Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_26611 LG7 9537577 9538557 PREDICTED: transcription factor bHLH30-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, root development, cellular response to phosphate starvation, cellular response to phosphate starvation, regulation of transcription, DNA-templated, anthocyanin-containing compound biosynthetic process, root hair cell development, regulation of transcription, DNA-templated, root hair cell development, cellular response to phosphate starvation, regulation of transcription, DNA-templated, root hair cell development, anthocyanin-containing compound biosynthetic process, cellular response to phosphate starvation, root development, root hair cell development
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, protein dimerization activity, DNA-binding transcription factor activity, protein binding, protein binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/G 9537761 missense_variant p.Val173Ala
G/A 9537778 synonymous_variant p.Arg167Arg
C/T 9537833 missense_variant p.Gly149Asp
C/G 9537969 missense_variant p.Val104Leu
C/T 9538110 intron_variant
G/A 9538249 intron_variant
A/G 9538252 intron_variant
G/T 9538347 missense_variant p.Leu71Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_26611.1
MLPFRRFYGFQSWLDHDSTHVPNTFIKRSVEFDGARSKADRKSTEACKSHREAERRRRQRINSHLSTLRSLLPNAAKSDKASLLAEVVEHVKRLKKQAAEVACVDGGEPGAVRSEAWPLPGECDEATVSWCEGEANRVKATVCCEDRAGLNRDVTRAIRSVQAKPVRAEMMTVGGRMKSVVVVEWGEEEVEVGALERALKAVVENRALVGFGMGPIVLGQKRGRDCCGSPTSS*


CDS Sequence:
>Vu_26611.1
ATGCTTCCCTTCCGGAGATTCTACGGCTTCCAGAGTTGGCTAGACCACGACTCTACCCACGTCCCCAACACTTTCATTAAACGGTCAGTGGAGTTCGACGGCGCCAGATCAAAAGCCGACCGCAAATCAACGGAAGCATGCAAGAGTCACAGGGAAGCCGAGAGGAGACGCAGGCAGAGAATCAACTCTCACCTATCCACCTTACGATCCCTCCTTCCTAACGCCGCCAAGTCGGATAAAGCGTCGTTGCTGGCGGAAGTTGTTGAGCACGTGAAACGGTTAAAGAAGCAGGCCGCTGAAGTGGCGTGCGTGGACGGCGGCGAACCAGGTGCGGTTCGGTCTGAGGCGTGGCCGCTTCCCGGGGAGTGCGACGAGGCGACGGTGAGTTGGTGCGAGGGGGAGGCGAATAGGGTAAAGGCGACGGTGTGCTGTGAGGACCGGGCCGGTCTGAACCGCGACGTGACACGGGCAATCCGGTCGGTTCAGGCAAAGCCGGTTCGCGCGGAAATGATGACGGTTGGGGGAAGGATGAAGAGTGTGGTGGTGGTGGAGTGGGGTGAAGAGGAGGTGGAGGTTGGGGCGCTGGAACGGGCTTTGAAGGCCGTAGTGGAGAATCGGGCTTTGGTGGGCTTTGGAATGGGCCCTATTGTTTTGGGCCAGAAACGGGGTAGGGATTGTTGCGGTTCGCCTACTTCTTCTTGA


