Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_24612 LG6 9769977 9772955 PREDICTED: probable receptor-like protein kinase At1g49730
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, plasma membrane, mitochondrion, mitochondrion
Molecular Function   enables   transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, ATP binding, ATP binding, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity
SNP Position Effect Amino acid change
G/A 9770342 upstream_gene_variant
C/T 9770360 upstream_gene_variant
T/G 9770361 upstream_gene_variant
A/T 9770528 missense_variant p.Lys72Ile
G/T 9770566 missense_variant p.Val85Leu
C/G 9770667 upstream_gene_variant
T/A 9770755 upstream_gene_variant
T/A 9770800 upstream_gene_variant
C/T 9770869 upstream_gene_variant
T/C 9770964 upstream_gene_variant
C/A 9770970 splice_region_variant&intron_variant
T/A 9770989 missense_variant p.Phe114Tyr
A/T 9770999 synonymous_variant p.Ile117Ile
T/G 9771195 downstream_gene_variant
G/A 9771365 downstream_gene_variant
C/T 9771450 downstream_gene_variant
A/G 9771504 downstream_gene_variant
T/G 9771522 downstream_gene_variant
G/T 9771528 downstream_gene_variant
T/C 9771571 downstream_gene_variant
G/T 9771587 downstream_gene_variant
G/C 9771643 downstream_gene_variant
C/G 9771700 downstream_gene_variant
T/C 9771701 downstream_gene_variant
T/G 9771769 downstream_gene_variant
G/T 9771819 downstream_gene_variant
G/A 9771841 downstream_gene_variant
A/C 9771856 downstream_gene_variant
A/G 9771962 downstream_gene_variant
C/T 9772498 splice_region_variant&synonymous_variant p.Asp201Asp
T/G 9772500 missense_variant p.Phe202Cys
A/T 9772600 synonymous_variant p.Ile235Ile
A/T 9772665 missense_variant p.Asn257Ile
A/T 9772671 missense_variant p.Tyr259Phe
A/T 9772688 stop_gained p.Lys265*
A/T 9772708 synonymous_variant p.Ala271Ala
A/T 9772797 missense_variant p.Gln301Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_24612.1
MDPFVHKLRRHLRAWLHRSRSGAVFFVRRISYKDVRRATDGFHRVLYSNSDVSAYAARFEDSGGVCLVREVKGFDEGSDHFYRHVQFLGRLRHRHLLSLRGFSVGRNRKRLLIFDNIENGSLKDHLNDPLKTPLDWRTRLQIANGVVAALEYLFLFSEPPVCHVSITSSNIMLDENFTAKLSDFGLLPSGGNSDTMPYSEDFLKQKSCRIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFYNSIDKMIDPDLGNNYDCTELKSLLAVAKLCIKSWDKPSFTIPQLFRHLQRKIHITHQ*


CDS Sequence:
>Vu_24612.1
ATGGATCCCTTCGTCCACAAGCTCCGTCGCCACCTTCGCGCATGGCTTCACCGATCTCGCTCCGGTGCGGTGTTTTTCGTGCGGAGAATTTCGTATAAAGATGTTCGAAGAGCAACGGATGGCTTCCACAGAGTTCTATATAGCAATTCCGATGTTTCTGCGTATGCTGCCAGGTTTGAAGACAGTGGCGGCGTTTGTTTGGTGAGAGAAGTGAAAGGCTTCGATGAAGGAAGCGATCATTTTTACAGACACGTGCAGTTCTTGGGACGCTTGCGACATCGCCACCTTCTCTCGCTCAGAGGTTTTTCCGTCGGGCGCAATCGCAAGAGGTTGCTCATATTTGACAATATAGAAAATGGAAGCTTGAAGGATCATCTAAACGACCCTTTGAAGACTCCCTTAGATTGGAGGACGAGGTTGCAGATAGCCAATGGCGTTGTGGCTGCACTGGAATATTTGTTTCTCTTCAGTGAACCACCCGTATGTCATGTCTCTATCACCTCAAGCAATATTATGTTAGATGAGAACTTCACAGCCAAGTTATCTGACTTTGGCCTTCTTCCATCGGGTGGAAATTCTGATACGATGCCATATTCAGAAGACTTCTTGAAGCAGAAAAGTTGTAGGATTATATTCCAACTTGGAGTACTCATACTAGAATTGGTCACCGGACAGTCTTCAGAGATGGAAGGTTCCGATTTAATAGAATGGATCCAAGAATCACGATTTTACAATTCCATTGATAAGATGATAGACCCAGATCTTGGTAACAACTATGACTGTACGGAGCTTAAAAGTCTTCTCGCTGTGGCAAAACTATGTATAAAATCATGGGATAAGCCCTCATTTACAATTCCTCAGTTATTCCGGCATCTCCAGAGGAAGATTCATATTACTCATCAATAG


Promoter Sequence:
>Vu_24612::LG6:9767977-9769977(+)
ATATTTACTCCTGTTAAATATGATTATCAGTATTTGTGTTTTATATAAATAATTGTTTAAAAATATTAATGATGTTTTTTTTAAATATTGACAAATTCGATTAAATTAAGTGTTTTTTTTGGTTGTATGTGATTTATTTTAAAAGTATATTAATGAATATTTATCTCGCAAATAAGTTCACCATCCACATGGTTGTGAATCAATGTATACTTTAAATATATATATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATACAAAAATCAAAGGAAGGATAATTTTTGGAGATTTAAAATCTTCCAGAAGTTCAGAAATAGCATAAAAATGAATAAATGAAAACCAAGTAAATCACATAACATATTTTATCAATATATTATTATCACATAAAAATTATCATTTAATATTTATGTTTGGTATACATAAAATTATTATTTATATTATTATTAGTATTATTATTATAAATATAATTTATGTATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATACAAAAATCAAAGGAAGGATAATTTTTGGAGATTTAAAATCTTCCAGAAGTTCAGAAATAGCATAAAAATGAATAAATGAAAACCAAGTAAATCACATAACATATTTTATCAATATATTATTATCACATAAAAATTATCATTTAATATTTATGTTTGGTATACATAAAATTATTATTTATATTATTATTAGTATTATTATTATAAATATAATTTATGTATATATATATATATATATATATATATATATATTAACATATATCATGATTATGATATTTTTTGTCATCATTATTTTAATGGTTTAAAATTTGACTGTAGTTTTTATATTATAGAAAAGTAGATTAAAAGAAATGCTAAAAGGGTGTAATGTTTTCAAAGTCTGTAAATTAACGGGTTAGACAAACTTATTTTATTAAAGCTCACTAATATAGGAGTGAGGTCAAATTTACATAAAAAATTATCAATTCGTGGTTATCTGAAGTAGTTAAAGAAGATACTTATCTCAGTAACGCTTTATAGTAATATATTTATCTCTTATTAATAAATTAACCTGAAATTGATTAGGAGACTTAATTTAATTAGAGAGAAAAGTTGACCACGTGTGCTTAAAATTATTTATTCACAGTAAGTCTAAACTTAACTTTAGAACTATTTATTTAATTAAAAAACTCAAACATTTAACAAAAAATTGAATAGTTTAGTAGTACATCCCCTTCACGGGTATGTACTTAGGGTTGGCCAATTGTGTCGCCAGCCTGGCCTGCATGCAAGTGTGAAATTGAAGGAGTTTTTTAAATTGAATTTAAGCTCGCAAATGGATCTTATATAAAATTGGCTAATAAAGGAGAGAAAAATATCATAATAATTCACGATATTTTTTTACAATATTTTAATATTATCGTATCATTATATGATTAGTCCATGTTAATATTTATAATTATTATTAATTGTAAAATAATTTTAAATCAATTATAATATTATCAAAAAAATATTGTCAAAATATAATTATCTCACTTAATATTAATAAATATTTGACGTGGTTAGTCCCACTAGAAAGTACGAAGCTGTCAACTCTATTTAGACTTTGAAATAGTTCTCAGCAACCTTCTCAAATATTAAGAATAAAACATATGAAATATTTTTAGTTTAAATATATTTTGCTAGAACTATTAGTGAAAAATAAAATCATCATAAATATTAATGAACTGTTTTTTATTAAACAATAAACATGTTGATAATACGTTTTTAAAGTAAATTAGTTTCTAAAGAGAGTGCACAGGTAAAAAAAAACTCGTTTTTTTTGCTTTACTCTTACACTTACTCCTCTGACTAAAAACTGAATTAAATAAGAAACCGTTTGGATAGCGTCCCGTTATGTTATTACTTATTTTTAATTAACCTTTGAAGGGTGACGTTG


Gene Sequence:
>Vu_24612(+)
