Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23324 LG5 64335544 64337807 PREDICTED: putative protein FAR1-RELATED SEQUENCE 10
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, embryo development ending in seed dormancy, embryo development ending in seed dormancy, embryo development ending in seed dormancy, regulation of transcription, DNA-templated, regulation of gene expression, epigenetic, embryo development ending in seed dormancy, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, embryo development ending in seed dormancy
Molecular Function   enables   zinc ion binding
SNP Position Effect Amino acid change
A/T 64335672 missense_variant p.Glu43Asp
T/C 64336176 synonymous_variant p.Phe211Phe
T/A 64336549 missense_variant p.Ser308Thr
T/A 64336635 downstream_gene_variant
A/T 64336636 downstream_gene_variant
G/T 64337102 downstream_gene_variant
G/C 64337143 downstream_gene_variant
G/C 64337146 downstream_gene_variant
C/T 64337171 downstream_gene_variant
T/C,* 64337244 downstream_gene_variant
C/A 64337260 downstream_gene_variant
T/C 64337261 downstream_gene_variant
A/T 64337289 downstream_gene_variant
G/A 64337307 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23324.1
MTSIPSKNLCVRRQQCPCGDWKCYITYEGDSEEGSAAPEMVKEEKASSGAMITPYVGMVFKSDDDAFEYYGNFARKNGFSIRKERSRISPQLGIYKRDFVCYRSGFAPVKKKPNGEHHRDRKSVRCGCDAKMYLSKEVVEGVSQWFVVQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPIHRIVKMLEQEKGIQGGQLPFLERDVRNFVQNRKKVVLENEALLSEKRENDVLELLEACKVMKEADDEFVYDFTVDGNDKVENVAWSYGDSVNANVMFGDVVYFDTSYRSDETPQSFSWALQTFVRFMRGRCPQTILTDLDPGLRDAIISEFPATKHVVPQWNILPKVPCWFSPTLGSRYTEFKSEFDALFHIENTEEFELQWSQMISVFGLGSDKHADLLYTVRASWAQAYVRGYFLARMATITYSKSIDAFLKGIFSAHTCLRSFFEQVGISASVGGEWFQEYQSLAETLFQESSITKERSDYVRKELTKELNRILNEVRNLPEADGVCMNMSVSPAN*


CDS Sequence:
>Vu_23324.1
ATGACGTCCATACCTTCTAAAAACCTATGTGTTCGGAGGCAACAATGTCCTTGTGGAGATTGGAAGTGTTATATTACATATGAGGGTGATTCTGAAGAGGGTTCTGCGGCACCTGAAATGGTGAAGGAAGAGAAAGCATCGTCCGGGGCTATGATTACTCCTTATGTTGGAATGGTTTTTAAGAGTGATGATGATGCTTTTGAGTATTATGGCAACTTTGCCAGGAAGAATGGGTTCTCTATTAGGAAGGAAAGGTCTAGAATTAGCCCGCAGTTGGGGATTTACAAGCGAGACTTCGTTTGCTACCGCTCCGGCTTTGCCCCGGTGAAGAAGAAGCCTAATGGAGAACACCATAGAGATAGGAAATCAGTGAGGTGTGGATGTGATGCAAAGATGTACCTATCCAAGGAGGTTGTAGAAGGGGTTTCCCAGTGGTTTGTTGTGCAGTTTAGTAATGTGCACAATCATGAACTTTTGGAAGATGATCAAGTGCGTCTTTTGCCCGCGTATCGTAAAATTCATGAGGCTGATCAAGAGCGTATACTCTTGCTCTCCAAGGCAGGGTTTCCAATTCATCGGATAGTGAAAATGCTGGAGCAGGAAAAGGGGATTCAAGGGGGGCAGCTGCCTTTTTTGGAAAGGGATGTGAGGAACTTTGTTCAAAACCGTAAAAAGGTTGTTCTAGAGAATGAGGCATTGCTCAGTGAGAAAAGAGAAAATGATGTTTTGGAACTTCTTGAGGCGTGCAAAGTTATGAAAGAAGCAGATGATGAGTTTGTGTATGATTTTACTGTGGATGGGAATGATAAGGTTGAAAATGTAGCTTGGTCATATGGCGACTCAGTTAATGCAAATGTTATGTTTGGCGATGTTGTTTATTTTGACACATCTTATAGATCGGATGAAACACCTCAATCCTTCTCATGGGCATTACAGACTTTTGTCAGGTTCATGAGAGGAAGATGTCCACAAACTATTCTAACTGATCTAGACCCGGGACTTAGAGATGCGATTATAAGTGAATTTCCAGCAACTAAACATGTTGTCCCTCAATGGAATATTCTACCCAAGGTACCCTGTTGGTTTTCTCCTACTCTGGGTTCTCGGTATACAGAATTTAAATCTGAGTTCGATGCCTTATTTCACATTGAGAATACAGAGGAATTTGAACTTCAGTGGAGCCAGATGATTTCTGTGTTTGGACTTGGTTCAGATAAACATGCTGATTTACTATATACCGTTCGGGCATCCTGGGCACAAGCCTATGTAAGAGGTTACTTTCTGGCTCGAATGGCGACAATAACTTACTCAAAGTCTATAGATGCATTTTTGAAAGGGATTTTCTCTGCTCATACGTGTTTGCGTAGCTTTTTTGAGCAGGTTGGCATTTCTGCAAGTGTTGGAGGGGAATGGTTTCAAGAATATCAGTCTCTGGCTGAAACTTTATTTCAAGAATCATCAATTACAAAGGAGCGATCTGACTATGTGCGTAAAGAACTGACGAAAGAACTTAATAGGATTCTTAACGAAGTTAGAAATCTCCCTGAGGCTGATGGAGTCTGCATGAACATGTCAGTTTCACCAGCCAACTAG


Promoter Sequence:
>Vu_23324::LG5:64333544-64335544(+)
CAATGTGCTTAAATTTGTTGCAACAACAAGAACGAAAATAAACAAGAGTATAGTTCTGGAAAAGATGTGTGTCATGATTTTCATGAGCTATATGTGTTTTATTGCAAATTTGAGTTTGAAAGTGTCTAAACCAAACAAGCCAAGTATTTGTATGAAAATAAGTCCAAACGGCTTCAGTTAAACTACTATAAACCAAGCATACTAATATTATAAAACCTATATTTAAGATGTCTTGATCTAAAATGTATAATATAGATGATACTTACAGATACATTTTGGAAAATTGATATCCATCCAAAGATATTTTATGCTTCATGTATGCATTGTGTAAGGGACATAATTTTCCAATGCAAATGTGTGCCACATTTGTGTCAAAACCAGGAACATGTCTACGTTAGGATCAACTTCCCTAGATTCTGAAGTTAATAAATGAAAATATGTGAATTGTTTTGTGTGGTTGGTAAGAAGTATGCGTAGCAAATAAATGGTGTTTGTCATTTACTTTGCTCATGCGTATCATAATGTGCCCACTTACCTTTATTCTCCTTCCCTTTAGTGACTGAATTGATGGTAGCCTGGGTTTGTCCCTACTGAATTGGATGAGAGCCCAAGCACCCACATGCTATTCATATATACTGTTTGCTCCACCCCTAACAGAGTCACAAAAATCTAGCAGACTAAAAGAGCAATAACTGCAGATTAACACACGAGAATATAATATACCAACAACTGATTTTTTACACTTTAATGTAATTACAGATGGTCCTGTTTGATAACTTCATCAGTAACTTTTTAACCAATAAATGCATTTGAACTGACTATGCATAGAGAATATTGTTTCTTTAATCTTCTACAGTCGGTGGCATCACTTGTATAACCTAATCCCTAGTAATTTTCAAACCTGAAAAAAAAAACAGTAATCTGACTTTTTATCTCAGGAGGTAAAATTACTTTACAATGCATATAAAACTTTATGCCATAACATCCTTTTTGGTCCATAAGAACCACAGCAAGAGGTTCTAAAAGATGCACACATAAGGACATTACAACCCATAGGCACAAGAATGAGAACCAGAGAAAGTTGCATCTTATACATCAACTTATCCAGAAAGGAACTTGATATCTGTTTTGCACCCTTGAGAAATTCTATCACATTATCCCAAAAGAGCAACACTTTTTCCTCCCTTTTGAGCAACTTCTAAATTAAAATTTAATCAGCAGCGTATATCAATCCGTTGTCTTAACTCCCAAACAAACAATTTAGCACTAAACAAGACTTAGATACAACATAGATACTAGTTAACAAGTGTTGTTTTTTTTAATTGAAACATACATTTAATCTCAATAGTTCTTGCCACTTCTAATCGTCAATATAAATGCAGCATGTAAAGAGATGAAATTTCAATTTTGATTGAAGGTCGGAATGATGTTACTACCTTTATTTTCCTTTTGACAAAATTGAATTTTATTGTATCACCTCAAAACGCTCTGTGGGCCGAGGCCTTAAAATCCTTCTTATTGTGGAGGCCCAATAACCAATAAACAAACTAGCTCAAAATGAAAATCCCAAATTGAATTTATTTTCCTTTTGGTGGAATTCTCGGCATTGTCAAAAAACAATAACAGGTGTTGGGAACACGATGAACCAGAGAACAAGGGTTTAAGCTCTCTGCACTCCTCACTCTGAGGTATGTCGCTTTCATTAATTTTCTTAAAACATATGTCTTTGCGTTCAACCAAGTTTTCCATTTCCCTTGGGACAAATATTTTCAAGCTTCTCTTTCTGTCAGCCTAAAACCTCTTTATCTTGTCAATTTCAATATCTGCTTTGGGAATTTTTCGGTATAAGAAAATAAATCTTCTTTTTTTTATTTACCTTGCCCATTCTTCGATTTTCTTCATTTTCTGCTCATGTTAAGGTTTTTGGTTTGTTTTTTAACACTAAATGTTTCTGGGTCTCTTCAAGGTTTGAAACTACTAATTACGACACTCCATTCAAA


