Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24084 LG5 70940433 70945634 PREDICTED: shaggy-related protein kinase kappa
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, protein phosphorylation, signal transduction
Cellular Component   is active in   cytoplasm
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus, nucleus, nucleus, nucleus, nucleus, mitochondrion, nucleus
Molecular Function   enables   protein serine/threonine kinase activity, ATP binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, ATP binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity
Pathway   B 09132 Signal transduction   C 04012 ErbB signaling pathway [PATH:ko04012]
SNP Position Effect Amino acid change
T/C 70941089 upstream_gene_variant
A/T 70941317 upstream_gene_variant
A/T 70941322 upstream_gene_variant
T/C 70941540 upstream_gene_variant
T/G 70941796 upstream_gene_variant
T/A 70941799 upstream_gene_variant
C/G 70941827 upstream_gene_variant
T/A 70941924 upstream_gene_variant
T/G 70942112 upstream_gene_variant
G/A 70942426 upstream_gene_variant
G/T 70942893 splice_region_variant&intron_variant
A/C 70942898 intron_variant
C/G 70942912 intron_variant
G/T 70942918 intron_variant
A/G 70942978 intron_variant
T/C 70944399 intron_variant
A/G 70944497 intron_variant
T/A 70944882 splice_region_variant&intron_variant
G/A 70944955 intron_variant
G/A 70945217 missense_variant p.Ala59Val
C/G 70945252 splice_acceptor_variant&intron_variant
G/A 70945254 splice_region_variant&intron_variant
T/A 70945257 splice_region_variant&intron_variant
G/A 70945269 intron_variant
C/G 70945307 intron_variant
A/C 70945348 intron_variant
T/A 70945374 intron_variant
A/C 70945390 intron_variant
C/G 70945407 intron_variant
A/C 70945425 intron_variant
G/A 70945432 intron_variant
A/T 70945475 intron_variant
G/A 70945484 intron_variant
A/T 70945487 splice_region_variant&intron_variant
C/T 70945489 splice_region_variant&intron_variant
C/T 70945493 splice_donor_variant&intron_variant
C/G 70945494 missense_variant&splice_region_variant p.Arg47Ser
C/T 70945495 missense_variant&splice_region_variant p.Arg47Lys
C/T 70945537 missense_variant p.Arg33Lys
G/A 70945551 synonymous_variant p.Val28Val
G/A 70945555 missense_variant p.Ser27Phe
