Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23397 LG5 64982256 64983388 PREDICTED: mitogen-activated protein kinase kinase kinase A-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, abscisic acid-activated signaling pathway, response to osmotic stress, abscisic acid-activated signaling pathway, protein phosphorylation, response to osmotic stress, signal transduction, abscisic acid-activated signaling pathway, response to abscisic acid, abscisic acid-activated signaling pathway, response to abscisic acid
Cellular Component   located in   nucleus
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, MAP kinase kinase kinase activity, MAP kinase kinase kinase activity, protein kinase binding, protein serine/threonine kinase activity, protein binding, MAP kinase kinase kinase activity
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
A/G 64982310 missense_variant p.Ile19Val
C/G 64982411 synonymous_variant p.Leu52Leu
T/A 64982420 synonymous_variant p.Pro55Pro
T/G 64982762 synonymous_variant p.Gly169Gly
T/A 64983119 synonymous_variant p.Ser288Ser
G/A 64983215 synonymous_variant p.Arg320Arg
C/T 64983312 downstream_gene_variant
T/C 64983370 splice_region_variant&intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23397.1
MDWTRGHMLGRGSTAAVYIAESRRSGRVFAVKSAELHRSEFLQREEMILSTLRCPHIVAYQGFDTTFENGVYWFNMFMEYAPHGTLAERGGGMEEALVGSYTRQILQGLHYLHSSGIVHCDVKGQNVLVTEKGVKIADLGCARRVGEVSVIAGTPAFMSPEVARGEQQGFPADVWALGCTVLEMITGKPPWHGVGDPAGVVYRIGFSDELPEIPSCVSEQGRDFLGKCLKRDPNERWSVEELLGHGFVKECTELKLLLLDSDTPTGVLERGFWDSLETTEHGARDCPSPTDRIRSLFSDEPLWIWKNDDDNDDEQWVTVRSNEFHEELSFHKTETTFNMRQKL*


CDS Sequence:
>Vu_23397.1
ATGGACTGGACTCGAGGCCACATGCTCGGCCGTGGTTCCACCGCGGCCGTCTACATCGCCGAGTCCCGCCGATCCGGTCGAGTCTTTGCCGTCAAGTCTGCAGAGCTACACCGGTCGGAATTCCTCCAAAGGGAGGAGATGATTCTTTCCACTCTCAGGTGTCCTCATATTGTTGCCTACCAAGGTTTTGACACCACGTTTGAGAACGGTGTTTACTGGTTCAACATGTTCATGGAATACGCGCCTCATGGGACGCTGGCGGAGCGCGGTGGTGGCATGGAAGAAGCGTTGGTGGGATCCTATACCCGCCAAATTCTGCAGGGGCTGCACTACCTCCACTCCAGTGGGATAGTGCATTGCGATGTGAAGGGGCAGAATGTGTTGGTGACGGAGAAGGGGGTGAAAATTGCGGACTTGGGCTGTGCTCGGAGGGTGGGGGAGGTGTCCGTCATCGCCGGCACGCCGGCGTTCATGTCTCCTGAGGTAGCGCGTGGGGAGCAGCAGGGTTTCCCTGCTGACGTGTGGGCTCTGGGGTGCACAGTGCTGGAGATGATCACCGGGAAGCCACCATGGCACGGCGTCGGCGACCCGGCGGGAGTGGTTTACAGGATCGGATTCTCCGATGAGTTGCCTGAGATTCCTAGCTGTGTGTCAGAGCAGGGGAGGGACTTTTTGGGAAAGTGTTTGAAGAGGGACCCGAATGAGAGGTGGTCGGTGGAGGAGCTTCTTGGACACGGTTTTGTTAAGGAATGCACGGAATTGAAGTTGCTTTTGTTGGATTCAGACACTCCCACTGGTGTGTTGGAACGAGGATTTTGGGATTCCTTGGAGACAACCGAGCATGGAGCACGTGATTGTCCCTCTCCTACGGACAGAATTCGTAGTTTGTTTTCGGATGAACCCCTTTGGATATGGAAAAACGATGATGATAATGATGATGAGCAATGGGTGACGGTGAGGAGCAATGAGTTCCATGAAGAATTATCCTTTCACAAAACAGAGACTACTTTTAATATGAGGCAGAAACTGTGA


