Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28346 LG8 3922537 3925295 PREDICTED: serine/threonine-protein kinase-like protein CCR1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   tissue development, isoprenoid biosynthetic process, monocarboxylic acid metabolic process, organic acid biosynthetic process, monocarboxylic acid metabolic process, protein phosphorylation, organic acid biosynthetic process, isoprenoid biosynthetic process, isoprenoid biosynthetic process, organic acid biosynthetic process, isoprenoid biosynthetic process, protein phosphorylation, organic hydroxy compound biosynthetic process, protein phosphorylation, organic hydroxy compound biosynthetic process
Molecular Function   enables   protein serine/threonine kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein kinase activity, protein kinase activity, protein homodimerization activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
A/G 3922546 5_prime_UTR_variant
C/G 3923012 synonymous_variant p.Leu80Leu
C/T 3923420 synonymous_variant p.Gly216Gly
T/C 3923595 synonymous_variant p.Leu275Leu
G/C 3923872 missense_variant p.Cys367Ser
C/A 3923876 synonymous_variant p.Gly368Gly
C/A 3923878 stop_gained p.Ser369*
A/G 3923879 synonymous_variant p.Ser369Ser
T/A 3924204 missense_variant p.Ser478Thr
G/T 3924600 missense_variant p.Gly610Trp
C/T 3924603 missense_variant p.Leu611Phe
T/C 3924611 synonymous_variant p.Tyr613Tyr
G/A 3924620 synonymous_variant p.Lys616Lys
T/A 3924626 synonymous_variant p.Leu618Leu
G/T 3924627 missense_variant p.Val619Leu
C/T 3925054 3_prime_UTR_variant
C/G 3925092 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28346.1
MQNLPTLSLVLLFWCATAHGFGAMGPISASFAKDEVFCAIDASGKQDVICWGNNATSPSLPSVTNAVPSMSALSGGEGFLCGILANTSQAFCWGAVTKPSTDLVLVPPAYRNTAYSHIAAGKSHVCAVRGSYYSDHDSGSVDCWEITTTANKTLTAKQSDLYFNQAVMNLEVKRVVSGEGFTCGEVRDGGLICWGPNSGGIRVSNVSESFAVLAAGRRAVCGVFNVSGQLKCWGDPGSFSDPPLDSVRLVSLTAGANHFCGIRMDNHEVECWGDLNSSVIPRGNGFMALASSDLTTCGIREDDLLLDCWMVNALKADFDPPLELSSPGLCRASSCGVGEFAFNASMLNEVALTSLCVREDLRICSPCGSNCSKGFFLSSSCTKNADRVCTSCSLCQNSSCFSACGLHSPSGLHMHWHWHHLRKWMVIVGCSVLGVLTILLCGCLFSVRKKTKKQSKSGMGKPEQEDDHVNVALQSTPSVNSCPGAPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAMLADGRVVAVKRANAATIIHTNNRNFEMELEILCKIRHGNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKIAMQAAKGLEYLHKELVPPIVHKDLKSSNILLDSEWGARISDFGLLASSDKDLNGDLESDVYDFGIVILEILSGRKAYDRDYTPPNMVEWAVPLIKQGKAAATIDRYVALPRNVEPLLKLADIAELAVRENPSERPPMSDIASWLEQIVKDGLIL*


CDS Sequence:
>Vu_28346.1
