Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_23676 LG5 67636800 67638446 PREDICTED: dof zinc finger protein DOF1.5-like isoform X2
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Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, seed coat development, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, seed coat development, seed coat development, seed coat development, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/T 67636944 missense_variant p.Glu26Asp
T/C 67637130 synonymous_variant p.Gly88Gly
G/A 67637154 synonymous_variant p.Pro96Pro
A/G 67637585 intron_variant
G/A 67637587 intron_variant
T/G 67637605 intron_variant
T/A 67638007 intron_variant
A/G 67638014 splice_region_variant&intron_variant
G/A 67638069 3_prime_UTR_variant
T/G 67638208 3_prime_UTR_variant
A/T 67638356 3_prime_UTR_variant
C/T 67638441 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_23676.1
MAEESQGIKLFGAMIRLNSEEVKKGEKGREYKREEKRTEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKSCQRYWTAGGALRNVAVGAGRRKGKPPCHGAAEFPDGAVYESSEDENKFEIGSRLVSEEVHNDFRQIFPAAKRRRTPSGEHEGQ*


CDS Sequence:
>Vu_23676.1
ATGGCTGAGGAATCTCAAGGGATTAAGCTCTTTGGCGCAATGATTAGACTCAACAGTGAGGAGGTCAAGAAGGGAGAAAAAGGAAGGGAATACAAGAGGGAGGAGAAGAGAACAGAGAAGATAATACCGTGTCCTAGATGCAAGAGCATGGAAACTAAATTCTGCTACTTCAATAACTACAACGTTAATCAGCCAAGGCATTTTTGTAAGAGCTGCCAGAGGTATTGGACTGCTGGTGGGGCCCTCCGCAACGTCGCTGTCGGTGCCGGCCGTCGGAAGGGCAAGCCGCCGTGTCATGGTGCCGCTGAGTTCCCCGATGGGGCTGTCTATGAAAGTTCGGAAGACGAGAACAAATTTGAGATTGGAAGTAGGTTGGTTTCAGAAGAGGTTCACAATGATTTTCGGCAAATTTTCCCGGCGGCCAAGCGGCGGAGGACTCCATCAGGTGAGCATGAAGGTCAATAA


Promoter Sequence:
>Vu_23676::LG5:67634800-67636800(+)
CCATTTCAATATAGTTAAAAGGATGCACTATCTCTATTGTTTGAAAAATATGAAGAATTTTAATTGACCTAACAGATAAAAGTGGTTTCAACTTTTAAGAAAGGCAGGAAAATCGTATGAGATATGCAATGCTGGATTCTCACGTCAATTCCTACAGATTTCATATTAATCACTATCGTATCTTTAACCCGATTGCGATCAATTATCTCTATTTTTACTTGATTTAAACATTTGAAAAATAATTTATTTTTATACGAATTTAAAATCTCGATTTGATTACTACTTAATATTATATTAGAGAATATCAACCTTTTATGAATTGAAGTGGGATTGTTTTAGTTTAATCCCTAATTTCAAATTTAGTATTAATATGCAGTCAGGGTCAATGTCAGTCTGAATGATAATAGCTAATCCTAATCTATTGTACTGCAAAAAAAATTATTATAAAATATAAATTAAGGTATACTTTACAACATACCTTTCAAAATAATTAATAATATATATATGTCATTAGCCTAAATTGAAACATATTGAAATAACTTGATCGTTTTTTCAAAATACATTGATCTAAATTATAAAGCTAAACAAAGAAAAATTAACACCGGGTCGAGTCAAATTAATAGAACAGTAGAATCATGCAGTTACTTAAATTCGTACTATTTTTGTCTATTTTTTCCCGATAATTATTTCCCTCCATTTTAGTTTTATATAGATGATGTTGAAAATCAGTTTTTGGCTGAATACATTTTTGCCTAATTTTTTGAAAATTTTGTTTTCTCTCCTCTCCTTCAATTCATTATTCTTCAACCAAATAGTATGTGAAACAAAATGGATAATAAACACGATGTCGTATTGGTCTGTCTCATAACCCTAAGGGAAATATTGGCATTGACACTAAGGTTTAGAAGATTAAGTGAAAATCAGTTATTACTAAGATTAGAATAGGGTGATGGAGCAAGGAGAACCAACCAACCGAAATGTCACATCCAGATGGCATATCTAAGTATCTTAATTATGTAAACAAAGAAAAATTTTGTGTATTAGTTTTAAGAACATGGTGTTGATTAGCAATATCCTTTTCCAGCAAACATCCATTTGTTCAAAGCTTCACCTAGACATTTCCTTTTGGAACTTTTCTACATACATGTGGCACTGTACGCAAATAGTAGAATGGTACCATTGCATTAAACCATTGATGTCTAAAAGCAAACTTAATATTGGACATGCCTTTATAATCTTGTTCTTGAATTATTTTAGGAAAACTAATAGGAAAGAGAAAAGGCAATACTTTTCAGCTAGTAAGATCTTTGAGCTACCTTACTTTTTGAAATAGAATACTTGAAGAATTTCGCTACAACAAGTTTCTTATTTCTTTCACACACACATATATATATATTATTATGCAAGTACATGCATCCCCTTTCCACTGCCTTTTGACACTTTGCAAGCGATCTATCTGGACTGGCCCCACCTTGTAGACATTTTAGCACTGCATGATCATAACGTAGACTAACTCCAGGGGATAAATAAAAAACACTTTTCGAGTTAAGTAATTATGTTCAAAGGAGAAACTAAGATGTATTTTCTTACCTAAAAATACTTTGACCTCCACACCTTCTTTTTCAGTTAAATATACAATTCTCAACAGATGTGGTAATTAAGTCTATTACGCAATAATAATTTTATTTACTTATAGCAGTTGAGCTTATTTGTTTATTTATTTATTTATTTATAGAAGCAACTGTTTCACCCTCTCTTATGTCACATTAACTTGGGAAGAAAATAAAGATAGTGCTAAGCTTTCTGCTGCATAGTACCCTTCTCTTTTCTCTTTAGTTGTTCTTCTGACAAAGAACTTTACACCCCACCTAAGTTTAGTTTTTGGCGCGTACCACGTGGATTTCATGCCCTGGTTTTATGATTGTACTAACTAACAAACACTTTTCGCTTTATATATCACCCTAAGCATATATATAAAAGCACTTACATAATAATTCTTC


