Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23395 LG5 64960497 64963288 PREDICTED: probable WRKY transcription factor 31
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cellular response to phosphate starvation, cellular response to boron-containing substance deprivation, cellular response to phosphate starvation, negative regulation of transcription, DNA-templated, cellular response to boron-containing substance deprivation, negative regulation of transcription, DNA-templated, cellular response to phosphate starvation, negative regulation of transcription, DNA-templated, cellular response to phosphate starvation, cellular response to boron-containing substance deprivation, cellular response to boron-containing substance deprivation, negative regulation of transcription, DNA-templated, cellular response to boron-containing substance deprivation
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
C/A 64960593 5_prime_UTR_variant
C/A 64960609 5_prime_UTR_variant
T/A 64960611 5_prime_UTR_variant
T/C 64960852 synonymous_variant p.Arg49Arg
C/A 64960854 missense_variant p.Pro50His
G/A 64960886 missense_variant p.Val61Ile
T/A 64961039 intron_variant
T/C 64961040 intron_variant
T/A 64961045 intron_variant
C/T 64961062 intron_variant
G/A 64961188 synonymous_variant p.Ser125Ser
A/G 64961202 missense_variant p.Lys130Arg
T/A 64961291 intron_variant
G/A 64961387 synonymous_variant p.Lys153Lys
T/A 64961443 missense_variant p.Leu172His
A/G 64961501 intron_variant
T/A 64961555 intron_variant
G/A 64961655 intron_variant
T/A 64961729 synonymous_variant p.Gly203Gly
C/A 64962063 splice_region_variant&intron_variant
A/G 64962138 intron_variant
A/G 64962344 intron_variant
A/G 64962615 synonymous_variant p.Thr421Thr
G/A 64962618 synonymous_variant p.Leu422Leu
A/T 64962822 missense_variant p.Glu490Asp
C/T 64962930 synonymous_variant p.Ser526Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23395.1
MDKGWGLTLDTSSSQSLSSFPSKQPSTSFSKLTSDTMFPLLGFPVNLSRPAAKDDEHNRKVVGEVDFFSDRITKPTSPPSHDQHVKPNIVKKEIVETPLHVNTGLQLLTANTGSDQSTVDDGVSSDAEDKRAKTTELAQMQVELQRMNEENKKLKEMLSHVTGNYTALQMHLMTLMHQNQRTENTENEVVQGKADDKNHAVGGGKVPRQFLDIGPSGAAEADDQVSDSSSDERTRSSTPQNNNIEVGTRDGVRNVNAKRELGREESPESESQGWGPNKLQKVNPSSAIDQSTTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILVTTYEGTHNHPLPPAAMAMASTTTAAASMLLSGSMSSADGIMNPNLLARAIIPCNSSMATLSASAPFPTVTLDLTHNPNPLQFQRPATPFQVPFLQGQPQNFGSVATPIAQAQTLYNQSKFSGLQLSQEVGSSQLAAQASRPPLQSSQQPSSADTVSAAAAAITSNPNFTAVLAAAISSIIGGSHNANNNTNNNNNSTSRTTISSFSGN*