Promoter Sequence:
>Vu_26611::LG7:9538557-9540557(-)
GAAATAAAACATATTTAAGTCATTAATAAATTAGGTGAGGATATATAGCTTAGGTGTGTATGATGTGGCTTCTGCAGGCTGCTGGTTGGGGGATGCCATCTAAAGTCTCATCTGCTCCTTGCAGCCCGAGCACTGACATGGGATGTTGATCTTTCCTTCTCCATTGTTACCTTGGTGGGGCCCACCCGACATATTCACATGCATAATGTTACTGATAGATACATTCATACATAATTCATATTCATATTCTTTTTATCTATTTACTGTCACGAAAAGTAACCTAAACTGCTATACTAGCTACAAGGAAGGAATGTAGTAAGGTAAACCAATAGGTGGAGGAATAAAGAATATGCATGTCAGTGAATAATGGAGTGTCTCAATAATTAATGTGTCCATCCAACTTTATCTATTCTACTCTGACCTAATTAGGGCATCAGGAAAGGTATATATTAATGGCAAAACTGATCACAACATTTTTAGAAGCATATATAATATATTCCTTATCAACATCTTGTGGAATACAAGAAAACTTTGTTTCTGTTATGTCAAGTGTGTTTAGTTCAGAATATCTATGTTAATTTTCTGTTACTTATTTGAAGAGGTTAACACATTTAAGCAACCAGTTAAGTTGGAAAAAAGAGAAAGGAAACTATAGATAGATAATTATAAATGTAATGAGTAACATAGCAAATAAAGTAGAATGAGATAGAAAAACCACGTAGGTGATTATAATTATTCTCTTCTAAAAGATATATCAGTAAGTATTACATCATGCACAAGAAATGAAACTATTACGACAAAACAAGAAGCTACGAACCTATGGAAAAACATTCAATGCATGAAACAAAAAGTAAAGGAGTAACAAGGGCTAATAAATGAGGTGGTTATACGAGGTTTTAAAAGTGATTAGTCTAAAGATTATGTTAATAAAGGATATAGGAATTAATGTTAAGAGGGACAAAAAGGGGTGTGTGAAAGGGAAACGTTGAGTATATCAACGATGGTGCACAAACAGTATAGAGAATACAAGAAGTGATCAAATCCAAGAAGTAAAAGAGGTTGTTGTCGGATAAGCACATCGCTGTCTGGTTTTTGATTCCCCTGAGAAATTGGTGTCGGCGCCGGCTGCAGTAGTATACGTATGAGAGTATTAAGTAACAGTTGTTTTCCCCTTTGAAAATGATTGCATACCCTTCTTTTCCTTTTTCCACCAAACACACCATTATTTCCACCCTTCAACCCTCACCAACATATTACCACATTTCTCCTCTCACTATCCTTTTCTCCCCACTTTTTCCAACATTATAGTTGTAATCAACTCTTCTACTTCTTATTCCCTTACCCTTTTATTCCCCTTTTCCATGCATCATTAATATATACATACATTACCATCCATAAACTTTTAAGACAAACATTGATTTTTACCGTATACACATATTAGGATGCAGAAGGTGTGAAAGCACAGGCTAGGACGAAAACTACAGTGAAATTGATTTGAAAGGCATAGAAAAAGCCATGAGTTTTGAAAATTAATTGTCTGAATAAGAAAAGAGAAAATAAGTGATTTAATTTCTGAAGAAAGTGTCTCCCGTTGTAGACAAATGTACAGGCACTAATTTATTCTCTGGTCTCTCAAAGGTCACGATCTTTCTCACTTCTCATTTCCATTCCATCTTCTACCTCGGGCAACACAACACATTATATTTTATTTATTTATTTAGCAACAAAATAAAAATGTACCATTGTGTTTCTTTGGTAGGATCCCATTCTTCCACAACAGTTCAAACTTTGCTCCCTCATTCCTCACCCGACTGCCTCTCACGTACACAATACGCACACACTAATTTCTACCTAAAAAGCTGCCCAACAATACACCGTACCTAAACCACCACAACGACAACGGACACTTCACACATCATCGTTACATCACCCTCTCCCCACTCCTTAAACCTCTTCATTCTCCACACACCAACAACATTATTCATTACAAACAAAAAAAC


Gene Sequence:
>Vu_26611(-)
ATGCTTCCCTTCCGGAGATTCTACGGCTTCCAGAGTTGGCTAGACCACGACTCTACCCACGTCCCCAACACTTTCATTAAACGGTCAGTGGAGTTCGACGGCGCCAGATCAAAAGCCGACCGCAAATCAACGGAAGCATGCAAGAGTCACAGGGAAGCCGAGAGGAGACGCAGGCAGAGAATCAACTCTCACCTATCCACCTTACGATCCCTCCTTCCTAACGCCGCCAAGGTTATCTACAAAAAAAATATGTTCATTAATTATTATACGACAACGAAACTCACTCACACGTTTCTCTACAAGAATTTCCAAAATAAAACTTTTACAAAATAAGCTTAGTAATTAATTTGTATATTTTTTTATATATCTTATCATTCTTTGTGTATAATATCTTATTTTTTTATATATATTTCATTATAAATGAACGCCCTTCTGAAAAACTGTTCAGTTGGTGTGAATTTAGTTTCTGCATGGTTGGAGAGTAATGTAGTAAATTCTGACTTTTTTTAGTCGGATAAAGCGTCGTTGCTGGCGGAAGTTGTTGAGCACGTGAAACGGTTAAAGAAGCAGGCCGCTGAAGTGGCGTGCGTGGACGGCGGCGAACCAGGTGCGGTTCGGTCTGAGGCGTGGCCGCTTCCCGGGGAGTGCGACGAGGCGACGGTGAGTTGGTGCGAGGGGGAGGCGAATAGGGTAAAGGCGACGGTGTGCTGTGAGGACCGGGCCGGTCTGAACCGCGACGTGACACGGGCAATCCGGTCGGTTCAGGCAAAGCCGGTTCGCGCGGAAATGATGACGGTTGGGGGAAGGATGAAGAGTGTGGTGGTGGTGGAGTGGGGTGAAGAGGAGGTGGAGGTTGGGGCGCTGGAACGGGCTTTGAAGGCCGTAGTGGAGAATCGGGCTTTGGTGGGCTTTGGAATGGGCCCTATTGTTTTGGGCCAGAAACGGGGTAGGGATTGTTGCGGTTCGCCTACTTCTTCTTGA