Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24565 LG6 9128704 9129902 PREDICTED: MYB-like transcription factor ETC1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   root hair cell development, negative regulation of trichome patterning, negative regulation of trichome patterning, negative regulation of trichome patterning, negative regulation of trichome patterning, negative regulation of trichome patterning, negative regulation of trichome patterning, negative regulation of trichome patterning, root hair cell development, negative regulation of trichome patterning, negative regulation of trichome patterning, negative regulation of trichome patterning, negative regulation of trichome patterning, root hair cell development, negative regulation of trichome patterning, root hair cell development, cell differentiation
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
T/A 9128720 missense_variant p.Leu6His
C/A 9128781 missense_variant p.Asn26Lys
T/G 9128785 missense_variant p.Cys28Gly
C/T 9128789 missense_variant p.Ser29Phe
C/T 9128962 intron_variant
T/C 9128986 intron_variant
T/A 9129055 intron_variant
C/T 9129093 intron_variant
G/A 9129451 intron_variant
G/C 9129562 intron_variant
G/C 9129772 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24565.1
MVNLHLNFNYRSSLFLSTPSQIFNSNHCSSPSINTSQQNSFSSTHTSSSTTLKPPPPSMADSNTSSTQTSSHSSDSGKRGSSKVEFSEDEETLIIRMYKLVGKRWSLIAGRIPGRTADEIEKYWTSRLSSSSK*


CDS Sequence:
>Vu_24565.1
ATGGTCAACCTCCACCTCAACTTCAACTACCGTTCTTCTCTGTTTCTTTCCACTCCCTCCCAAATCTTCAACAGCAACCATTGTTCTTCTCCTTCTATTAATACCTCTCAACAAAACTCCTTTTCTTCAACACACACTTCATCCTCCACCACTCTCAAACCTCCACCTCCTTCAATGGCTGACTCCAATACCTCTTCCACTCAAACTTCTTCACATTCTTCTGATTCAGGGAAGCGTGGATCTTCCAAGGTTGAATTTTCTGAAGATGAGGAAACTCTTATAATCAGGATGTATAAACTGGTTGGGAAAAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACAGCAGACGAAATAGAGAAGTATTGGACTTCGAGACTCTCGAGTTCTAGTAAATGA


Promoter Sequence:
>Vu_24565::LG6:9126704-9128704(+)
TAAAAAAATTCATTAACAAACTAAAAATAAGTAAAACATTATTTTAATAAGTTTAATTATGTTTCAACCTTTTGAAAAATATATATATTTCCAGTTTTTAATAAATTTTTGTGATTTATTAAATATTTAAAATACTTTTTAATTGATTTTTGATTGTTATTCTGATTCATTATCTTGTTTACTTATATATTAAGAAAATATTAAATCATGTTTTTAATATAAAATAATATTATATAGTGATAAATGATTTTTGTTAAAAATATTTTAAATAAAAAGATAGTTATGATTTCTAACTACTTTCACTTCTATACAAGGGACTATCATTATTTCATTATTAATGAAACTATTCTTATTATCTGCTATGTTTTCAATAAAAATAATAAAAATTACTTATAATTTTAAATTAATAGTAATTTTGTTTTATATTAACAACAAAATTGATATTTTCTAACATTATAATATTTTTTTCATATTAACAATAAAACCTCACATATTTAATACATTGAAACAAGTAAACAAGACAATAATATAATACATTAATTACATCATTAAGATTATATAGAAGATTAAACAGAAAATATTCAATTAAAAGATATAAAACTTTTGAAACATATTTAATACATTGAAACAAGTAAACAAGACAATAATATCATACAATAATTACATCATTAAGATTATATAGAAGATTAAACAGAAAATATTCAATTAAAAATATAAAACTTTTGAATACTCAATAAATAAATGAATAAATTTAATAAATACTTAGTTAAAAATATTCATAATCATCATACTTTAAAACTTAATTAAGCCATTTTAATACTATAATATAAAATATAATTATATTTTACAATTTTATTATTAAATTAATCTTTCGGTGGTATCAAGTAGTTGTTAAATTTATATCTTTATATCACTGTTTTAATATTCTATAAAAAAAATTAACTTGATTATGTTTAAAATTTTCTTCGTCTGCGTAAAACACTTTATAACTACACTCATTTCGGAATGTAATTAAAAGGCGAGTATATTTATTTTTTTCTTATACATGAGGCGAATAATATATTTCCTTCCACCATTTGAAACATTAGTTAAAGTCTAACATGTAAGTAGAAGTTTGTTAAATAATAAAAGAGACTCGTAAACTTTTTTATAATATTTTTATGTAGGAATAAAAATGTTGTTTTTCTAATGCTTTTCAATAAGATGTTTTAACTATTAGTTAAAATTTACTAAACATATAAAATTATTAGTAAATCTCATTGAATAAAAAAAGATTTATAATTTTTATTGAGTTTGAGAATAAATTATATTTTGACAAATTTTTTTATTTTATTTTTAAGTTTCATTTTGACATTTTATCTTTCTAAAAAAGTTAGTTTTCTCTTTTAAATTTGGGGTAATTTTTTTCTTCCAAAATTAGAGCAATGTCAATTTTAGAACATTTTTTATTCATTCAAAACATAAAAATTTGTTCCATCAAATTCGTCTGGTGAGATATTTAATTAATTAGAAAAGAAATCCACCAATATAAAAAAGTATTATCTTAAACAAAAGAGAACTATTCATACACAGAAAAAACAAAAAGAGACAATAAATTGTTATCATGAGATCCAATTCACCCTCTTGAATCTCTACATTATTTATTAGCTTCACCTGTAAGAAGATTTTCACTGTGTTCATGACTACTTATGTGTATCTATTCAAACATCTAAAAGTGAATATAATGATATAAAAATCAGTCAGAAAAGTTTAAAATTGTGATAAAATTGGAAACATTATTATTTTAAAATAACTAAATCAATACAAGTTTTTTCTTTTTTTATTTATAAAAATAAAGGATCAAAATAGTTTTAAAAAAATAAAGATAAATCTTTTAAAAAAAAAGAAAAAAAAAAGATGTCCCAGTGAGAATATTACACTTAACTGATATCCTAAGTACAGAAGTAGTAGTTTTCAACTAACAATAAATTGTCCAACTACCTAACAAAGTTAAACTTAAA