Gene Sequence:
>Vu_23676(+)
CCCTCAGCGACAACAAAAACCTTCTCGGTTAAGAAAGAAAAACTCTCTCTCTTTCTCTCTGTTAGAAATGGCTGAGGAATCTCAAGGGATTAAGCTCTTTGGCGCAATGATTAGACTCAACAGTGAGGAGGTCAAGAAGGGAGAAAAAGGAAGGGAATACAAGAGGGAGGAGAAGAGAACAGAGAAGATAATACCGTGTCCTAGATGCAAGAGCATGGAAACTAAATTCTGCTACTTCAATAACTACAACGTTAATCAGCCAAGGCATTTTTGTAAGAGCTGCCAGAGGTATTGGACTGCTGGTGGGGCCCTCCGCAACGTCGCTGTCGGTGCCGGCCGTCGGAAGGGCAAGCCGCCGTGTCATGGTGCCGCTGAGTTCCCCGATGGGGCTGTCTATGAAAGTTCGGAAGACGAGAACAAATTTGAGATTGGAAGTAGGTTGGTTTCAGAAGAGGTTCACAATGATTTTCGGCAAATTTTCCCGGCGGCCAAGCGGCGGAGGACTCCATCAGGTGGGTGCTTATCTGTCTCATGCTCTTCTTATCTTATCTGTACTTTTTCTCCGGCGGCCAAGCGGCGGAAGATTCTTATGCATTCCTGTACATGAATTTAGAAAATATGTAAATTAGTTTTTTCACTCTAAAATTCATCATATTTTCCATGTTAAAAATAATTAAACATACACAGTTGGAAATTAAATATATAAATTCAACAAGTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTTTTTTTTCACCATATTTGGTAAAAAATTACAAAGATTAAAAAAATATTTTTATTTATTTATTTATTTCATAAGGGTGAAATAAGCTGTTGGATATGTATAATAATTATTTTTTTCTTTTATCTCATATAGATAAAACTTGGAGAAGTAATCATATTCAGAGATCCAATGGGTATAAACAATGGCATCGATTTTTTTTTTAGCATAGTTTTTCTTTCATTTCTTTCTCTACTTCTGGCATATGTACATCACTATCCAGTTCAAATAGTAAAATTAGTGAAACTTTATTGGTTTACCCTATTCACATATTAGGAATGTGACTAATTATAAGATTATTATTATTTTTTTCATTTTGTCCATTAAAATGTGTTTCGAACGGTCCAAAATATTGTAAAGGAAGTGTTTGTTTGTACAGGTGAGCATGAAGGTCAATAAAATCATCTACGAATTGAAAGCACAGAACATGGTGGACTTATATAGGAACAAGAAGAAGAATTCAAAAACTACGGAGAAAAGCGTGTCGTGAAGATGTGAACACCTCAAAAATATTCCATGACATTAAATCAATGGATGATGCTAAGCTACGTGACACATTCACATTAGTTTTTTCCTCTATGCTAAACTCCATTGTCCATATCTACGAAGGTTTTATCTTTTAAGCCATCAATGTACTTCACATAATTGGCTGAGTGGGTTTCACACTATCTTTGACACCATTTCCATCCACGAAATTCATGTATATATTCATATGATATTCTTGAAATATTGCTCACTGGACAAAGAGATAGGATTGAAAAGGTTTACATCAAGAAAAGTATTATATATATTATATATTTTTCAGTGC