Gene Sequence:
>Vu_23324(+)
ATGACGTCCATACCTTCTAAAAACCTATGTGTTCGGAGGCAACAATGTCCTTGTGGAGATTGGAAGTGTTATATTACATATGAGGGTGATTCTGAAGAGGGTTCTGCGGCACCTGAAATGGTGAAGGAAGAGAAAGCATCGTCCGGGGCTATGATTACTCCTTATGTTGGAATGGTTTTTAAGAGTGATGATGATGCTTTTGAGTATTATGGCAACTTTGCCAGGAAGAATGGGTTCTCTATTAGGAAGGAAAGGTCTAGAATTAGCCCGCAGTTGGGGATTTACAAGCGAGACTTCGTTTGCTACCGCTCCGGCTTTGCCCCGGTGAAGAAGAAGCCTAATGGAGAACACCATAGAGATAGGAAATCAGTGAGGTGTGGATGTGATGCAAAGATGTACCTATCCAAGGAGGTTGTAGAAGGGGTTTCCCAGTGGTTTGTTGTGCAGTTTAGTAATGTGCACAATCATGAACTTTTGGAAGATGATCAAGTGCGTCTTTTGCCCGCGTATCGTAAAATTCATGAGGCTGATCAAGAGCGTATACTCTTGCTCTCCAAGGCAGGGTTTCCAATTCATCGGATAGTGAAAATGCTGGAGCAGGAAAAGGGGATTCAAGGGGGGCAGCTGCCTTTTTTGGAAAGGGATGTGAGGAACTTTGTTCAAAACCGTAAAAAGGTTGTTCTAGAGAATGAGGCATTGCTCAGTGAGAAAAGAGAAAATGATGTTTTGGAACTTCTTGAGGCGTGCAAAGTTATGAAAGAAGCAGATGATGAGTTTGTGTATGATTTTACTGTGGATGGGAATGATAAGGTTGAAAATGTAGCTTGGTCATATGGCGACTCAGTTAATGCAAATGTTATGTTTGGCGATGTTGTTTATTTTGACACATCTTATAGATCGGTCACTTATGGATTGCTTTTTGGAGTATGGTTTGGTATTGATAGCTATGGTAGAACTATTTTTTATGGTTGTGTTTTGTTGCAGGATGAAACACCTCAATCCTTCTCATGGGCATTACAGGTTTACTACTAGCATCCTCTGTATAAGATAAGATTTTACTTGTTCTTTTGTAAAACTCCTCTTATGGTGATTATTCCTCAATACAGACTTTTGTCAGGTTCATGAGAGGAAGATGTCCACAAACTATTCTAACTGATCTAGACCCGGGACTTAGAGATGCGATTATAAGTGAATTTCCAGCAACTAAACATGTTGTCCCTCAATGGAATATTCTACCCAAGGTACCCTGTTGGTTTTCTCCTACTCTGGGTTCTCGGTATACAGAATTTAAATCTGAGTTCGATGCCTTATTTCACATTGAGAATACAGAGGAATTTGAACTTCAGTGGAGCCAGATGATTTCTGTGTTTGGACTTGGTTCAGATAAACATGCTGATTTACTATATACCGTTCGGGCATCCTGGGCACAAGCCTATGTAAGAGGTTACTTTCTGGCTCGAATGGCGACAATAACTTACTCAAAGTCTATAGATGCATTTTTGAAAGGGATTTTCTCTGCTCATACGTGTTTGCGTAGCTTTTTTGAGCAGGTATGTTTGCGAGAAGTATCTTGTCTTGTATGCTTGCACTAGCCTAGATGCTGACTTGTCATTCTAATGATTTTCTTCTACTTGTCATTCTTATGCTTGCAGGTTGGCATTTCTGCAAGTTTTCAACATCAAGTATTTAAGGAGACTCAATATATTCAGCTCAAAACTTGCATACCGATTGAAGAGCATGCGCGGAGTATTCTCACTCCTTTTGCTTTTAATGCCTTGCAGCAAGAGCTGTTGCTAGCAATGCAATATGCTGCATCCGAAATGGCCAATGGATCATATATTGTGCGGCATTTCAAAAGGATGAACGGAGAACGGCTTGTAATATGGTTGGTTGAAGATGATCAGATACATTGTTCTTGCAAGGAATTTGAATCCTCTGGGATACTATGCAGGCATGCTCTTCGTGTATTTGTAATAAAGAACTACTTTCAGTTACCTGATAAGTACTTTTTAGGTAGATGGAGGCGGGAATGCTCATTACTTGTTGATGATGATAATAATAATCAAGGTGTTGGAGGGGAATGGTTTCAAGAATATCAGTCTCTGGCTGAAACTTTATTTCAAGAATCATCAATTACAAAGGAGCGATCTGACTATGTGCGTAAAGAACTGACGAAAGAACTTAATAGGATTCTTAACGAAGTTAGAAATCTCCCTGAGGCTGATGGAGTCTGCATGAACATGTCAGTTTCACCAGCCAACTAG