Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25276 LG6 15795293 15799205 PREDICTED: U-box domain-containing protein 35-like isoform X2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   phosphorylation, protein phosphorylation, phosphorylation, protein phosphorylation, defense response, protein phosphorylation
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   protein kinase activity, ATP binding, protein kinase activity, kinase activity, protein kinase activity, ATP binding
SNP Position Effect Amino acid change
T/C 15795414 upstream_gene_variant
T/A 15795943 missense_variant p.Asp616Val
A/C 15796050 synonymous_variant p.Pro580Pro
G/A 15796169 synonymous_variant p.Leu541Leu
C/A 15796435 upstream_gene_variant
T/A 15796980 synonymous_variant p.Ile453Ile
G/A 15797030 missense_variant p.Leu437Phe
C/T 15797034 synonymous_variant p.Arg435Arg
C/A 15797035 missense_variant p.Arg435Met
G/A 15797085 synonymous_variant p.Arg418Arg
A/G 15798068 downstream_gene_variant
A/T 15798300 missense_variant p.Phe166Leu
A/T 15798546 missense_variant p.His144Gln
T/A 15798612 missense_variant p.Lys122Asn
A/T 15798752 downstream_gene_variant
C/A 15798896 splice_region_variant&intron_variant
T/A 15798958 downstream_gene_variant
T/G 15798962 downstream_gene_variant
T/A 15799164 synonymous_variant p.Gly14Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25276.1
MWLPHPKGSGIRKGVGGGGGGNGIVAVAIDKDKGSHYALKWAVDCLLGRGQTLILLHVLHGTSSHVSRGSEALVCNIANSSAYPQRYQLDTTTKDLLLTFHCYCTRKDIHCLDVLLEDNDVVKAITEYVSYAAIENLVIGATSRHGFIRFKSSSCASTSISKGAPDFCTVFIISKGKISSVRNATRPAAHTSPLLIHIRNLKNKDENHQEIPFRNTNTKDRTPFKPQSWHDESIQSPFPRGRGTNRLSCVDFPDSDTEISFVSSDRPSSCRSSSVYDYIDASRTPRASTSSDHSCGSTRLGLKFNDLGSPDTSFSHESSRTSFSYSSQSMDEEAAEADMKRLKLELKQTMDMYSKACREALTAQHKLMELTHWRIEEEKKLDEARLAEEAALAIAEKEKARCRAAMETAEASKKIAEVETRKRATVEVKALKEAEEMRKLLDNLAQTDVRYRRYCIEEIEAATNFFSESQKIGEGGYGPVFKCFLDHTPVAVKVLRPDAAQGKSQFQQEVDILSCMRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFRKRTNKVLSWQLRFRIAAEITTGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAEDVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHHAGQAIEKETFEEMLDPSVTDWPLQQALCLANIAVKCAELRRKDRPDLAKVVLPELDKLRDFAEENITLRLFPINLGCTAPSPCHSETSVQQDVISDPRLVHSVGSSAPSTPTEEKH*


