Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_22970 LG5 60938654 60939567 PREDICTED: phosphoenolpyruvate carboxylase kinase 2-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   peptidyl-serine phosphorylation, protein phosphorylation, protein phosphorylation, protein autophosphorylation, peptidyl-serine phosphorylation, peptidyl-serine phosphorylation, protein phosphorylation, cellular response to phosphate starvation, cellular response to phosphate starvation, protein autophosphorylation, intracellular signal transduction, protein autophosphorylation, cellular response to phosphate starvation, cellular response to phosphate starvation
Cellular Component   is active in   cytoplasm, nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   calcium-dependent protein serine/threonine kinase activity, calmodulin-dependent protein kinase activity, calmodulin-dependent protein kinase activity, calcium-dependent protein serine/threonine kinase activity, calmodulin binding, calmodulin-dependent protein kinase activity, protein serine/threonine kinase activity, calcium-dependent protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
G/A 60938711 missense_variant p.Gly20Ser
G/A 60938718 missense_variant p.Gly22Asp
A/T 60938729 missense_variant p.Thr26Ser
C/T 60938737 synonymous_variant p.Phe28Phe
C/T 60938738 missense_variant p.Arg29Cys
C/T 60938740 synonymous_variant p.Arg29Arg
C/T 60938757 missense_variant p.Ser35Phe
C/T 60938798 missense_variant p.Leu49Phe
C/T 60938812 synonymous_variant p.Thr53Thr
T/C 60938818 synonymous_variant p.Arg55Arg
C/T 60938827 synonymous_variant p.Leu58Leu
C/T 60938864 missense_variant p.His71Tyr
C/T 60938869 synonymous_variant p.Pro72Pro
C/A 60938973 missense_variant p.Pro107His
T/C 60939124 synonymous_variant p.Ser157Ser
C/T 60939145 synonymous_variant p.Gly164Gly
G/T 60939394 missense_variant p.Lys247Asn
C/G 60939509 downstream_gene_variant
T/G 60939546 stop_lost p.Ter269Gluext*?
T/C 60939549 stop_lost p.Ter270Glnext*?

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_22970.1
MHQEEEAPKKQQYQALEEIGRGKFATVFRCFHPSSNQFYALKLINNRLLTDATDRHCLEVEAKAMTFLSPHPNILKIIDAFQDAHTSTIILQLCQPRTLFDRIADGPLPESHAASLTKQLLEALTHCHALGLAHRDIKPENLLFDEANNLKLSDFGSAEWFGEGRSMRGVVGTPYYVAPEVIMGREYDEKVDVWSCGVILYTMLSGIPPFYGDSAAEIFEAVLRANLRFPSTIFRSVSLQAKDLLRKMICRDPSRRISALQALRHPWIFSSADLS*


CDS Sequence:
>Vu_22970.1
ATGCACCAAGAAGAAGAAGCCCCCAAAAAACAACAATACCAAGCGTTGGAAGAAATCGGTCGAGGCAAATTCGCCACCGTCTTCCGCTGCTTCCACCCTTCCTCCAACCAATTCTACGCTCTCAAACTCATCAACAACCGCCTCCTCACCGACGCCACCGACCGTCACTGCCTCGAAGTGGAGGCCAAGGCCATGACCTTCCTCTCTCCCCACCCCAACATTCTCAAAATCATCGACGCCTTCCAAGACGCCCACACCTCCACCATCATTCTCCAGCTCTGCCAGCCTCGCACCCTCTTCGACCGCATCGCCGACGGCCCTCTGCCGGAGTCCCACGCCGCCTCCCTCACCAAACAGCTCCTCGAAGCCCTCACCCACTGCCACGCGCTCGGCCTCGCCCACAGAGACATCAAACCCGAAAACCTCTTGTTCGACGAAGCCAACAACCTTAAACTCTCCGACTTCGGCTCTGCAGAGTGGTTCGGTGAGGGCAGGAGCATGCGCGGCGTGGTGGGCACCCCTTATTACGTGGCGCCTGAAGTGATCATGGGGAGAGAGTACGACGAGAAAGTCGATGTTTGGAGCTGTGGGGTTATTCTTTACACAATGTTGAGTGGCATTCCACCCTTCTATGGCGACTCTGCTGCAGAAATTTTCGAAGCTGTTTTAAGGGCTAATCTTAGGTTTCCTTCCACAATTTTTAGGTCTGTGTCTCTTCAGGCTAAGGATCTTCTTAGGAAGATGATCTGTAGAGATCCCTCTAGACGTATATCTGCACTTCAAGCATTGAGACATCCATGGATTTTTAGTAGTGCTGATCTTTCTTGA


