Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_25866 LG6 28306011 28306759 PREDICTED: MYB-like transcription factor ETC3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cell differentiation, stomatal complex formation, cell differentiation, positive regulation of trichoblast fate specification, stomatal complex formation, positive regulation of trichoblast fate specification, positive regulation of trichoblast fate specification, positive regulation of trichoblast fate specification, epidermal cell differentiation, stomatal complex formation, epidermal cell differentiation
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, protein binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding, protein binding
SNP Position Effect Amino acid change
G/A 28306050 missense_variant p.Asp14Asn
G/T 28306245 intron_variant
C/A 28306246 intron_variant
A/G 28306247 intron_variant
G/T 28306264 intron_variant
A/T 28306374 intron_variant
T/C 28306625 intron_variant
T/A 28306630 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_25866.1
MADIDRSSDNASADSKEKSLQTSTMEFSEAEEILIAMVYNLVGERWSLIAGRIPGRTAEEIEKYWTSRYSTSQ*


CDS Sequence:
>Vu_25866.1
ATGGCTGACATTGATCGCTCATCTGATAATGCTTCTGCTGATTCTAAAGAGAAATCCCTACAAACTTCGACTATGGAATTTTCTGAGGCTGAGGAAATCCTTATTGCCATGGTGTATAATCTGGTTGGGGAGAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACTGCAGAAGAGATAGAGAAGTATTGGACTTCAAGATATTCAACTAGCCAATGA


Promoter Sequence:
>Vu_25866::LG6:28304011-28306011(+)
AATACTAATTTTGTTAATATTATTTTACAAATAATGGTTCAGCAATTAATAAATAAAAAAGTCCAATTCAAATATATTAAAGGTTATATACTTTTTTTTATACAAAAAGTTGGCTTAATTTGTCAAGTATTTGTAAGATTCTATTTTCTCATGTAAATTGAAAATATATCTTCTGAAATTTAAATATTGTATCATAAAATTGATTTAAGAGGTTAGAATAACTTTGTCAGAATAAGTTAGAAGACACAGTGATTCACTCAAAGATCTGGCCAAATACGTAATATATTAAATTATCTGTTAACCATGACACTATCTGTTAGTTTTTAGCATATTATTGAATTAAGTATTATGTTGCTGTAGATGATGATTGGAATATACGATCTTAGAAATTATATTTATTCAAAGAAAATAAGAAAAAATGGTTTTATTGGAACCATTGATTAGAAGAAGTTGTGACAACTTTAGCAATTTAACACTGTCACCACGTTCTTATCCCTTGACTCAGCCCTATCTATACATAGCATTACAAAACAAAGCATGTTTTTGTTTGATTATAATTGCGTACCATCGTATATAGTAAATTAAGTTTCTCTTACAAAACGTGTGCAAGATGTTCTGGTAAACGCAAAGTCCTTTCTAATCATACCAATTTTCCACCCTTTTTCAACCTTCAACATAATCACTTCCATCTTCAACCTCAACCATAAAAAACTCAACTTTTTTATTTTTACACTTCAATTTTTTAAAAGGTAACTGCTTTTGTTTTATTTTTCATCATCTTCATCCAAAACATTCTTCTTTCCAATTTGAGTTTTCTGCGTCTAAAAGAAAGAAATCAGTTTTTCTTTGGGTAGCAAAGTAGCGAAAGCGATGTTCGTGCAGGTGTTATATGAGTTTCTAGATGATTGATTGGTCGGAGTTTAGGATCTAGAAGATTGATTACTATATTGTTTTCCTTTTGGGGTGACTTAAAATTTTACATCAGTGTGTTTTACGAGGTCCTTTGTTTACTTTATTTTGGCATTTCCCTCTTATTGAAGAAAGAGACAGAATCAGTGCAGAATTTACCAGCTACCACCCTCCCAACAACTACTAATTTCCTTCGACTTTTCAAAGGAATTAACAAACTACGTCTTTTTTTTTTTTTTTAGAAAATGTTTCTTGAACAACCATTTTTGACAACATTTAGACACGCGCACACGTGTCAAAATCTGAGTGGTCTAGTTGAAAAAATTAAATGAAAATGGACCACTCAGATTTTGACACGTGTGCGCGTGTCTAAATGTTGTCAAAAATGGTTGTTCAAGTATCATTACCCTTTTTTGTTTTCATAAACTCTTCCTTAAGCTATATTAAGAATTCATAAATATAAATTATCATATTCTTTTAAAAAAAAAAACACATTGTGATGATTAGAATTTTCTTTTTTAAGCACAACTCTTTGTGAAATCCAAAATTCAATGCACAACTATTTCGAGTATTAATTTTAACGAAAATATTTTTTTAATAATTTTTTTTTATAACCTTTTATAATAATATAGGTGATAGTTTTGATTGGTCTGTTTTAAATATAAAAATCAATAAAATAATATTATAAAAAATATAAAAATTGTTAAAAAAATTATTAATGGTCTTAGCTTAATGAACGTACGACCATAAGATATACTTTGTGACAGACATCTTGGTACTATGATAATTTTTCTTAGATATTCGTGTGCATCTAACACCGACACCTTTGTCATCTACAAAATTCCACGCCAACTAACACGTCCAACCCAACTACCATGTGTTCAACTACCACTTTCCACTCTCTTTTTCTTCATACCCTCTTCTCTTTTTTTCTTCTTCTTCTTCATTTCTATGTACCCTTTCACTCTCCTATGAATTTACACCCTCCTATATATTAATACCGCCGAATCGTTTCTTGTTCTATACACTCTTCTTTTTCAAAACATATTCAATAAAGGTTTTCAAAGCTCTTTTCAACTTGCTGTTGCAAA


Gene Sequence:
>Vu_25866(+)
ATGGCTGACATTGATCGCTCATCTGATAATGCTTCTGCTGATTCTAAAGGTACCCTTTAAGAACGGAGTCTTCTGATACCTAGACAAGTATATTTTGACATAATTATACTATAACATGAACATACGTACTGATAACTAATCTCTCTGCAGTTTTATCTCAACGCTTGTTTTGGGTCATCATCCTTGTATGCCATTACATTTCTCAAATTTTGAATACTGACAACTGATCTCTCTGCAGAATCCTATTCTCGTTGCATTCTTTTTCTTTTTTGTGACCACCTGAGATTTCCAGCTTCTAGTCTTAATGTGTGATAACTTTTGATATATTGAAAACACAAAGTTGTTCATTGCATTAGTTTTAGTAACTAAAACTATTTAATAACAAGGTATATATGATCTTACATTATGTGATATGTGTCTATCTGCATTAGAAAAGTTGTTGTTTTCTTTATAAATTTGAAGAGTTGATTTGTGTTATGCAGAGAAATCCCTACAAACTTCGACTATGGAATTTTCTGAGGCTGAGGAAATCCTTATTGCCATGGTGTATAATCTGGTTGGGGAGAGGTGAGTATATGCATGCTTTCTTTTGTTGAACCACTTTTTTTTTTTTTTTCATTTTAGATGAAAGTTATATATGAAACATTAAGTTTTTCCTTAGGTGGTCTTTGATTGCTGGAAGAATTCCTGGAAGAACTGCAGAAGAGATAGAGAAGTATTGGACTTCAAGATATTCAACTAGCCAATGA