Promoter Sequence:
>Vu_23397::LG5:64980256-64982256(+)
ATTGGATTCCACTAATTCCAAACCCACGACGAAAACTATAAATACATATCAAAAGGTAAGAGGTATGTAGATTGCATTTACTATACATTTATATGAGCTACCGAACGGATAACATACTGACTTTAGCATCTGAGAACCTTTGACAAGTGCACCTCCAGATAGTGGAACGAAGAGAAAAAAATTAAGAAAGCAACCGAATGACGCTTAAAGAGAAATTGTGAAGGTGTTTAGAGTACCTCGATCCACTTTCAAAACATTATTATTATTATTATCGATGATGGAGTGTGGAGTGGCGTTTAGAAGGTGAGGTGTGCATGACTAAGAGTGTGAGGCAAGCATTGGGTCCGTTTGGGAGGGATGGTAAAGAAATAATGAATTACATGAATTTGGAAAGGTAAAGCGGATATAGTGGATTATGCAGCGTGATCCGATGCATGCATTGCATTGCACACTCAGAAACGGAGGAATCAAAGCAAAGAGTGGTTTTTGCTATAAAAATGGTTGGCGGCATGTGATGTGATCATACCATTCACACTTTAATCATTGGTTTCCTTCATATTGACTCTTCCTCCGATGCCCTCACATTACGCACGCAAAGCGTCAACGTCTAAGCTCTCTTCTCCACTTTCACCTTATTCCTTTCAACAAAATACCTTCCAACAACAACAACACTTGTACTAATACTAACGCTCCAAACACTTTAATTTATAGTTAACTACTACTCCACAATGTGAATGTGAATGTGATTGGACAGCCTGGTTGGTTCCTGCTTTCTTTTTTTTAAATCACTGCTCATTAGGGTTAGTTGGATTTGGCCTTTTCTCCTTTATCCGCATTCCAACTGTCCAATATGCGCAAACCAACATCCTTGCCTTTCACCACTCCTTCCGCTTTACACTCATCATCATCACAAATTAACTTCTATCTCTTACTGCCTTTTTGCCTTTAAATTGACTTTCACTGTTACAGTTTTTGTTTCATTTGCTTCGCATACAATCCACCTAACTCACCACATCAACCGCTACTTCGTTTTAAATAAAACCACCCTTTGACTTCAAAACTAATCCAGAAGACGCATGTGGTTGATTAGGAGGGAAGAAAGAGGCCTGCAAGAATTAATCCTCCACTGCACCATATCTAATGGTTTCAGTTCCATACAGTATATTCCAGATGCTGGTATCAATCCAAGGATTGAAGCATTGTTCGGCACAACCCATCTATATTTGACAGCAGGGAGGCAACAGGGACCAGTACATTGTTTAATGTTTACTAGCGACAGATGGAGCTAGGAATATAACAAGTGAGGCCCTTCACACAGAAATTGAGGCGCATCTTTTTATCTTTCCTTGGTGGGTCCTCAAAGATATAACACAACATTTTTAACAATTTAAGATGGCCATGGAAAATGGCACCACAGTGTTCCACTCCATGCCGCTCCCCCTGAACCACCCATGATTCACGAAGCACGCTCACTCACTAACACCGCAATCTTTGGCTCTCACCCCTTCTCACCATGAAGCACGTGCCAGCATGTGCACCGCCACCTTAAAACCTAGCTAACTCATCCATTCATTCATCATTCATCTATTCATGCCTGTCTAAAGCCAAGTAACACACAGCCATAGCCTGGCCGGCCAACAACAAAAGCTCCCACACCCATCCCTTTGACACGTGGACCTCTCCCATCTCTAGATCGTGAAAGGACAAGACGGCGGCCGTCCATTGGACACAAGCAAAAAAGTGCAATGCAAACAAAAATTAAACCCTTTCCACCTCATCATTACTTCTTTTCTTACCCTCTGCGTTAAGCCAACCACAACACACCAAACCCCTTTACCTTAACCTTCCACAAATATGTATATATATATAAATCTTCAATTTCAGAAACTTATCTCCCAACTACATCCCACTTCAAACCACACTATAATACTATAATTAACATCATTCACTCCCTTCTCATCTTAAACTCCCTCACAAGTTAAAGATTAAACTTTTCGACA


Gene Sequence:
>Vu_23397(+)
ATGGACTGGACTCGAGGCCACATGCTCGGCCGTGGTTCCACCGCGGCCGTCTACATCGCCGAGTCCCGCCGATCCGGTCGAGTCTTTGCCGTCAAGTCTGCAGAGCTACACCGGTCGGAATTCCTCCAAAGGGAGGAGATGATTCTTTCCACTCTCAGGTGTCCTCATATTGTTGCCTACCAAGGTTTTGACACCACGTTTGAGAACGGTGTTTACTGGTTCAACATGTTCATGGAATACGCGCCTCATGGGACGCTGGCGGAGCGCGGTGGTGGCATGGAAGAAGCGTTGGTGGGATCCTATACCCGCCAAATTCTGCAGGGGCTGCACTACCTCCACTCCAGTGGGATAGTGCATTGCGATGTGAAGGGGCAGAATGTGTTGGTGACGGAGAAGGGGGTGAAAATTGCGGACTTGGGCTGTGCTCGGAGGGTGGGGGAGGTGTCCGTCATCGCCGGCACGCCGGCGTTCATGTCTCCTGAGGTAGCGCGTGGGGAGCAGCAGGGTTTCCCTGCTGACGTGTGGGCTCTGGGGTGCACAGTGCTGGAGATGATCACCGGGAAGCCACCATGGCACGGCGTCGGCGACCCGGCGGGAGTGGTTTACAGGATCGGATTCTCCGATGAGTTGCCTGAGATTCCTAGCTGTGTGTCAGAGCAGGGGAGGGACTTTTTGGGAAAGTGTTTGAAGAGGGACCCGAATGAGAGGTGGTCGGTGGAGGAGCTTCTTGGACACGGTTTTGTTAAGGAATGCACGGAATTGAAGTTGCTTTTGTTGGATTCAGACACTCCCACTGGTGTGTTGGAACGAGGATTTTGGGATTCCTTGGAGACAACCGAGCATGGAGCACGTGATTGTCCCTCTCCTACGGACAGAATTCGTAGTTTGTTTTCGGATGAACCCCTTTGGATATGGAAAAACGATGATGATAATGATGATGAGCAATGGGTGACGGTGAGGAGCAATGAGTTCCATGAAGAATTATCCTTTCACAAAACAGAGACTACTTTTAATATGGTTAGTGATGAGGAAACCGGATTGGTTACTTTATGTGAACCTAAAATTGTAGTTGAATTGAGTAGATGGAATGCTATCACTTGTGATGATTGTTATCTTAGAGGCAGAAACTGTGA