CDS Sequence:
>Vu_23395.1
ATGGACAAAGGATGGGGACTCACCCTTGACACCTCTTCCTCGCAATCTCTCTCATCATTCCCTTCCAAACAGCCTTCCACTTCTTTCTCCAAACTCACCAGCGACACCATGTTCCCTCTCCTCGGATTCCCCGTCAACCTTAGCCGTCCCGCTGCCAAGGACGACGAACACAACCGCAAAGTCGTCGGTGAAGTCGACTTCTTCTCTGATAGAATCACCAAACCAACCTCCCCACCCTCCCACGACCAACACGTTAAACCCAACATCGTCAAGAAGGAAATTGTTGAAACACCTCTCCACGTTAATACTGGTTTACAACTCCTTACTGCTAACACCGGGAGTGACCAATCGACCGTCGATGATGGGGTTTCATCGGATGCAGAAGATAAGCGAGCCAAAACCACCGAGCTTGCACAGATGCAAGTGGAGCTTCAACGCATGAACGAAGAGAACAAGAAGCTGAAAGAGATGCTGAGCCATGTTACCGGTAACTACACGGCCTTGCAGATGCATCTCATGACATTAATGCATCAGAACCAGCGCACTGAGAACACAGAAAATGAGGTTGTTCAGGGAAAGGCGGATGATAAAAATCATGCTGTTGGTGGTGGAAAGGTTCCAAGACAGTTCCTTGATATAGGTCCCAGTGGCGCAGCCGAAGCAGATGACCAAGTGTCTGACTCTTCCTCCGATGAGAGAACACGATCGAGCACACCTCAGAACAATAACATTGAAGTTGGAACAAGAGACGGTGTGAGAAATGTTAATGCCAAAAGAGAGTTGGGTAGGGAAGAGAGCCCAGAGTCAGAATCCCAAGGTTGGGGTCCTAATAAGCTTCAGAAAGTTAACCCTTCCAGTGCTATCGATCAGTCCACTACAGAAGCCACAATGAGAAAAGCTCGTGTCTCAGTTCGTGCTCGATCAGAAGCTCCCATGATAAGCGATGGCTGCCAATGGCGAAAATATGGACAAAAAATGGCCAAGGGGAACCCATGTCCTCGAGCATATTATAGATGCACTATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTTCAACGTTGTGCTGAGGATAGAACGATTTTGGTTACAACTTATGAAGGTACACATAACCATCCACTGCCACCTGCCGCTATGGCCATGGCGTCAACCACTACAGCTGCTGCTAGCATGTTACTGTCAGGGTCAATGTCCAGTGCAGATGGAATTATGAACCCCAATTTGCTTGCCAGAGCAATCATTCCTTGCAATTCTAGCATGGCAACACTGTCAGCTTCGGCACCATTTCCAACTGTGACTTTGGACCTCACGCATAACCCGAACCCGTTGCAATTTCAGAGACCAGCTACCCCATTCCAAGTGCCCTTCCTCCAAGGGCAGCCTCAGAACTTTGGATCCGTAGCCACCCCAATTGCGCAAGCACAAACACTTTATAATCAATCAAAATTCTCTGGTCTTCAACTATCTCAGGAAGTAGGTTCTTCCCAGTTGGCTGCACAAGCTTCTAGACCACCCTTACAGTCTAGCCAGCAACCCTCGTCGGCTGATACAGTCAGTGCCGCCGCGGCCGCTATCACCTCCAATCCAAACTTCACCGCCGTCCTCGCCGCTGCAATCTCCTCTATCATAGGCGGTTCTCATAATGCAAACAATAACACCAATAACAACAACAACAGCACAAGCAGGACTACCATCAGCAGCTTTTCAGGAAACTGA


Promoter Sequence:
>Vu_23395::LG5:64958497-64960497(+)