Promoter Sequence:
>Vu_22970::LG5:60936654-60938654(+)
GTCAATTATGGCCCAGGCTGTTATTTGTTTTTACCGAATTTCTTTTTCTTTTTAGGCTACTGAAGAGTTTAAAGAAAACTACACAAAAAAGGTCATGTATTTTCTGCGTTATTCGATTTGTCTGATGCATGCAGAGGCTGTACATTGGATTTGCTCTATCTACTATTTAGAGGAAACTTCAGTTCACTTCTATCCAATTTGACTGATATTACTACACTGATGTGGACTTATAAAAGTGCTAGTAAAATATACTCAATATCATTTTTGTATTTAACGAAATATTAAGAACGTAGCACTTATTTTCAAATGAAGAAGGAAATTAAAACGCCAATGTTTAACTTTTCTGAACTTTGGATTACAGAATTTTAATTGCTATATTTTATAATAAATTTATATATAATATTTCTAACTGCATTGCAATTTTATTTTGAATCACCGCGTCATTGTATTCAGTTATTTTTTGTTCTTCATTTCATTCCATAACGTCTTTTGAGTGTATCATTTTATAGTTCTCTAGTTTATCTGTGGTCAAATTAATTTATGTCAGATTATATATGTTTTAATATTTATAAAGATCTAAATGTTTGGTTTTAATAAGAAAAGATTTATCTGTGATCAAGGAGATTTTTTCTCTCTCAATGGGTAAAAGTTCACACTTTCATTGGTTAGGGTTAAACATGTTATACGTTTTATTTTTTATTTTTTAAATAATACTTAAATTTTTTGAAAACCGAGTTTAACCAAAACGAGTTAGTAACATAACGTTTTTTTAATATGGATTACAAATGTTTTAAGAAAATAGTCTTTTTACATTTGAGTAATTTAATGTACAATATTTGATTAGGTGATAGTATGTAAACATGTAGGGGTTAAATGATCTGTATGTATACTTTAATTCAATTTATAATTAAATTATAGTATAACAAGATAGGGTTAATTTTTTTACTGAAGCACATGATGTGTAGTGACATGATATTATAAAAATTATTTAAATTTAAATAAATGTTTCCATTTAGTTACAGATTTTTTTTGGAAAATTAAAGTCACTAAAATTTCTTGTAATTATTTTAAACATTGACATTTAGATTGCTTTCTAATAAGCTAATGATGTAAAAAAAGTTATACTGGGTGTATTACGATTAAATTCTAAAATATAAATATTACTCGTTACCAATGCCTACTATTTCTCAGTCAGTATGAAACTAATAATTTTTTAGTAAGAAGTATGAAACTAATCTGAATACACAATATTCTTTTCAAGATAAAATACACAATAAATTTTGAAAGTAAGCTGAATATGATAAAACGAATATAATCTATCAATAAGAATAAAATATACTCGAACTGACATCAATTTGTTTTATCGGTTAATAAAAAGAACACTCATTAAACTTGTTTTTATATTTTATAAATAAAAAAATTAAGAAACGAGGAATCCAGTGGAGGCTATATCAGAGTATCATGTCATCATCTAATAATAGTTGTTACACCAAATAAGATTACTAATTTAAGCAATACCTATTCTAAATGGTTTCAAAACGCATATCTTGTATTTACAATTAAAATATTCTTTTAAAGATAAATTTTTATATTCCATCCAAAAGGGAATATTTTTGTCGTTAAATATATATATATTTTTTGAATAAATATGTTAAAAATCTTGACCATCTCTGTATTTTCCAAAATTTGACTACACTATATTTTTTACTTATAATACGGTGAGTTAAATATAATAAGGTGATTATTAAAAATATAAAACTATATATTGTGGAAAATTTAAAAAGAAAAGAAAAAGTAAAATTGGGGGTGGAAAGTTTGTGACGAAGGTGGAGCAGAGAGTTTGAAAAGGTGGCTGAATATTTAACAAGAGCACGGGCCCACAATAGAATTAACTGAATAACAATACTAGTGAATCCACGAATATCCTCTCATATATTCTTCACAAACACTGACTATTCTATATAAACACAAACACGTCTTAAATTCCACACAACAGAAAA


Gene Sequence:
>Vu_22970(+)
ATGCACCAAGAAGAAGAAGCCCCCAAAAAACAACAATACCAAGCGTTGGAAGAAATCGGTCGAGGCAAATTCGCCACCGTCTTCCGCTGCTTCCACCCTTCCTCCAACCAATTCTACGCTCTCAAACTCATCAACAACCGCCTCCTCACCGACGCCACCGACCGTCACTGCCTCGAAGTGGAGGCCAAGGCCATGACCTTCCTCTCTCCCCACCCCAACATTCTCAAAATCATCGACGCCTTCCAAGACGCCCACACCTCCACCATCATTCTCCAGCTCTGCCAGCCTCGCACCCTCTTCGACCGCATCGCCGACGGCCCTCTGCCGGAGTCCCACGCCGCCTCCCTCACCAAACAGCTCCTCGAAGCCCTCACCCACTGCCACGCGCTCGGCCTCGCCCACAGAGACATCAAACCCGAAAACCTCTTGTTCGACGAAGCCAACAACCTTAAACTCTCCGACTTCGGCTCTGCAGAGTGGTTCGGTGAGGGCAGGAGCATGCGCGGCGTGGTGGGCACCCCTTATTACGTGGCGCCTGAAGTGATCATGGGGAGAGAGTACGACGAGAAAGTCGATGTTTGGAGCTGTGGGGTTATTCTTTACACAATGTTGAGTGGCATTCCACCCTTCTATGGCGACTCTGCTGCAGAAATTTTCGAAGCTGTTTTAAGGGCTAATCTTAGGTTTCCTTCCACAATTTTTAGGTCTGTGTCTCTTCAGGCTAAGGATCTTCTTAGGAAGATGATCTGTAGAGATCCCTCTAGACGTATATCTGCACTTCAAGCATTGAGTATGTTTATTCCTTTCAATGTTCTAAATAAAAGTTATGATTCTTCTGTTACGCTATTAATTTATCTGTTATTTATTTGGTTGCAGGACATCCATGGATTTTTAGTAGTGCTGATCTTTCTTGA