Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23450 LG5 65478894 65480556 PREDICTED: transcription factor MUTE-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   guard cell differentiation, positive regulation of transcription, DNA-templated, stomatal complex development, guard cell differentiation, guard cell differentiation, positive regulation of transcription, DNA-templated, epidermal cell differentiation, positive regulation of transcription, DNA-templated, guard cell differentiation, stomatal complex development, epidermal cell differentiation, stomatal complex development, stomatal complex development, positive regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   protein dimerization activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
T/A 65479004 intron_variant
G/T 65479117 intron_variant
A/G 65479270 synonymous_variant p.Glu57Glu
A/T 65479306 synonymous_variant p.Pro69Pro
A/T 65479444 synonymous_variant p.Ser115Ser
G/A 65479499 missense_variant p.Val134Ile
T/A 65479680 intron_variant
G/A 65479920 intron_variant
G/A 65480040 intron_variant
G/A 65480041 intron_variant
T/C 65480087 intron_variant
G/A 65480132 intron_variant
T/A 65480184 intron_variant
A/G 65480193 intron_variant
A/T 65480304 intron_variant
C/T 65480315 intron_variant
G/T 65480480 missense_variant p.Gly167Val
G/A 65480490 synonymous_variant p.Leu170Leu
C/A 65480532 stop_gained p.Cys184*
T/G 65480533 missense_variant p.Ser185Ala
A/T 65480542 missense_variant p.Ile188Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23450.1
MSHIAVERNRRRQMNEHLKVLRSLTPCFYIKRGDQASIIGGVIEFIKELHQVLQALESQKRRKSLSPSPGPSPRTLQPNFHQLDSSSIIGPNSFKELGASCNSSVADVEVKISGSNVILKVISQRIPGQVARIVTVLESLSFEVLHLNISSMEETVLYQFVVKIELGCQLSLEELAMEVQQSFCSEAITML*


CDS Sequence:
>Vu_23450.1
ATGTCTCACATAGCTGTCGAGAGGAACCGAAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGATCGTTGACTCCTTGTTTCTATATCAAAAGGGGAGATCAAGCATCTATAATAGGCGGTGTCATAGAATTCATCAAGGAGTTACACCAAGTTCTTCAGGCTTTGGAATCCCAGAAAAGAAGAAAGAGTTTAAGCCCTAGCCCAGGTCCGAGTCCACGAACACTTCAGCCAAATTTTCATCAACTTGATAGCTCCTCCATAATTGGGCCCAATTCTTTCAAGGAACTGGGAGCAAGCTGCAACTCTTCTGTTGCGGACGTTGAAGTGAAAATCTCTGGTTCAAATGTGATCTTGAAAGTGATCTCCCAAAGAATTCCGGGTCAAGTTGCAAGGATCGTAACTGTTTTGGAAAGTCTTTCCTTTGAAGTTCTTCATCTGAACATCAGCAGCATGGAGGAGACTGTCCTTTACCAGTTTGTGGTCAAGATAGAACTGGGATGTCAACTGAGTCTGGAGGAACTGGCAATGGAAGTGCAACAAAGCTTCTGCTCAGAAGCTATAACTATGCTGTGA


Promoter Sequence:
>Vu_23450::LG5:65476894-65478894(+)
TCTTGTATAAAACTAAGATATCTTTTCATTAAGAAAAAACTTAAAATATTAATTTAAGTCTAGTGTAGAAAACTCAACAAATACAAAATTTAAATCTATTTAAATTTTAATAGATGTAAAACTAAAATTGAAGTCTCTTGTGAGATTAACAACAGAGTTAAAATATATACTTTTATTTAAAAAATGTCACCGCATATTTATTAAGTTGATTGTTATAGAAACAAACTTAAACTAAGAATTTTAACATGTGGTAAGTAACTTGAAACATGTAATTTGTAGGTATTATAAGCTGAAAAATTAATTTGTTTCTCTGTTCGTTGTGATGATAAAGTAGGAGAGAAGTCTGCTTCATCTTTTATTTTCTTTTTCTGGAGATAAATAATTAGGCAAGTTGTATTTTTAATTTTGTCATTATATGTCATGGCTTTTGTTTTGTTAATGTTTGAAAGTTTAATGGACTGCATCCTGTAAGCGCAGATGTAAGGAATTAATTATCTGCTGCTACATGACTACCTAGTGGAGTACCCCAAGTCTTTGTTTAATATAAGTTTTAGACACAAAACGAACCTTTCTTGCAACATTATGCAGAAAATCGGGAAAATTATTCTTAACATAATCAATTATGTTATACTTAAACCTAACTATGACGAATAAAATATTATGACTTATGTGATCTCATAATTAATCATGTAACTATCACAATCACCTGTACATATTATAATGTTGAATACAAGAGATAATATTAATAATAATGAATAATATTATAATAACAAAATTCATTCATTTCTTTCTCATCAAACAGTTTTTATTTTAACTATTATTTTTCATTTTTTGTTTGTTTTCCCTCTACCAAACGAAGTAGTGCAGACAATTAATTGTTGCCACATATGTCCATATTATAAGAAAATAAAATGAAAGTCCGTTGTAGTATTTACTGATGAGTAATTTATTCCTTAGGAATATTAAATTATAATAATATCCTTAAAATTATATATATTTATAATATTGTCGATTATGTTTTAATTTAAAAAACATAGGGTTAAGAATAATTTTACTTTCATTCTCATTATTTACTTTTTTAAAATTTAATGATTTATATTTAAATGTTAAATTAAAAAAATAAATATAAAGATGAAAAATAACAGGAATTAGCCAAGGACTTTCGTAATTATTTTAACATTTTTTTTTATCAAAAAGTATTTCTCAACTCTATGAAATATATACTTTCAATCACGACTTATTTGTAAGCCGGTTATAAATTCAAAGTTTTTGTTAAATAATTCAAACATTGAGCTATTTGAATCTAGGAATTTAGGCTATTCGTATTCCTAAACCATATTATATGCGTTCTACGACCCGTTATTAATAACTTGCATGAAATATATAACCAACTAATTAATTATAAGATTCTGAAACTTTAGTATTTTAAGTGAAAAAAATGTTGTGATCTATAAGTATTTTAAGTGTATATAAACATTATTTTCCTTTTTGTTGGAGTTTTGGAGAGGTGGAGTTGGAATTCCGAGAAGAAAATAAAAGGGATATTGAAAGGAAAAAAGGGTTAAAAAGGTGTGAAGCAGATAAATTTGGTACAGCGAAGAAAACAATGTTTGGGAATAAATTGCATGTTTGCAAGACGATACTAAGTTGAGCGATGAAAGCCTCGGCAAGGCATGCATGAATGGGGGAAAGGAAAGAGATAAAAATGCAAGGGAGAGCTGAGAAAATAACCATGTCCCTGTTTTAACTCACGAGGGCACGTAATTGACGCAAGATCATAAGCGTGAGACGCGTAATGTTTATAAGCAAGGAAAGACAGAGAAAGAGTGTATCTATTTCTAAACTACGTTAAAGAATACTTCACGAGAAAGCAACCTATACCATTTATTACCTTCACTCTTACTCTTAAATTCCCTCCTATAAATACACCACACTTTGACTTCTGTAGTTGAAACATCTAACTACCAAAAAACCAAGACACACCTCAACCATAGTTATCA


