTCAAACAATAATGTGAAAAAATTTCTTAACATTTTTTATTTTTATCTTTTTGTGCATTTTACGTATCATACATTACTTATCATATTTATCACTTTTCTTTCTCTTCTTAGGGTGTTTATGTTGTTAAAAATTCTATCTGTCCACCTCTCTCTATATATTAATCCACAGTTTTTTTTTCTATATGTTTTAAATAGACGTCATTATATTTTAAAATATCTACACTCTTTTGTCTATTTTTAGTTTTGTTTTCTTTTTTATTTTTATTTCAATCAATTAAACTTATTTTCATAATTATTTAAATAAGTATATTAAGTTTGGAGTCGAATTAATCGTAATAAACATAACAAACAAACATGCAAAATTAAAGACTAAAATTTTTAAAATAGAAAATCAGGTGTTTTTATTTAAAATGAAATTTAAATATTTATTTCTATTTCATTTGTGATTTTTAAAATTTAAAATCACATTAATTATTTTTTACTAATTATATATTTAATTTTTTAAAAATTTTAAACCATTTACGCATGTATCTATTGTGTGGAGAGAAAAAAGAAAGAAAGTGATAACATAGTGAATTATACATAACTATTTTATTAGAATAAAAGAATTATTGTATTTTTTTTATTCTTAGAAATAAATGACTTAAAAACCAAATAAAAAACGAATTACATTATAAAGTGAATTTACCAATTAATTTGTTTTAAATATTTACTACATTAAACGTCACATTAATGCATTTATAAAAATAAATAAATAAACGTAGGAGAACACGTGCGTTGGTGTAGGAGGTGATGGTAAAGGTTGAGAACACTTGTATAAATAGAATAGATGCGTTTACGACTTCTCCAACTCAATGCACCAAACGGTGAACAAATCCACGGTGCCGTCTTATTCTACTTGTTCACCGCAAAAGCTAAACGCTGATTCGTAAACATAAGAAGCCGTTTTATCGGACTCTTTCTGTTTTCCCTCCAAACACTCCCCCTGCTTCCTCCATTCCATTTTCATCATCTCGTTAACATTCTTGCATCGGTGACGCTGTGTTTCATCAATCATTTCCTTCTCCATTCTCTCTCTCTATAGTTTCAGAGGAACAAAGTGAACTCAGAAGATCATATACCAATTGATTGTTTCAG


Gene Sequence:
>Vu_22588(-)
ATGGAAGAACGGTGGAGATTCATCACTTGGTTGAAGCTACTACGCGTGCTTGTGGCGGTGGTGTCTCTGCTATTCACCTTCACCATGGAACCTGTTCGGTGTTCCACTGTCAGCTCAGAAGGTGACTCCAAATCTGAATGCACTATCGCTCTAATCATTTCTAATGTTGTTTTTTAAGGTTGTTGCATGTTTTTGTTTTTTTTTTCTTTATAATTTTGTTGTTTTCTAGATTCTGAAATGGGTTTTGGATTATACGTGTTTTTAGGTTAAATACTTTTGCCCTTTCCATTTTCTCTTTTTCAAGTTTGTTCTTTTATATTTAGATGGAGAAATCATTAGAAGGTCCTATCTATAAGCTCTAAATATTTTCAAATAGATTCTGAACAGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGTCATAACTATGTAAGGATTTATCTTGTAGTGGTTTTTAGGATCAAAATATATTTTTTCCTCATTTTTTTTCACATTAGAACGTTACTTTTAGGTGATATGACATATGACTGACTTGATTTAACAGAAATATTTCAAATAAATAAATTGAAGTTTCTTTTTGGAAATATGAGATTAAATTGAAAACATGAAAAACCGAAATTGTTGTTAGCCTTAGCCTATTTTAAGTTAAAAGAAATTATTTTTGGTGACTGACATGATTAAGATTAGGATTGAAGATTGGTATATAAATTAAGAAAAATAGTTCGTGCAGAAGTTTTTTACACGGATAATCAATTAAAAAAATACTTTTTATAATAACTGTTTTAATAAGAGTTAGACTTGGTTTTATATTGCTTGATATTAAACATATTAGATTTTTTATTTTTTATGGATTAGTTTTAAAAGCTAGAAAATTCAAATGTTCTACTTTTGAAGAAATTATATGGAAAAACACATTGATATAGCTGAACAAGTGTGCAGGGTTGGCACTGCAAAAGATGAAGGAGAAAGTGGAGAGAGATCCATTGGGAAGTTTATGGAGTTGGAATAGAGAAGTGGTTGATCACTTCTCCCATGGCAAAGTTGTATCCTTGTATGCAAACTCTTACCTTTTCACAATTTCATTTTTTTTCTTCATTTTTATATTATTTTGTAAGAACATGCATGCTATAGTAATTTAATCCTATGTTTGATATGTTCATGGAATATTTTCAAAAGGTGATAAAATAGAATATGAAAAAAAAAATCTAATTTTTTCGAATTTTAAATTTTAAACTTTTAAGATCTTCTAAAAAAATTTTAAATTTTATTGTTATTCTAAAAAAATCAATTATTCTCTTACAATTCTTCATTTAATCAGAAAGATAAAAATAATATTCTCCACTGAAATATATCTTTGATGATTTATATAGTAAAAAATGGGTATTTAATTTCTACTGTATCAAAACTTAATAAAAATAAAATAATACTTTACACTCTTAACAAAAAAATTTATCTACTCGAAAACTCTTTTAATAATATAATTATAAATATTAAAATTTTAAGACAATAAATAAATAAATAAAATTAAAACATTATTATTTTAAATTGTTAGGTGGGTGTATTTTATCTAATAAATGTGAAAATATCATCATTCTTCATAAAAATTAGTAGCAGTTGCAATATCTTAAGTGGCTATAGAAATATACATGTTTATTTCCAGTACCTGCGTGAAGAACTTGAAAGATCTGTGTCTCCACGGAACAAGACCAGTCCTATGTTAAACTTTGCTTTTGCTTTACATAGCTTCTATATACAGCATAGATTTTATATATGATTGTTTTCTTTTCTTGCAAGTCTAATATAGTGATGCTTGGGTGTCATCATCATCAACATCATCATCATCAACTGTTGGGTACTTGATGCATCAGATTATGTTTAAAATTGCCTGCTTGTGACAGGCACATTGGCGAACATGGGGATACACCATCCATAAGGAAACTTCTCCAAGCAGCAAATGGTGTTGATGATGAGAAAAAAACTCTTTCACCATCACCATCACCTTTTCCCTCCACACTATCACCACTTTCAGAGCCTTTCTCACCATCACAGAGCCCCTCAGATTCTCCAACATCTCCAGAATTATCCCCCTCACCATCTCCATCTCTCTCCACTTTCTTTTTCTCTCTTTCACCCTCACCTTCACCTGTGCCAGCACCAACTCCACACACATCACCTCCACCAAATCCACCTATGGTTGTGTCCACACCACCACAATCCAATTGGGTTTCAATGCCTTCTCCTGCTTCATCTTCAAACAGTTCAACCACAAACCAACATGCTGTGATTATATGGTCCATAGTTGGGGGCTTCTCCTTCATTTTGGTGTCAGTCGTTGTTTTTCTTTGCTTCAGAAGTAACAAGGTTGTCACTGTAAAACCTTGGGCCACAGGGTTGAGTGGCCAGCTTCAGAAAGCCTTTTTAACGGGTAAACGGTGCTCATATTTACTTTACTTTCATCATTGACTAGCTCAGCTGAAGATTTCAAACTGAAAAATGCATGTTAAGTACTAACAATAAAGTTTATGTTCTTTGAAATGGCATACTCATTGAGCATGTATTGATTCAGGTGTTCCTAGTCTGAAAAAAACAGAACTTGAAGTAGCTTGTGAGTATTTCAGCAACATTATTGGTTCACTGCCTGATGGGACTGTTTATAAGGGGACTCTCTCCAGTGGAGTTGAGATAGCTGTAGTATCCTCTGCAGTGACTTCATCCCATAACTGGTCCAAAAATCTGGAAACTCAATTCCGAAAGAAGGTACGCAGGCATCAAAGGTAGAAAATGTGCTACACTAGACTGGTTTTAGTACTGAACCTCTTCCTTTTCATGATTCCAGATAGCGATGTTGTCAAGAGTTAACCACAAAAATTTTGTGAATCTAATTGGATATTGTGAAGAGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAACGGAACTCTATTTGAGCATCTACACAGTGAGTGCTGTTTTGTTTAAAATTTACTTGCATGGTTATATAAACCAGCGTGTGCCTTAAGAATCATTGCAACACAGCATGCATCTTTTACGGTGTATCCTTCTCATTACTTGATCCTGTATAAGAAGTTTTCAACATGGCTTTGATCATCAATTTCTTATTGATCAGTTGATGACACATTGAAAGTTGTTCGAGTTTATGTACTGGCAATTAGAATTGTATTGATAGCATTCATGCATGTCTTGCAGTTCGAGAAGCAGAAAGGCTGGACTGGGGAATGAGAATAAGGATAGCTATGGGAATAGCTTATTGTCTGGAGCACATGCATCAGCTGACACCACCCATTGCCTATAAAAGCATACTATCTTCCTCTGTATATCTGACTGAAGATTATGCTGCTAAATTATCAGACTTTAGTTTCTGGACTGACATAGTCTCTACAAAAAAGGGTTCTGAAGCTGCACAGCTCTTAGAAACAGCTCCAGAATATATCAAGGCCAATGTTTACAGCTTTGGAGTTCTATTGTTTGAATTGATTACAGGAAGAATTCCCTTTGCAGTGGAGAATGGCTTATTTGAAGATTGGGCAGCAGAATATATAAAGGGACGACCCTTGAGAGACGTGGTGGATTCAAACCTGAACTCTTTGCAAGAAAATGAAATCGATAAATGGGAAGAAGTGATTAACAGCTGTGTAGATCCTGATCCAGAAAAAAGACCAACTATGAGGGAGGTTACTTCTAAGTTGAAGGAAATCACCACCATAGGACCTGATGGAGCAACTCCAAAAGCATCTCCTCTTTGGTGGGCTGAAATAGAAATTATGTCCACTGACTTAAGTTCAGACGTGAATCCATAACTCCAAATGAAAAATATGTCCTTTGGGATAATAATCTGAGTAACAACTCTGAATTTGGAGTTTGATGCCATTTTTTACTTGTTATTTTCGCAGTTAAGTTTTAGATTCTTGTTCTTTTGAAGCTAACTGAATTAGGATGGACAGAAGAAACAACTTTTGTCCCAGTAGAATGATTTCATTTTGTAGTTAGTTAAGGAATGAATTTGTTTTTATGCTCGTATAAATGAATTTTTCTTCTCTTTAGTGT