GAAATTCAAATCAGTGTATACATGTTTTGAGTGTTATGATTTTTATAATGGAAGATTGAAGGACCAGAGAGAGATCTTAAACGTAGTGGAAGGTTGTACTAAAGAAGTAGAATACAATTATAGAATTGAAGAGATTATAGATTAAAAATAATGTGGAGGGAGGGGTGTGAGGAGAAGAGGAGGGTCCCACAGGTAAAGAGTCAACAAGGTACCCGGGGTTTGGGATCTGAAATGAGGTGAGTGGGACCATGCAAAGACTAAGTTACTTGGGCAACCAGTCTTCAGTCACCCTACGACAGAGAGAGAGAGAGAGAGAGGGAGAGCCGGGCCGTCAAATTGGTCGACTTGGCTTTTCCTTTATTGTGTTTTCTTGTTGAATTTGTGTGTGCTGAGAGAGAAAAAGAGAAAATGGGATCATTTTCATCACGTGTATCGTTTGCGCACTATTCGGGGGGCGGTGGCTCTTTTTCTTCCTCATTTATGAGTCAGTCAAATCCTTTCTTCACGAAACCCCCCGCACGTCGATACTTTTATCCAACACATTTCTTTTTTCTTCACCATTTAAACTTCTTTTCCCTTTTTAAAATCAGGAGAGAGAGAGAGAGACAAAGACTGCTGCTCCCGGTACTATCCAATAAATTCACTTATCGGGTCGGGTTTTGCTTCTTAATGGATCCACCTTCATCCAACAACTTCCAGAATCTATTCAATTACCATATCCTTTTCTCTTTAGTTAAAGATATGTTGCCTCGGGATTGCATTTCCATCACGTACTCCTAAATCTGACTATGGTCTTAAAGTACGGCTTTCTGGGGAACATATTATTTTAACTCGTTTTTTAAACATACAATTTATAATATTTATGACTAAGGCTTTATTTTGGATTTGAGAGGAGGGAGTAAATGAATTTGAACAAATTTAAGAGTAAATTGTGTGATATTTTTAAAGATTTAAAGGTGATTAATAATAGATTTAAAAGTAAAAAATTTGTATAGAATTTGACTAATGGATAAATAAAAAAATATTTTAATTTATAAGAATTAAAAATTATTAAAATGCTATTAGTGGTAAAAGTATTGGTAAAAAATATTTTAAATAGTAAAATAAATTAAAATTAATTAAAAAATAAAATAAAATAATATTTAAGTGTAAAAGCTTGGAACGTAGAAGTTGGAACTGGTTACGCCAAGCTCTGGAATGAGTTCCAGCAGTGAAATCAGTTACGTTATCTTCATCGTATGCAACATCTTCGTGAACTTCCTTCACGACCATGCTTCAAAACAGTAAGATCTGTTTACTGTAACTTACCTTTATTATATCCTATGATTTATCTATTAATATGATTTATCTATTAATACGGTTATACAAATGTAATCCATCCACTTTACAATTTATTACAAAGTAAGTACACGAATATATAATCAATTACATCCATTTCAGAATTAATTACAACAGTTTACTTTAGCGGTGAAAGTTAAAAATCATTAAATTATATGAAGGCAAAAGATAACATTTCCTATCAATTCTTTTCAAATATGCATATAAATAGTGATAGAAAAACCATGTATTTCACAAATTCATCATTTTTCTTGCTTCCAAACCACTATATGTAAACATGATTTCAGTCTTCAATTCGTTTATATCAATCTTCTTGAATAGTACTGTTCAAATAAATGCACTGTAAGTATATTCTTAAACCAGAAGAGAAAATTAGTAAACAGTAAAAATTTAATAACGGTAATTTTAATTAAGAACTAATATTAATTATGTTTGTCATACAGTAACATAGGAAAAAAAAAGATTAGTAATTTTGGTTGGAAATGGTTTAGGTTTGAAAGAGGAGATGAAATCCGGGTCGGGTTGTGAGGTGTGAACTGGGGAGGTGGACTGGGTATGAACTGTGGGCGGGTACATGTTGGAGAATAGACATTGTCCATCGATGACGCACCATCTGGCGCAATAATTTGATAAATTTTTCACAAATGTCCAATTTCGATTTC


Gene Sequence:
>Vu_23395(+)
CCATTTGGTCCACGCTCCTTCTATCCCTCCAACTCTTTTTATACCCAACCCCATTGCACTGGACAAAGACTTCATTTCCTGATACCATTCCCACCCCTCTCTTTCTCTTTCTCTTTCTTTCTCTCTTTCTCTCCAGTTTCCCTTCATTTCTATTTCTCATACTATTCTTCTACCTCTTTCAACTCTTTCTTCCTTCTTCTGCTTGTTTTATGGACAAAGGATGGGGACTCACCCTTGACACCTCTTCCTCGCAATCTCTCTCATCATTCCCTTCCAAACAGCCTTCCACTTCTTTCTCCAAACTCACCAGCGACACCATGTTCCCTCTCCTCGGATTCCCCGTCAACCTTAGCCGTCCCGCTGCCAAGGACGACGAACACAACCGCAAAGTCGTCGGTGAAGTCGACTTCTTCTCTGATAGAATCACCAAACCAACCTCCCCACCCTCCCACGACCAACACGTTAAACCCAACATCGTCAAGAAGGAAATTGTTGAAACACCTCTCCACGTTAATGTAATTAACCTCCCTAAACTCCTTATTTTTTTCTCTTTTTATTTTTTTCCCGGATTATTTATTATTTTCTTCTTCTAAATTTCCTTTTTTTTTTCTCTCTCTCTCTAGACTGGTTTACAACTCCTTACTGCTAACACCGGGAGTGACCAATCGACCGTCGATGATGGGGTTTCATCGGATGCAGAAGATAAGCGAGCCAAAACCACCGAGGTGCATATTTTTATTTTATTTACAAATCCTACTTATATATTTCTGGTTTGTGGTTATTTAAGTTTTTATTAACCGTAAAATTGTGAAATTGATAAGTATTTGCTTTTTTATCCAGCTTGCACAGATGCAAGTGGAGCTTCAACGCATGAACGAAGAGAACAAGAAGCTGAAAGAGATGCTGAGCCATGTTACCGGTAACTACACGGCCTTGCAGATGCATCTCATGACATTAATGCATCAGAACCAGCGCACTGAGAACACAGAAAATGAGGTGCTTATAAATTAAATTTACAAATACTTTTCTTGAATTGCCCTACCTTTTTTTTTTTATAATTATAGTGAAGAGACTGAAATTGCTTTGCATACAGTGAATAACACGGTTATTGTATGATTTTGTTTTGTTTACGCAAACGATCTGGATTGGATTTGAAACGTGTTAATAATATATAATGTTGAAATTCAGGTTGTTCAGGGAAAGGCGGATGATAAAAATCATGCTGTTGGTGGTGGAAAGGTTCCAAGACAGTTCCTTGATATAGGTCCCAGTGGCGCAGCCGAAGCAGATGACCAAGTGTCTGACTCTTCCTCCGATGAGAGAACACGATCGAGCACACCTCAGAACAATAACATTGAAGTTGGAACAAGAGACGGTGTGAGAAATGTTAATGCCAAAAGAGAGTTGGGTAGGGAAGAGAGCCCAGAGTCAGAATCCCAAGGTTGGGGTCCTAATAAGCTTCAGAAAGTTAACCCTTCCAGTGCTATCGATCAGTCCACTACAGAAGCCACAATGAGAAAAGCTCGTGTCTCAGTTCGTGCTCGATCAGAAGCTCCCATGGTACGTCTGATGCTATATATATAGTATGTTTTATCAGTTTATTAATTAATTTACAAACTATTAAAGGCAGCGATGACTAGTAAATTGCTTCTCTAACTCAATGGATCTGTTGCAGATAAGCGATGGCTGCCAATGGCGAAAATATGGACAAAAAATGGCCAAGGGGAACCCATGTCCTCGAGCATATTATAGATGCACTATGGCAGTTGGTTGCCCAGTTCGCAAACAAGTGAGTTTTTCTGATTGATCAATTTATATTAGTACCATCAACAAGATCTATTAACTATATAATAAGTGTGTCAAGCATTGTGGCCCAGACTAATTGAAATTTCATGGTCTTTATTAGGTTCAACGTTGTGCTGAGGATAGAACGATTTTGGTTACAACTTATGAAGGTACACATAACCATCCACTGCCACCTGCCGCTATGGCCATGGCGTCAACCACTACAGCTGCTGCTAGCATGTTACTGTCAGGGTCAATGTCCAGTGCAGATGGAATTATGAACCCCAATTTGCTTGCCAGAGCAATCATTCCTTGCAATTCTAGCATGGCAACACTGTCAGCTTCGGCACCATTTCCAACTGTGACTTTGGACCTCACGCATAACCCGAACCCGTTGCAATTTCAGAGACCAGCTACCCCATTCCAAGTGCCCTTCCTCCAAGGGCAGCCTCAGAACTTTGGATCCGTAGCCACCCCAATTGCGCAAGCACAAACACTTTATAATCAATCAAAATTCTCTGGTCTTCAACTATCTCAGGAAGTAGGTTCTTCCCAGTTGGCTGCACAAGCTTCTAGACCACCCTTACAGTCTAGCCAGCAACCCTCGTCGGCTGATACAGTCAGTGCCGCCGCGGCCGCTATCACCTCCAATCCAAACTTCACCGCCGTCCTCGCCGCTGCAATCTCCTCTATCATAGGCGGTTCTCATAATGCAAACAATAACACCAATAACAACAACAACAGCACAAGCAGGACTACCATCAGCAGCTTTTCAGGAAACTGAACCTTTTTCCTCATCGTTCCATTTTTTGGTTAATACCATTATTCCATAAACTTTGTATTTTTGTACATGGGTATAAGGGAAAATGACACCGTAAATGTTCATATTCTTATTAGACCATGTCATGGGAGGGAGGGATATATTAGATCAGAAAATGTTTAATTTATTTGTACCATTTCTTTTCCTTTGAATAATGTTGTATATTTGATTCAAAAATTCTCGGGAG