Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24169 LG6 2900379 2902767 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, DNA-binding transcription factor activity, DNA binding, transcription cis-regulatory region binding, DNA binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding
SNP Position Effect Amino acid change
G/A 2901037 splice_acceptor_variant&intron_variant
G/T 2901407 intron_variant
T/A 2901581 intron_variant
C/G 2901590 intron_variant
G/T 2902205 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24169.1
MANFTPTTSSTTTTVAAAATTTAPSQPSWVDEFLDFSSTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDISAAALPPPPLSSASNPSSPSSDQNSNNEEKPMAMTLDLKPKTEKVEEESSCKNEAAALQFSATTTSPETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMSNTVNNNLQNPSTSQPQATIQSHSLHQHQQQIAVSQPLGCKDKEQLLS*


CDS Sequence:
>Vu_24169.1
ATGGCCAACTTCACACCCACAACCTCATCCACCACCACCACCGTCGCCGCCGCCGCCACCACCACGGCTCCCTCCCAACCCTCATGGGTCGACGAATTCCTTGACTTCTCCTCCACCCGGCGGGGGGCTCACCGGCGATCCGCCAGCGACTCCATTGCCTTCCTCGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGGCTCGACGAGGACCAGCTGATTTCCATGTTCTCTGACGACATTTCAGCAGCGGCACTACCGCCGCCACCGCTTTCATCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGACGTTGGACCTCAAGCCGAAGACGGAAAAGGTTGAAGAGGAGAGCTCGTGCAAGAATGAGGCGGCGGCGCTGCAATTCTCCGCCACTACCACCTCCCCTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCAGCACAGAGATCAAGAGTAAGAAAACTACAATACATCTCTGAGCTTGAAAGGAGCGTAACAACATTACAGACGGAAGTATCAGCATTGTCTCCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAGGCATTGAAGAAGGAAATAGAGAGATTGAGGCAAATCTACCACCAACAGAACCTACAGAAGATGAGTAACACAGTGAACAACAATCTTCAAAACCCATCAACATCACAGCCACAAGCAACTATTCAATCACATTCCCTTCATCAGCATCAGCAGCAGATAGCAGTGTCTCAACCATTGGGATGCAAGGACAAGGAGCAGCTCCTGAGTTGA


Promoter Sequence:
>Vu_24169::LG6:2902767-2904767(-)
CTAATTGAGGAAAACAAAAGTAATTACGATATTTTGTTATCATAAAAATACAAAAATAAAAAATAAAAATTCAATACTTATTTTAAAATGATTAAAATATTAAAAAAACTAATTATTAGTTAATCAATATTTGATTATGCTAATCACTAAAAATAAAATCATGCACGACAACAATTGTATTTATGAGATTAGAATGCTCGGGGAATTATGTTCATTGACCATGGAGAGGACAGCTAAACAGTTGGAGTTCACACATATGAGCGTAGTTATCTCTAGGGAATATGTTAGTAATCACAATGATTAATTTAATAATTTGATGAGGAATCTAAATTTCTTTTTCCTCTTCACGAAGAATTGAATTTGCAAGCATATGGATATGTTTAAAGAAATAATAGAACATCTTGAAAAGTGGGTGATAAATATAAAGACAAAGGTATTAAAAAAATAGGGAAAGTATATATATAAGATGCATTATTGTATGGTTTTGCTCTAATGATTATTAGAGCGTCCTAAGTAGAATGAGTTTAAAAAATGATATACGCAACATTGGTGCCAGCATGAAATGATGGAGGTAGCCAGAATTTGAGAGGAGAAGGAACATAAATCTTGGCATGTGAGTGTGATTTGGGGATATATATAAAGCAAAGAAAGGTGAGTTCTTGCAAAAGGGTTTCACATGGGGGGAGATGGAGGACATGATTCTTACTTACATATATAACACAGTCCTTTTTTCTTCACAGCTCATCCTTAACAAAAGTCCTATAAATCTTCTCAATATACAACTGTGTCATAGTTTAATCTGCACCAAGATCTTCTCCCATGTAACTGCACCATGTTTCAGTGATTAAATAAGGCCACCACTAATCACAGACTTGCCAAATACTCAACTGAAAATGATGAAAACCAGAACCATTTGCATACTCTTTTGATTAATAATATATAAAAAAGGGAAGTATATAGTATCTGATCCAAACCAGAAGCAGAAGCAAAAGGAAAAGGAAAGTACAGATATGGGATGCCAGCCGTATCCAATTAATCCATTAATCGGATCCAAAAATGGTAAGAAAAGAGCTAAAGAGAGATGATTATACATAGAATAATGAATTGAAGGGTTGTGATGGAAGACTGAGCATGTGAAAACCAGGAGGTGAAGCATTGATTGTGGTCCCATTATCATCCGAGTGTAATTAAAGTGCTCTATGGATAGGACACAGCACAAAGAGGAACTGCCAGAGACCCTATAGACCAAGCTTTTTTGGCAGGGTGAAAAATAAAATACTGCTCCAATCCAACCCAAGAACAGGATGAAAATTCTTATAATATGCTATACAGTATCATGACATGAGACAATGGATGCCAAGTGAAGGGGTCACATCTGCACGTGGTTGCTGATTCCTATACTTATTAAACAACACTCCATTTTTCCCACTAAAACCGTTCAGTCTTTCACCACCTAGCTGTTGCTAGCTGTCTCTAATCCCCTCCCATGTGACCCACCTTTCTTCGTCTCCAAAACCCTTGGTGAAACAAACATTGCATTACATTATACCAAAATCTAGGTAGAGGGTAGGAAGAAAAAGGAGAAAGAAAAAACCTTTATGGCAAATGAATGAAAACACCATTATCAAGGCTTTATTACATGCACAATGCCATTGTCTCTCATCATCTCTTTAATCTCTCTTTCTCTCTCTCCCACTGCTTTTAGAAACCCAAGAACAAGATTTTGAAGTAAGATTTTCGGTTGTTTGTGTGTTGGTTAGGTTGTTGGGATCTCTGTTGTTCCTCTTTCTCTCTCTCTCTCTTTCTCTTTCTCTTTCTCTCTCTGTCTATTTTCTCAGACACACGATTAGATACACAAGGCCATTATACGTAGTACACAAATTTCTCGCTATCTCTCTATATTTGGGGTCACACATACATAGGTAATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTTCTCACCAAAGGGTGCCCACA


Gene Sequence:
>Vu_24169(-)
ATGGCCAACTTCACACCCACAACCTCATCCACCACCACCACCGTCGCCGCCGCCGCCACCACCACGGCTCCCTCCCAACCCTCATGGGTCGACGAATTCCTTGACTTCTCCTCCACCCGGCGGGGGGCTCACCGGCGATCCGCCAGCGACTCCATTGCCTTCCTCGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGGCTCGACGAGGACCAGCTGATTTCCATGTTCTCTGACGACATTTCAGCAGCGGCACTACCGCCGCCACCGCTTTCATCGGCGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGAGGAGAAGCCCATGGCAATGACGTTGGACCTCAAGCCGAAGACGGAAAAGGTTGAAGAGGAGAGCTCGTGCAAGAATGAGGCGGCGGCGCTGCAATTCTCCGCCACTACCACCTCCCCTGAAACCGTTGTCGATCCCAAGAGGGTCAAAAGGTTAGGCTAATCACACCAAATATTATAATTATTGCTATTACTACTATTATTTTATTCTTTTATTATTTTATGTTGTCCACCTCCCATGCACGTACAATTAATGAAAATAATTTTATGTTCCAATTAAACTAATAGCTCAGTAGAATTTAGGTTCTATATATAAACTAATAAATTAATAATAGTTTAATTCATATATAATGTCAGTGTAATTTACTGTCTAACTTGTTGCTTTGTATAATTTTTAAAATAATTATTTTAACAGTAATAAATTTATTACTCAAGATGACGATTTATAATTCCGTCATTTGATAGATTATTTATTCTAATTATTTTAATTTCATACGGGTTTGTCGAGTAGAATTTTATTCATAAATTTTACTAAAAAGGCTGTTAAGTTAAAAAAGTTTTGAATTTTCATCAGTTTAAGTATTTGTTTATAATCGTAAAAGAAAAATACTCCTTGATCCATATACCTTTGTCTTGCACATTAAATTTGGTACTTTTTTATTGCTAAATATGAATAATATATATACTTGTTTAGTAGAAAGGTGATTGGCTGTGTGTGCCACATTTTTTGAGAATTATAAATTATACTATCATCAAACCCTTCGCTGCTAAATTTATAGAGTCGAATTAGAATTTGATGGCTACACTTTTAACTGAAATTAATGCATGATACAAAAATTGAAATTTTTGTGTTATTTAACTGTAATTTCATGGAAAACAATTGTTCCAATTATAATAAAGAAAACAAATGTTTGATAGTCATGTATATATATCTGGATATAACATAGTCAATTTTATCGAACCAATTAAATGTGTTAGTTGAGTGCAGAAATTAATTATGTTAGGCCAATAATCTCTTGTACACAGTTTTCCTTTTCAAGCTACTTTAACATAGCATTCTCCTATAGGTGATTCAGCTGTATCTATAAAAATTAAAGGAGTGTAATATAAATATACCAAACTGAATCTAATTTGTAATTATGTATGCATATCAGAATTTTGGCTAACAGGCAATCAGCACAGAGATCAAGAGTAAGAAAACTACAATACATCTCTGAGCTTGAAAGGAGCGTAACAACATTACAGGTAAATATAAAGTTCGATTTAATTTTCATAATAACATATATATATACACACATTATGCCCCAGGAATATGAATGTTACATGTAGCATAATGATTGTTGAGTACAACATAGTATGAAACTTGTGCTAATTTATGAGAAATTAATGTTAAAATGAAGACGGAAGTATCAGCATTGTCTCCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGGTATAATGCTGTTCTTTTTTCCTTTTCCAAGTATTTTCGCTTCAGCTTTTTATATGTATAGCAGTATGGTGAAAGATTATTTTTCTGTTACGTGCGAGTGACCTAACACGACGTAAGACATACCATAAGATTCTTGATCTCGATATGTTGAGGATGTCGTAATCTAGGTTATAGGGAAGTTACATATATGTTGTTTTGTTTTTGAAGTGAGGATAATGTTATTTTGCAAGTTTTGTTCAATAAGTTTGGAAGTTGGAAAAAGCACGATGATATGATGATTACTGAGATAGTGGGAATTTTTGACTGTGTCAGCTCATCAAGAGGCATTGAAGAAGGAAATAGAGAGATTGAGGCAAATCTACCACCAACAGAACCTACAGAAGATGAGTAACACAGTGAACAACAATCTTCAAAACCCATCAACATCACAGCCACAAGCAACTATTCAATCACATTCCCTTCATCAGCATCAGCAGCAGATAGCAGTGTCTCAACCATTGGGATGCAAGGACAAGGAGCAGCTCCTGAGTTGA