Gene Sequence:
>Vu_24565(+)
ATGGTCAACCTCCACCTCAACTTCAACTACCGTTCTTCTCTGTTTCTTTCCACTCCCTCCCAAATCTTCAACAGCAACCATTGTTCTTCTCCTTCTATTAATACCTCTCAACAAAACTCCTTTTCTTCAACACACACTTCATCCTCCACCACTCTCAAACCTCCACCTCCTTCAATGGCTGACTCCAATACCTCTTCCACTCAAACTTCTTCACATTCTTCTGGTATGTATATACATCATTATTCTACACTCTATCTACCAACTTTTTCAGATGTTGCTTCATGCAAAACAAATATTTCAATGCATTTTTAATGATATTAATTTCATTTTACACTTTATTTGCTGGAATAATGATACTAGGAGGGTAGTTGTTGGCTATGTATGTTATGCCTCTTGTTAAACCTGCAAACTTGAGAGTACACACACCCATTAATCTTTGCAGTTTTTTCCACTCCAGTGCTTCTTGTGGGTCACTCTTTTATTCTTTTCTCATGGAACACCAACTACTTTTGGAACCTAATTTCATATTGCTAACTTTTCTAAGTTGCATGTGAGAGTTAATAGCACACTGTCTGGTGTACACTTCTGAAGTTGGAAATTGAAAAAAATTATAACTTTTAATAATTTCTGATAACAATAATAATAAAGAATGTGAAAAAAGACAACTTTTGCTGGAAAAAGGTAGTTAAACACACTCTAGAGTTTATGACAGACACCCAATTATTAACTGACATGCATATGGTTGTGGAAAAGTGGAAACTACTACAATCATCATATATGAATATGTTAAAAGAATATATAGTGCTTACGCGTATCAAGTGATAACAATTTGAGTCTCTTAGAGTTGACAGTGCCTAAGGAAAAATTTGGTAGTTAGCTCTACTTTTCTCTGCATGGTTTTTTAGTGAAAGATGATAAAATCTGTTTAGATTCAGGGAAGCGTGGATCTTCCAAGGTTGAATTTTCTGAAGATGAGGAAACTCTTATAATCAGGATGTATAAACTGGTTGGGAAAAGGTGAGAAAATTTTCTTGTTAACATGCTTTGAATCTTACCCTTTTAAGCAGTGTGCAGATGGAGCTTGTAAAAACAATGTGTTTCTTTTTAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACAGCAGACGAAATAGAGAAGTATTGGACTTCGAGACTCTCGAGTTCTAGTAAATGA