CDS Sequence:
>Vu_25276.1
ATGTGGCTTCCACATCCTAAAGGATCAGGGATTAGAAAGGGAGTAGGAGGAGGAGGAGGAGGTAATGGAATAGTAGCAGTGGCTATAGACAAGGATAAAGGAAGCCATTACGCTCTTAAATGGGCTGTTGATTGTCTGCTTGGCAGAGGTCAGACTTTGATTCTCCTCCACGTTTTGCACGGGACATCCTCACATGTTTCCAGGGGTAGCGAGGCCCTTGTTTGTAACATCGCCAATTCATCTGCGTATCCACAGAGATACCAACTTGATACCACTACCAAGGATTTGTTGCTCACTTTCCACTGCTATTGTACACGCAAAGATATACACTGCCTTGATGTCCTACTTGAAGACAATGATGTTGTGAAAGCAATAACAGAATATGTCTCTTATGCTGCGATTGAAAACTTGGTGATTGGTGCAACATCCAGGCATGGGTTTATTCGATTTAAGTCATCATCATGTGCATCAACTAGCATATCAAAGGGGGCGCCGGACTTTTGTACCGTGTTCATCATTTCAAAGGGAAAAATCTCGTCAGTTCGGAATGCTACTCGTCCAGCCGCGCATACATCCCCACTTCTGATCCATATACGTAATCTAAAGAACAAGGACGAAAATCATCAAGAAATACCCTTCAGAAATACAAATACGAAAGACAGGACGCCATTCAAACCTCAGAGCTGGCACGATGAATCTATTCAGTCTCCATTTCCAAGAGGAAGAGGCACGAATAGATTGTCATGCGTGGACTTCCCAGACTCAGATACGGAAATATCATTTGTAAGCTCCGATAGGCCAAGCAGTTGTCGTTCGTCCTCCGTTTATGACTATATTGACGCAAGCCGAACTCCGCGGGCTTCTACCAGTTCAGATCATAGCTGTGGATCAACCCGATTGGGACTCAAGTTCAATGACCTCGGTTCACCCGATACCTCATTCTCTCACGAAAGCAGTAGAACATCATTCTCATATTCATCACAGAGCATGGATGAAGAAGCAGCAGAAGCTGATATGAAAAGGCTGAAGCTTGAGTTAAAGCAAACGATGGATATGTACAGTAAAGCATGCAGAGAAGCACTAACAGCCCAGCATAAGTTAATGGAGTTGACACACTGGAGAATTGAGGAAGAAAAAAAATTGGATGAGGCACGATTGGCTGAGGAAGCTGCGCTGGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGCAGCCATGGAAACTGCTGAAGCGTCGAAGAAAATTGCTGAGGTTGAAACACGCAAAAGAGCGACTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAAATGAGGAAGCTTTTGGACAATCTAGCCCAAACTGATGTAAGATATAGGAGATACTGTATAGAGGAGATTGAAGCAGCCACGAACTTCTTTTCTGAATCCCAGAAAATCGGAGAAGGAGGTTATGGCCCTGTTTTTAAATGTTTCCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGGTTGACATTCTGAGCTGCATGCGACACCCAAACATGGTGCTTCTTCTGGGAGCATGTCCGGAGTATGGCATATTGATATATGAATATATGGCTAATGGAAGCCTAGAAGATTGCCTGTTTCGAAAAAGGACGAACAAGGTTCTGTCTTGGCAGCTGAGGTTCCGAATTGCTGCAGAGATAACGACGGGCCTTCTATTCCTGCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGCAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGCGATGTTGGATTAGCAAGGCTTGTCCCAGCAGTTGCGGAAGACGTGACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGCGTGAAGTCGGATGTTTATTCTCTAGGAATAATTTTTCTTCAACTATTGACTGGCAGACCTCCAATGGGTTTAGCTCACCATGCCGGGCAGGCTATAGAGAAAGAAACCTTTGAGGAAATGCTGGACCCCTCTGTAACCGATTGGCCTCTTCAACAAGCCTTGTGCCTTGCAAACATAGCAGTCAAATGTGCGGAACTTAGACGAAAAGATAGGCCAGACCTTGCCAAAGTGGTGTTGCCAGAGCTCGACAAATTGAGAGACTTTGCAGAAGAAAACATTACACTGCGATTGTTTCCCATCAATTTAGGATGCACTGCGCCCTCTCCCTGCCACAGTGAAACTTCTGTGCAACAGGATGTGATAAGCGACCCGCGCCTTGTACATTCCGTAGGCTCATCAGCTCCATCAACTCCTACAGAAGAAAAACATTAA


Promoter Sequence:
>Vu_25276::LG6:15799205-15801205(-)
TCAACATCTCATCTTTTATTTCTTATTTTTTACTAGTTTTATTTTTCTCCATCTCTTTCTTTGATGGAGATGCTTTTTTCAGTATGAGTATGCTTTTTTGAATATCAGTATGAGATGCTTTCTTGAATATCAGTATGAGCATGCTTTTTTGAATATTCACCTAACATTTTATCTTTATTTATACTTAACTTTTTTTCTCTCTCAAAATTATCTTTCAATTTCCTTTTCATCCATGAAACAAATCGTCAACAAACAATTTGTCATAATCATTAAGTTAAAGGACATTTTTAACATCAGTACTTATCATAAATCTAAAAAATAATATAAAAATTAAAAACATATATAAAAAAACTAAATGAATATCAATGATCAAAACTCTAATACAATTGATGAGAAACCAAATGAAACAGTATTGATATTCAGTTTGAAAAAACATAGTGATATCACACTCAATAAATATTGGGTTAAATATGTTTTTAGTCCCTAAACTATTGGTCATTTCTGGTTTTCGTCCCTCTTCCAAAGTAAGGTACACTTTAGTCCTCAATCTTTAAAAAACGTTCGTTTTAGTCGAAAAAACGAACGTTTTGAGGACTAAAACGAGGACTAAAAACAAAATTTTGAGGACTAAAACGAACGTTTTTCTAAAGAATGAGGACTAAAGTGTACCTTACTTTGGAAGAGGGACGAAAACCAGAAATGGCCAATAGTTTAGGGACTAAAAACATATTTAACCCATAAATATTATACAAAATCTTCTATATTCCATAATAATTCTCAATAATTAATAGTTAATATATACTAATATCGTATTTAATTATCATTATACAAATAACTATTTTATATATTTAATTAAAAAATAAAAATTAAAAATTAAAAAAATTCAAAACACCTTTCAAAATCAGGATGAATCTTAACACTAGAACGAGATAAGATGGGGTGCGACTTCTTTTAAAAGTCATAAAATTTGGGAAAAAAATTTACTTGAGCCCACGATCGAAGTCAAATGTCCATATCTGAAGGGAACATATTGTCTTTCTAAGTCATGAAAGGGTGAACTCTCCTTTTCTTAGTGTTTTTATTCATTGTGGATTAGCTCTAACTTGCTATTAAAGATCAAAAGAAAGATTTACTTACAGACAGTTGGTAAAAACTTTAAATTAAAAATATAATGTATAACCAAATATTAGGTGTATGGTACCTTTAATATTAGTATGTATTTATAAACTTTTTAGACATAGTAAGATTAAGTAACCAAAATTATATTTGATTATAAATAGTGTTTAAAATATCAACTTTCAATCATTAATTCTGTTTGAATCGATGACTGACTATATGAAAGATTCAAACTACCTATTAGTCAAAGTTTATAATAGGTTGGTATGTACTATAGTGATTAATAAAAATTAGTAACAATTTAAATTTTATATATATATATATATATAAAGACCCGTGTACTAATTAATAGCTATATAGTGTTGACAAGTTTTGTAAAAAAATAATAAATAGTCTTTTATATGAAATAATTAATATTCTTCATAATGAGAGCTATATAAAATGAAATAAAATTATTAAAAATAAGAAAAAATGTATTTAATTCTACCATTAAAACTTTTAAAAAGAGAATAAAATATTTTGCGATAAAAACTGACAAATTCCACTGAATAGAGGGACATAAATATAAATATGCCATAAATATTAAAAAAATGAGGAAATTAGAAAAAGTTAGGGGTAGAAGAGCGAAGTTATTCTTTGGCACTTGTATTTTAAGGCAATTGTATTGAATTTAAGGTTTTTGTTTCATGTGTTTACCTCTAAAACTAATAGGATAAGAAAAGAAAATTTTGATTGAATGGGCATAAATTAGGGATAGTTTTTAGTTCTGTTACTTAAAAAATAGGATCGTTATAGAAAAGAATGAGAAGGCAGATGAAGAGTAATTTTAAAATTAATTTGGGAGATGAAATGAAATCTGCACGCGTTGGCTGAGAAGAAGAGAA