T/A 70945571 missense_variant p.Arg22Trp

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24084.1
MASASLGTGGVGSSRSVNAAFRGSSSSVDWLGREMLEMRLRDHDEDRDSEPDIIDGVGAETGHVIRTSIGGRNGQSKQNVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALRHCFFSTTDKEEVYLNLVLEYVPETVNRIARSYSRINQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKSQELSGIPPDVINLLIPEHARKQNLFMALHT*


CDS Sequence:
>Vu_24084.1
ATGGCCTCCGCTAGCCTCGGAACTGGTGGGGTCGGCAGTTCCAGGTCCGTTAACGCTGCCTTCAGGGGTTCTTCCAGTTCCGTCGATTGGCTTGGCAGAGAGATGCTCGAGATGAGATTGAGAGACCACGACGAAGACAGGGATAGTGAGCCTGACATCATCGATGGTGTGGGTGCTGAGACCGGGCACGTGATAAGAACCAGTATCGGTGGCCGAAATGGTCAATCTAAGCAGAATGTCAGTTATATTGCAGAACACGTGGTTGGAACAGGCTCTTTTGGTGTTGTTTTTCAGGCAAAATGTAGAGAAACGGGAGAGATTGTAGCCATCAAGAAGGTTCTCCAGGACAAGCGCTACAAGAATAGAGAGTTACAGATTATGCAAATGCTGGATCATCCAAATATTGTTGCCCTACGACATTGTTTCTTCTCAACAACTGACAAAGAAGAAGTTTACTTGAATCTTGTCCTTGAATATGTTCCTGAAACCGTGAATCGTATCGCAAGGAGCTACAGCAGGATTAACCAGCGAATGCCTTTGATATATGTAAAGCTCTATACCTACCAGATTTGCAGGGCACTTGCTTATATACATAACTGCATTGGTATATGTCACCGTGACATCAAACCTCAGAACCTACTTGTGAATCCGCATACTCATCAGCTGAAACTATGTGATTTTGGTAGTGCAAAAGTGTTGGTAAAAGGAGAACCAAACGTTTCTTACATCTGTTCAAGATACTACCGTGCTCCGGAACTTATATTTGGGGCCACCGAATATACAACTGCCATAGACATATGGTCTACTGGTTGCGTAATGGCTGAATTACTCCTTGGACAGCCATTGTTTCCTGGAGAGAGTGGAGTTGATCAGCTAGTTGAAATCATCAAGGTTTTGGGAACTCCAACTAGGGAGGAGATAAAGTGCATGAACCCTAATTATACTGAGTTTAAGTTTCCACAGATAAAACCTCATCCATGGCACAAGGTCTTTCAGAAACGTTTACCCCCAGAAGCAGTGGATCTTGTCTGTAGGTTCTTTCAGTACTCTCCCAATTTGAGATGCACTGCGTTGGAGGCTTGCATTCATCCCTTTTTTGATGAATTGAGGGACCCGAACACCCGTCTTCCTAATGGTCGACCACTTCCTCCACTTTTCAATTTTAAATCTCAGGAACTTTCTGGCATACCCCCTGATGTCATCAATCTTCTTATTCCAGAGCATGCGCGTAAACAGAACTTATTTATGGCTTTGCACACTTAG


Promoter Sequence:
>Vu_24084::LG5:70945634-70947634(-)
AAATAATGATTAAAAAATGCTCTCAAATTAAACTTAATTGATAAAAAAAAGTTGTTCATGGAAAAAATATTCCAATGTTTTAAAACTGATTTAATTTCCTACATTTCCAATCATTGTAAAGTTAAGATTTTATTGCTCATTTGGTATTTAATTTCTTAGAAATGGTTCGTTATTATTTTTTGTTTAGTACATATTTCTTTTATTATAAATAAAGTATCATGTGTGTATATTTTTTCTATTATATTTAACATAAGAGTATGATTTTACTATATTCAACATGGTATATAAAGTCTAAGGATATTTTAAGATTTTTTTCTGTCGCCTCTGCCACTGCACTTGTTGATACTCGTGGTGGCGGTGTCTATCACCGCTGTCGACGATACCACAATCAATCTATATTGTTAAGGGCACTGCAGTCTACCGTCGATGTCAGCAACGATGACATCTATCGAACGAGGTCGCTATCTGTTGTCGTCACCGTGTGTTTGAGTACCTCAATTATACTTTCTAAATTTCAATTCTTTATGTTTTGTCCAACGTCGTTTCTTGTTAAGGAGTATGTTTCTATGTCTGTTGATGAATAAATGAGACATTCTTTTGAAGAGCCAAATATTTCATCTTCGCGGTTTGTCTTCAATGTTTCACTTTTTGTCATCAATGCATTGTTATTTTCACCGTTTACCATGAGGGAAAGTATGTTTTTATGTGATCCAATGTAGTTCCTGAAGTCTATCGCTATTCGTCACAACAGGTCTCATTCATTACCGATGACAATCTAGTCCCTATAATTTATTATTGTTCACCACTAGAAGCCTGTATCAATTGTTGATAATAACTTAATCTGTCGTAAATTATCGTTTTCAAATAATGATAAAACAATATTGGTTGTCATCTGTTATGATAATAGTATCTTTTGTCAAAGTCATATTAGTTAAAATTTCACTATTATCCACTATAATCAAAATTATCTTTATCTTTCATTTCTATTTTTTATATTTTTTATTATTATTATAAATAGAGTAACCTACCTTTATATTTAAACGGATCCTAGTATGATACATAATTTTTGTTATATTGAACAAATTCGATACTAAAATTATTTATTTAAATTAAAAAATAAACTATTTTTATTGGATAACAATACTTTTATAATATTTTATTAACAACATTTTAATAATATATACTTATCATTCATTGGTCCAAAATTACAACACAATTAATAATAATAATCATAAACTCTAACGTAGACCGATCACATAATAACACGTAAATAATATTAAAATATTGTCAAAATAATGTTATTAAAGTATTATTATCCATTTTTCTTAACCATCTCAATTTTGATAAAACATTCTTGATCTGTTTTAAGAAATTTAATGAAAATAAACCATTGTATTAATTTTCTACAAAAAAACTAAATTGTATCACTGTACACAAATTTTGATTAAAAATAAAAAAAAATTGGAGAATCAATTTAATATTTTTAGACTAGACGAAATAAGTAATTAAACGTAAAATCAACTGGTGTTGATTGATGAAATTAATGTTAGGATGAAGGGTAAAAACCATTAATTATAAATGTGATGTGAGTTAAGATTAAAAAAGGTATAATTATGTGAGTAAACAAAGTATTGGAATAGGGAGGATGAAAAAAAGAAAAAAAGAAGAAGAAAGAATTGAAATGGTAAAGTGGGTACAGGGAAGGTTGAAGAAGGAGGAATAATTGGTATTATTGTATAGATGTAAAGGGAAAAGGTGGAATGGAATAAATAAGAAGAGAGAATGGAAGTGAAGAAGAAGAAGAGATGAGAATGGTTGAAAGTGAGAGAGAGTAAGATGCAATTCCACTGCTTTCATTCTCACCACAAACTGACACTTCCACTTCAACAAGGTCACTCTCACATCTTCTTTACCATTATCTTTTTTCCTCTCTCCTCTCTCCATCCATCTCTCTTCCCTTTTCCCTTTCCGATTAGATCTGATCCAACTCTTCCTCATCA


Gene Sequence:
>Vu_24084(-)
ATGGCCTCCGCTAGCCTCGGAACTGGTGGGGTCGGCAGTTCCAGGTCCGTTAACGCTGCCTTCAGGGGTTCTTCCAGTTCCGTCGATTGGCTTGGCAGAGAGATGCTCGAGATGAGATTGAGAGACCACGACGAAGACAGGGTCTGTTCACTGTTACCCTTTTTCATCTTTTTTTTTTCATTTTTTTTTAATTCAAGAAGCACCATCTCTCAATTCATCTTTTTCCTGTTCCATTCTCTTCTTCTTTAACCACTATCAAAAGTGCTCGGGACACAAACACAAGTTTTGAAACCACCTTCTCCCGAAATTTTAATTTTTTTTCCTACCGTTTTTGTTGTTTCTGTTTCAGTAGGTTTCAATTGCCCCTGGTTTATATTATGCAGGATAGTGAGCCTGACATCATCGATGGTGTGGGTGCTGAGACCGGGCACGTGATAAGAACCAGTATCGGTGGCCGAAATGGTCAATCTAAGCAGGTAAAAAAATAAATTACGGGTCATTTGGTGTTTGAGAATTCTCGAGGTTCTGGAATCATGGTTGAACTGTTGACAACTGGCGAGTTCTTTCTGACAAGTTCTTTGTTTGAGTTGACAGAATGTCAGTTATATTGCAGAACACGTGGTTGGAACAGGCTCTTTTGGTGTTGTTTTTCAGGCGAGACATACCAACATAGTTTGGTCTTGATATCTTTTGTGAACCTGTGCTGTCCACGTATGACATTCTGATACCTTTTTCATTTTATCAATGCTTTTATCAGGCAAAATGTAGAGAAACGGGAGAGATTGTAGCCATCAAGAAGGTTCTCCAGGACAAGCGCTACAAGAATAGAGAGTTACAGATTATGCAAATGCTGGATCATCCAAATATTGTTGCCCTACGACATTGTTTCTTCTCAACAACTGACAAAGAAGAAGTTTACTTGAATCTTGTCCTTGAATATGTTCCTGAAACCGTGAATCGTATCGCAAGGAGCTACAGCAGGATTAACCAGCGAATGCCTTTGATATATGTAAAGCTCTATACCTACCAGGTATGTGATTGCTTGCTTCCTGTTAGATCTGGAAATGAAAAACTGGAAACTCATATAATAATAGCAAGAGGCAATCCCCAGGGTATTTCGATTATAAACATCGTACATGTGTTAAATGTTAATAGTCTCATCATATTAATAGCTCATGAAGTTCTAACTCGCCCCTTTGGTTGTTTTTCTTAAACTTTCATGTTAAAGTTCCCCAACTTTAGCTATGTGTGATGTGAATATTTTGAGTTCCAGTTTGACCTATGGATTTCTTTTTCAAAGGAATTGTTAAAAAAGGAAAAAATAGTGGATATTGCTTTTTGTGCATGAGAAACAGACTTGCAGAACGAAAGTGAGGGATCGTGTCATTTACACATTCTAAATCCTTATTCCTTTCTTGCCCATTTATATCTTTATTTCTTCTTTTCTCTGGTTTTGTCTGCAGATTTGCAGGGCACTTGCTTATATACATAACTGCATTGGTATATGTCACCGTGACATCAAACCTCAGAACCTACTTGTAAGATAATTCTGAGTTACGGATTATTTGTTGTGTGGAACTTATTTTGTATACAGTATTTCTCTCATTTCTATGATATTATTTATTTTTAGCATTCTTATATCTGATATAAATCTACACTGAAAAAGGAAGTAGGAAGCACTAGTGAACTCCAATTAATATTTTGTGATCAACAACAATCAAGTCTTTTTCCCTTTAGGTATGGTTGACCACATGAACCAAGTGATGTCATTATGTTCTATCATAAATCATATACAAAAACAAAACATTGAACTCTAAATCCTTTTTAATGGTTTCAACTATAGCTTTTCTCAATCTCCCTTTGTCTAACACATTAACGATTGAATTGCCTTTTATCCAGCAGTATACTCTCCCAACTAGGGCTTCTACATGTCTTCTCCACACATGTTTACGCATCCCTCTTTCAATTAGTATGTTATGTTCTCAAGCAAATAATCACTCGGCTTATTCTGTTCATTTTAATTTTATTATTCTTGAAATGCATGCCTGACTGCTTGGTCCCACATCCTCCCACGTCTCTGCATGTGCGAATAAAGGTGATTCTATATTGTTAAATGTAGTCTGCTTTAATCAGTTGATGATGTCTGAATTTTCCTTTAATTTGCATTGAAGTTGATGGTTTTGTGAATGCTGGTCGTACTTTATAATTGTGTGGAAGCGCAGTCTTCATATTACTAATAACATGTCCTAACCAATTGGTCAAAGAAATTCAGTACCATGTTATGTCCAACCTCCTAAAGCTCGAGCTATTAAGTTAGAGAGGCACAAGCTTGATTTTGCTAATAACATGTCCTAATCACTTAGTCAAAGAGATTCAGTACCATGTTCTGGTCCAACTTCCTAAAAGCTTGAGCTATTAAGTTAGAGAGGTTGAAGCTGCACGGCAACAATGGCTTTATTTTACCAACACTGTGTTAAATCTTTATGCGAAAGTCTTGTTTCATTGTTTTTCGGTTAGAATCATGTAGTAGTGATTATTTGGATTGTCAGACTTTAACTTTTTGTTAAAAAAAAATTAATATCTAGATCTTTTGGAATAAATTCTTATATAATGTGAAAGATAAGTGAAGCTTTTATAACCATTTAAGACTATGGCTTAGCAGCCTACCTGAAAGATTATAGAGTTTGTAGCAAATATACTTGTATGCCATCTGTTACTATTTGTTTGACTCAAATGTATGTCATGTCAGGTGAATCCGCATACTCATCAGCTGAAACTATGTGATTTTGGTAGTGCAAAAGTGTTGGTAAGATATTGATTTAAGTGCACTGTTGGTTGATGGAAGCTACTGTTTTTTGTTCTTGAGTTTCATCCATATTCTTCTAATACATCCAGGTAAAAGGAGAACCAAACGTTTCTTACATCTGTTCAAGATACTACCGTGCTCCGGAACTTATATTTGGGGCCACCGAATATACAACTGCCATAGACATATGGTCTACTGGTTGCGTAATGGCTGAATTACTCCTTGGACAGGTAATGTAGTTCTTGAAAAATTGTGGCTACATTTTTCTCATTTCATCATTTATCTGTTTCATTGTGTTTTTCCTGAAGTTCAAGTTGGTTTGCAGCCATTGTTTCCTGGAGAGAGTGGAGTTGATCAGCTAGTTGAAATCATCAAGGTAAGAATTTACCTTATGGTTTTCAACTAATCTGGATTTTGCTATCCTAGATTGTGAATATATTTTTTAGATGTTATATGCACAATATATTCAGTTTGGTCCACCAGAAACGGTATATGTCCTGAGGATTTCTACATTTTCTCTGCATCCTGGCTCAAGGAAAGGAATGTATTTATTTTCTTTAGAGCAACGATTGCAGTCTTAAATGTACAAATATTCTGCTACGCTTGATCTTCTTGTCTTGGTTTGAGAGAAATATACAAAACAAAAAGTAAATTTTCCTTTACTTGTACATTTTTGTAATTGAAAGTTCTCAAGTTCTTTCATTGTTCTGGTATAAAGTTTTATCGTTCACTATTCTCACAATAGAGTCATGAACAATTACATTTAATTGTTTCTATTTCAGGTTTTGGGAACTCCAACTAGGGAGGAGATAAAGTGCATGAACCCTAATTATACTGAGTTTAAGTTTCCACAGATAAAACCTCATCCATGGCACAAGGTTCTTTCTCTCATCTTCTTTCTTGCATTCTGTAACTTCCCATGACTGTAGTAATTCAGGATTTAGGTTAATTTCCTTTGCTAATTCATTGCCTAGAACAGTGCATTTTAATCACTGTTGAACGTGTACCATGCTGATACTATGCACGTCAAAAACGATATGTGTGTCGATGTGGTCCATTTGATGGTATTTGCATGCTTTTCCTTGTGGGGACTCTAAGCAACTGGTATAGTTGAGTAATTGAGTTGCTAAAATTACTCTATGGGAGGGTGATGAATTCCACATTACCATCCGGTATTTTGAATATAGTTTATTCCTACAAGTACGATATTTCACAGGGAAAATGGGAACCGAGTGTTTCATATAAACGAGAAGTAGAATCCTTTTGATACTTGTATTATCCCAACACCATTTTTCAAAGTAATAGTATTATGAAAAATCATTATACTGTTGTGCATTTTTTGGGGTGGGGGTTCTTTGTGCAAGTATTTCAATATGATATTATTATAATGTAGCAGAATTTCGTGTTTTTCCCTCACAAGCAGTAGAAACTACATTTTCTTTTAATTTAGTTTTTTTCCCACTTTCTAGTTGTAGTTTAATTGTAGTTGTTGCAGGTTGATATAAATGGTTTTGGTTGTAAGTTTTTGGGCATTAAAAAGAGTTGAATATAGATCAAGGAGTCAGCCTTTTTCTGGGTTTGGTTTGTCTGCCACACTGGATATGCATGAGACTGGATTAGTGCATTAGTACTGATAGTTGTAGGTAGATAGGACCGTACGTCGTCAAAAGTTAAATTGTAATGGGCTACATTTTTAAAACATGGTCCCAGTTTCTCAATGGTTAGCGAGGGATTGAATCAATGTTATATATCAGTTCCTCTAATGTATGACATTGATTAATATTTGTGTGCACGCGTGAAGCTATTTAATTTGAGCATATGCAAAGTATTAGTAAAACGGGTGTGAATGAGAGATTTACAATGATATTATCATGATTCAATAGGTCTTTCAGAAACGTTTACCCCCAGAAGCAGTGGATCTTGTCTGTAGGTTCTTTCAGTACTCTCCCAATTTGAGATGCACTGCGGTAAGTTGAATGTCTGCAATGTTTTTATAATTTACTTTTCTCTGTTGTAAAATTGTTTGACTATTATGATGTTATGGCACTGCTGCAGTTGGAGGCTTGCATTCATCCCTTTTTTGATGAATTGAGGGACCCGAACACCCGTCTTCCTAATGGTCGACCACTTCCTCCACTTTTCAATTTTAAATCTCAGGGTGAGTTTAATTAGCTCCCTCAATCTAATAATGATGTTTCTTTGAATTAGCATAGTATGGGTTTTAGTCTTATGCTTTGGGATCTCGGGGTTACAAAGCAAATTCTGTTATATTATTTTCGTTAATTTTCTGCTTGTTCATTTATGCAGAACTTTCTGGCATACCCCCTGATGTCATCAATCTTCTTATTCCAGAGCATGCGCGTAAACAGAACTTATTTATGGCTTTGCACACTTAG