GACGCACGTTGAAACTGTTCCACAGTTCTGTTATCTGTTCTATGTGTCTCGACGTTTTCTCTCTCTCCTCAAGACCAAAGATAACAGGAATCGGCAGATTCGTTTTCATAAAGAGTCCGTTGTTCCAGTTTGGCAAACAGCTACAAAGCGAATGGAATTTGACGGTGTTACATCTCCTCTAAACTCCGTTATCCTAAACCAACATCTCCATGGATCCCTTCGTCCACAAGCTCCGTCGCCACCTTCGCGCATGGCTTCACCGATCTCGCTCCGGTAATCACAATTCTCACTCCACACTCCTTCCTCTCAATCACTTCTCTCTCAATTTCATCGAATTTGAATCCAATTATCAAATTGAACTCCACGCTCGAAGTTCTCCATCGCTGTGTCGAATTGTTCAGGTGCGGTGTTTTTCGTGCGGAGAATTTCGTATAAAGATGTTCGAAGAGCAACGGATGGCTTCCACAGAGTTCTATATAGCAATTCCGATGTTTCTGCGTATGCTGCCAGGTTTGAAGACAGTGGCGGCGTTTGTTTGGTGAGAGAAGTGAAAGGCTTCGATGAAGGAAGCGATCATTTTTACAGACACGTGCAGTTCTTGGGACGCTTGCGACATCGCCACCTTCTCTCGCTCAGAGGTTTTTCCGTCGGGCGCAATCGCAAGAGGTTCGTCCAGTATGCTCTGTTTCGCATTTCACAGGGATTTATGAAAACAAATTTAGAAGGTCTTTTATTGCGATCATGTCATGTTTCTTGATATTTGGAAAATTAGAATCACTTACAATTAACGTTGCAGCTGAAATTATAGACATGGACTGCTTTTTAATAAATCTTGAAAAACGTTATATATTTATCTTCTTGATTTAATTTTTCAATATGTAATTGTTGAATTCTATTGTGTGAGAAGTGGACGTGGATCACTGTTTGTTACAGTTAGTCTTCACGGTAGTGTGGGTAGGTAAAGCAATTTTGTGATTACTTTTTTTCTTGTATCTCTTCAGGTTGCTCATATTTGACAATATAGAAAATGGAAGCTTGAAGGATCATCTAAACGGTAAATTTAGAAAGCTGAAAAAAATGACTTAGAGGAGCTTCTCAATTACATGTTTTTTATTTCGTTTCAATGATTGGGTGTTGGCAGACCCTTTGAAGACTCCCTTAGATTGGAGGACGAGGTTGCAGATAGCCAATGGCGTTGTGGCTGCACTGGTATGTTCTTCAAATTAAAGCATGTCAGAAACCAGAATAGCCTAATATTTTCAGCATGAAACTGCGATCTTATTAATTTTCCGTGGCAATTAATTTGAAGAGCCTGAAATTCTTATGTCTTGTTGAGTTTCTAAATTGGTTGTGGATACGGGAAAACTCTTGATAACTTAGATAGTCATGTAGCAAAGTGAATATTGGAAACTCGCTCACTTGGTTCCATACACGAGGGAAGAAGTTAGCTTCTGTGTGGATTCAATTGGCGATCGGTGTCGTTTAGTATTTATGACTTGGAACTCCTGATTATTGACATAGTTAACAAGGTTAAACCAACACAGGTGAACAGGTAAAACATACGAGGGATCGTAATAGAATCATGTTGAAGAAATTCATGATCCCATAACGTCGGGACAAGAAATACATTTTTCTAAATCTTTTTGTTAGGAAATAGCACATATTAGAGGTTAGATCTGTATTAAAAACATAGGACTCTTCTGATTGGTAACACTCTGACACTCTGGCACCTTTCCGAGGTTGAAGAATTATAAGCTTTGCTACGATCACGAAATTCTTTGTTTCATAAGTATCAAGTTGCACAAATGGTGTTCTCATTTCTACCTGGACTTACAGTGTGACGGCTAAGAAAGTTATGCTTAACGAGTCATACGTACTGAAGTCGGGTAAGGTGATAGTTATACTCTCTTTTGGTGCTTTAATCTAAAGCCTTGAAGGAAAAGTGAAGAAATAGGAAGTAGAGATGGACAGCTAGGAGAGAGGATAAAATAAAGGTAAAGTTTGGGGAAGTATAGACAGGGTAATACTGTGCAAGAACATTGTGGTTTCAACAATAATTGCTTGTTGATTTCTTTTTTAATATTTAACTGAAAGATTAAGAGTCTCTTTTCAAGCATGGTTATCTGATTTTTGTCCATGTGGAAGCAGGAATATTTGTTTCTCTTCAGTGAACCACCCGTATGTCATGTCTCTATCACCTCAAGCAATATTATGTTAGATGAGAACTTCACAGCCAAGGTAAGGAAATAGTTCCCTTTCTCACTGTAAACTCTTACCTCTTCAAATTATATATCGTTTCAGATTGACATGCCGAGGGCTAATCGTATTAAATTAGATTGACTTCTGCAATTACAGTTATCTGACTTTGGCCTTCTTCCATCGGGTGGAAATTCTGATACGATGCCATATTCAGAAGGTCACTTCTTGTAAACTAGTCTTATAAGTTTCAAGAAAATCAAATTTGAAAGTGCTTACATTTTGTTACCACACATATTTGCTTACCATCCTCGTTTATTTCAGACTTCTTGAAGCAGAAAAGTTGTAGGATTATATTCCAACTTGGAGTACTCATACTAGAATTGGTCACCGGACAGTCTTCAGAGATGGAAGGTTCCGATTTAATAGAATGGATCCAAGAATCACGATTTTACAATTCCATTGATAAGATGATAGACCCAGATCTTGGTAACAACTATGACTGTACGGAGCTTAAAAGTCTTCTCGCTGTGGCAAAACTATGTATAAAATCATGGGATAAGCCCTCATTTACAATTCCTCAGTTATTCCGGCATCTCCAGAGGAAGATTCATATTACTCATCAATAGAATTGTTACCTGTTTTCTTTGAAAACCTTTTAGTTTCTTGGGAGAATAATTAGCACTCCCTTTTGTAAGTACTTACTTTCACTTTTCGGGTTGCTTTTGACAAGTGTGATGATTTTCATTTGAAATTACATCAGGAGAAAAAATGTTAGTTGTC