Gene Sequence:
>Vu_25276(-)
ATGTGGCTTCCACATCCTAAAGGATCAGGGATTAGAAAGGGAGTAGGAGGAGGAGGAGGAGGTAATGGAATAGTAGCAGTGGCTATAGACAAGGATAAAGGAAGCCATTACGCTCTTAAATGGGCTGTTGATTGTCTGCTTGGCAGAGGTCAGACTTTGATTCTCCTCCACGTTTTGCACGGGACATCCTCACATGTTTCCAGTTAGTCCTATTTCTTCTTTTATTCTCTCAAACATTCACAAAATCAATTTCGTAAAGAAACTGGGATTCTTATTTCAATCCTGTTATTCTTTTTTTCCATCGTAACAGGGGGTAGCGAGGCCCTTGTTTGTAACATCGCCAATTCATCTGCGTATCCACAGAGATACCAACTTGATACCACTACCAAGGATTTGTTGCTCACTTTCCACTGCTATTGTACACGCAAAGATGTAGGTGTCACGCTTTTGTTTTTTTATTTATTTATTTTTTTTACTCAAATTAGTATGATAACACGGTATTCCATTTTTCCCCCACATTATTCGCTGCTGTACAAAATATTTCGTTAGATACACTGCCTTGATGTCCTACTTGAAGACAATGATGTTGTGAAAGCAATAACAGAATATGTCTCTTATGCTGCGATTGAAAACTTGGTGATTGGTGCAACATCCAGGCATGGGTTTATTCGGTAGGATTTCATGTCTGCAAGTTATTCTTAAATTAGGATTGAATTCGTAACTATTTTTAAAAGGATGATAATTTTGAAATTTGTGGACAGACACACGCAAAAAGATGAGTAATTCTCATATAGTATTATCCATCATACATGTCGTTGCACCTTTCTTAATTTAGTCTTTCCTTGTGCAGATTTAAGTCATCATCATGTGCATCAACTAGCATATCAAAGGGGGCGCCGGACTTTTGTACCGTGTTCATCATTTCAAAGGGAAAAATCTCGTCAGTTCGGAATGCTACTCGTCCAGCCGCGCATACATCCCCACTTCTGATCCATATACGTAATCTAAAGAACAAGGACGAAAATCATCAAGAAATACCCTTCAGAAATACAAATACGAAAGGTTTGTTTCTGTTGTGTGTGTGTGTTTGTGTATTCCGCATCTATCAATTCTTGCTTGCACTTAGTTTTAATCATGTGTATATATGCTGCAGACAGGACGCCATTCAAACCTCAGAGCTGGCACGATGAATCTATTCAGTAAGTCTCTAGTCAAACCATTCAAAGTCCAAGCCCATAATAATATAACACGGTTTCCTTGGTTCGGTTGGGTTGAAGCAGGTCTCCATTTCCAAGAGGAAGAGGCACGAATAGATTGTCATGCGTGGACTTCCCAGACTCAGATACGGAAATATCATTTGTAAGCTCCGATAGGCCAAGCAGTTGTCGTTCGTCCTCCGTTTATGACTATATTGACGCAAGCCGAACTCCGCGGGCTTCTACCAGTTCAGATCATAGCTGTGGATCAACCCGATTGGGACTCAAGTTCAATGACCTCGGTTCACCCGATACCTCATTCTCTCACGAAAGCAGTAGAACATCATTCTCATATTCATCACAGAGCATGGTGAGTGAGTAAGGACATGTGTTTTTCCTTTATTCTTTATACGTCACTTCTATTGATTGATTATATATTCATATTATCTTAGTAACGCAAGCTTTATCATTACATTTCAAACAAATAAATAAAATTGTCTAATCACGTTTGAGCCCATCAATACCTGACCATTGAAGGTATCAACTTCCCTTTGCTAAAATAATATAGGATGAAGAAGCAGCAGAAGCTGATATGAAAAGGCTGAAGCTTGAGTTAAAGCAAACGATGGATATGTACAGTAAAGCATGCAGAGAAGCACTAACAGCCCAGCATAAGGTATATTCTGAAAAGTATACAATCCCTTTTTCTACAAATGTGTTATTGGGATTTCAACTGGTACCACTATTTTGGTTGCTACAGTTAATGGAGTTGACACACTGGAGAATTGAGGAAGAAAAAAAATTGGATGAGGCACGATTGGCTGAGGAAGCTGCGCTGGCAATTGCAGAGAAAGAGAAAGCAAGATGTAGAGCAGCCATGGAAACTGCTGAAGCGTCGAAGAAAATTGCTGAGGTTGAAACACGCAAAAGAGCGACTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAGGAAATGAGGAAGCTTTTGGACAATCTAGCCCAAACTGATGTAAGATATAGGAGATACTGTATAGAGGAGATTGAAGCAGCCACGAACTTCTTTTCTGAATCCCAGAAAATCGGAGAAGGAGGTTATGGCCCTGTTTTTAAATGTTTCCTTGATCACACTCCAGTTGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGGTGATCAACCAGTGGACATGAGTAATTCTACACCACTTTTTTGGTATTTAACTGCATAACATGTTTCCATCGCGTCTAGTTTACGTTAGGCTTGGCCTTTTATGATGAATGAGTATGAGACCTTGAAAATCTGATGAAAACACAACACTGATATCCATATGGTTGGACAGGTAGCCTCTCTTCCACAACCTTATTTTATATCTCAAACTTTTCGTCACATCTCTTTCTTCTTTCCATTTCTCTTCACTTTTTTATTCAATCCATTTCTTAAAACCCAAAATTGGGATGAAAACTCCTCCATCACTTCCCAATGAAATCTAGCCAATTCCAAAGACACATACACGCACAGAGAGTGGAGAGAGAAGGAGAATTTTGGATCTCAAGGGTAAACCATACATAATTTAAAGTCTATTTTTATAGTCTTCTGGGTTCTGATTCATACTGCCTGGAACGGAATTGTAGGGTATACCAATCGGAAATACTAGCCAAATTTGTTGTGGGAGAGTGATATTTGTTATCAATTCTAAATATATAAATGTGCGTATGCAGGTTGACATTCTGAGCTGCATGCGACACCCAAACATGGTGCTTCTTCTGGGAGCATGTCCGGAGTATGGCATATTGATATATGAATATATGGCTAATGGAAGCCTAGAAGATTGCCTGTTTCGAAAAAGGACGAACAAGGTTCTGTCTTGGCAGCTGAGGTTCCGAATTGCTGCAGAGATAACGACGGGCCTTCTATTCCTGCATCAGACCAAGCCTGAACCTTTAGTGCACCGTGATCTGAAACCAGGCAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGCGATGTTGGATTAGCAAGGCTTGTCCCAGCAGTTGCGGAAGACGTGACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGCGTGAAGTCGGATGTTTATTCTCTAGGAATAATTTTTCTTCAACTATTGACTGGCAGACCTCCAATGGGTTTAGCTCACCATGCCGGGCAGGCTATAGAGAAAGAAACCTTTGAGGAAATGCTGGACCCCTCTGTAACCGATTGGCCTCTTCAACAAGCCTTGTGCCTTGCAAACATAGCAGTCAAATGTGCGGAACTTAGACGAAAAGATAGGCCAGACCTTGCCAAAGTGGTGTTGCCAGAGCTCGACAAATTGAGAGACTTTGCAGAAGAAAACATTACACTGCGATTGTTTCCCATCAATTTAGGATGCACTGCGCCCTCTCCCTGCCACAGTGAAACTTCTGTGCAACAGGTTTTTACTTTATTGTTCCCAAATCACCTAATATGCATAACAATTAATTATTTATCATAATATGATGATATGATGACATTTACATACATACTATAGCAGCCTTCCAATTCCATGACCTTGTTGAGGCATATTGCAGGATGTGATAAGCGACCCGCGCCTTGTACATTCCGTAGGCTCATCAGCTCCATCAACTCCTACAGAAGAAAAACATTAA