Gene Sequence:
>Vu_23450(+)
ATGTCTCACATAGCTGTCGAGAGGAACCGAAGAAGACAGATGAATGAACATCTCAAAGTTTTAAGATCGTTGACTCCTTGTTTCTATATCAAAAGGGTATTTTTCTTTTCTTTTTCCTCTTCCTAATCTTTCTGTGTATGTGATCGGCTTTTGAGTTACCATACCAGAGAAATTATGAATAATTTTTAACAAACTCATCATCAAAATTTTGTGATGTCAATGAGGGAAAGACAATTTCCCATGTTGCTAATTGATTGATTTTTGGAAGTGAGTTTCTTTTCGTGTTTTTGCTTTTATTTTAGGGAGATCAAGCATCTATAATAGGCGGTGTCATAGAATTCATCAAGGAGTTACACCAAGTTCTTCAGGCTTTGGAATCCCAGAAAAGAAGAAAGAGTTTAAGCCCTAGCCCAGGTCCGAGTCCACGAACACTTCAGCCAAATTTTCATCAACTTGATAGCTCCTCCATAATTGGGCCCAATTCTTTCAAGGAACTGGGAGCAAGCTGCAACTCTTCTGTTGCGGACGTTGAAGTGAAAATCTCTGGTTCAAATGTGATCTTGAAAGTGATCTCCCAAAGAATTCCGGGTCAAGTTGCAAGGATCGTAACTGTTTTGGAAAGTCTTTCCTTTGAAGTTCTTCATCTGAACATCAGCAGCATGGAGGAGACTGTCCTTTACCAGTTTGTGGTCAAGGTGAAACAATAACTATTAATTCCTGTCATAATTCTTTTATAACTTCGTATTTAACAATAATATATATCAGTTAACAATAACTATAAATAGTTAGATACAATAATATATATTAGTTAACACTAACTATATATTCATAAATACACTTATAAGAATAATCAAGAAAAGTAACAGTGAGATTCCCAAATGTTGGGAGATTTTATCATTGATCGTAACAATCGGAATTCATAGCCTACTTCAATTAGGGTTTCAAGCCATTTCTATGAACCAAACACATAGCTTTCTGAGAAATCAATGTAGATTTTACAACTTTTCGATATCTAAACCACAATACGCAAATTACAACTCAAAAGGACGTAAAAAAATGTTATTAGACCGAAGGTAACACTTCTTGATTTTGATCAAATAGCCATGACGCATTTTACTAATGCGATCTCGCTTCTAAAATTTATCAGGGAACATACAAGTCTGACAAATATTCTATACGCTTACCGAAAAATTTAGTTATCGTTTTTCTCTCACTTTTGTTCATCACCTTCCTGATGTGTTTTTAATACAATTTTCATGCAATCTAGCTTGTAGATTCCTCTATAGAAAATTTAACTGTAGCACTTTGTCCAATATTTATGTTAATTTCCGAACTGAAATTCAATTTAAATAGCACAAGAGCGTGTCGCCATTGAGATGAAAACAAACAATAAACACCACAATCAGTGTCACAACAATATCCGTAAATTTGGATGAGGGTGATCGTACATATTCAAGTAAACCTAAAAAGATAGAGTTGCAATCACAAATAAAATACTTATATGGATTTTATTTACAGCTTCTTTCTTTATGTTGTCATTACATTGTTTACGTGATACGTTTTTTTACTACTGCAGATAGAACTGGGATGTCAACTGAGTCTGGAGGAACTGGCAATGGAAGTGCAACAAAGCTTCTGCTCAGAAGCTATAACTATGCTGTGA