ATGCAAAATCTCCCTACCCTTTCTCTCGTTCTCTTATTCTGGTGTGCCACTGCACATGGGTTCGGCGCCATGGGGCCAATATCTGCTTCATTCGCAAAAGACGAGGTTTTCTGCGCCATTGATGCTAGCGGGAAGCAAGACGTCATTTGCTGGGGGAACAACGCCACGTCACCGTCTCTGCCCTCCGTTACGAACGCCGTTCCTTCCATGTCAGCACTCTCCGGCGGGGAAGGCTTCCTCTGCGGCATTTTAGCGAACACCTCGCAAGCGTTCTGCTGGGGTGCTGTGACGAAACCCAGCACAGATCTCGTCCTCGTGCCGCCGGCGTACCGGAACACGGCTTATTCCCACATCGCCGCTGGCAAGAGCCATGTGTGCGCTGTTCGAGGATCCTACTACTCCGATCACGATTCGGGCTCCGTGGATTGCTGGGAAATCACGACGACCGCAAACAAAACGTTGACAGCGAAACAGAGTGACTTGTATTTCAACCAAGCCGTGATGAATCTGGAGGTGAAGAGGGTTGTTTCTGGGGAAGGGTTCACCTGCGGCGAGGTAAGAGACGGTGGACTCATATGTTGGGGACCTAACTCTGGAGGGATAAGAGTTTCCAATGTTTCCGAGAGTTTCGCGGTTTTAGCGGCTGGCCGGAGGGCCGTGTGCGGTGTTTTCAACGTTTCCGGCCAGTTGAAATGCTGGGGCGACCCGGGTTCGTTTTCGGATCCTCCACTGGATTCGGTTCGGCTGGTGTCCCTAACTGCTGGGGCTAACCATTTCTGCGGCATTAGAATGGATAACCATGAAGTGGAGTGTTGGGGAGATTTGAACTCTTCGGTGATTCCTCGAGGGAACGGTTTCATGGCACTTGCTTCTTCGGATTTAACCACGTGTGGGATCAGGGAAGATGATCTTCTTCTGGATTGTTGGATGGTGAATGCTTTGAAAGCCGATTTTGATCCTCCTTTGGAGCTTTCGAGCCCTGGACTGTGCAGGGCTAGTTCCTGTGGGGTCGGTGAGTTTGCTTTCAATGCGAGTATGCTTAACGAGGTAGCTTTGACTAGCCTCTGTGTTAGAGAGGATTTGAGGATTTGTTCACCTTGTGGCTCAAATTGTTCTAAAGGGTTCTTCTTGTCAAGTTCATGTACTAAAAATGCTGACAGAGTCTGCACCTCTTGTTCTCTTTGTCAGAACAGCTCTTGTTTTAGTGCCTGTGGACTTCATTCCCCATCAGGTCTGCATATGCATTGGCACTGGCATCATTTGCGTAAATGGATGGTTATAGTTGGGTGCTCAGTGTTGGGGGTTTTGACAATTTTGCTTTGTGGGTGTCTCTTTTCGGTCAGAAAGAAGACAAAGAAACAATCCAAGTCTGGCATGGGGAAACCAGAGCAAGAGGATGACCATGTCAATGTTGCTCTTCAATCAACACCTTCTGTTAATTCTTGTCCCGGGGCTCCTCAGGTTTTCAGGCTTTCTGAACTGAAGGATGCTACCAATGGGTTTAAGGAGTTTAATGAACTTGGGAGAGGAAGTTATGGGTTTGTGTACAAAGCCATGTTGGCAGATGGGAGAGTGGTTGCTGTTAAAAGAGCAAATGCTGCTACCATAATCCACACCAATAATCGTAATTTTGAAATGGAACTAGAAATTCTCTGCAAAATTCGCCATGGTAATATCGTTAATCTGTTGGGGTACTGCGCGGAGATGGGGGAGAGGTTGCTTGTTTACGAGTATATGCCTCATGGAACGCTTTATGATCACCTCCATGGTGGTCTTTCTCCGCTTAATTGGAGCCTCAGATTGAAGATAGCGATGCAAGCTGCGAAGGGGCTTGAGTATCTTCACAAGGAACTTGTGCCTCCAATTGTGCATAAGGATCTAAAAAGTTCGAACATTCTTTTGGATTCGGAGTGGGGAGCAAGGATTTCGGACTTTGGACTTCTTGCTTCGAGTGACAAAGATTTGAATGGAGACTTAGAAAGCGATGTTTACGATTTTGGGATTGTGATACTAGAGATTCTGAGTGGAAGAAAGGCTTATGACAGAGATTACACTCCACCCAACATGGTTGAGTGGGCAGTGCCTTTGATTAAACAAGGGAAGGCTGCTGCTACAATTGATAGGTATGTGGCTCTTCCAAGAAACGTTGAACCTTTGCTTAAGCTTGCTGATATAGCAGAACTTGCAGTGAGAGAGAATCCAAGTGAACGACCACCTATGTCAGACATAGCATCTTGGTTGGAGCAAATTGTGAAGGACGGATTGATCTTATAA


Promoter Sequence:
>Vu_28346::LG8:3920537-3922537(+)
GATATATTTCTTTTCTCTCCAACATGGTAATATATAAACATGATATAAGTATTCTAATTTATGACTTTGTTTCTTAAGCAGGTTTTCTGGTGATTTGTTAAATCTTATATTAAAAATAAGTGTACTCAGTAAGGAAGAGATTATAATTCCTAGATATAAAGAGAATACAGCAGTCACATAGTTTCAACTCAGGATAAAAGAAATGATACTTCTGATATACAGTTACTGCTTCGAGCATGGTAATTTTTACATGTTTGTTTAGTAATTTTTATCTTTGGGTATAGAAGGGTTTTCACTTTCGTATAAAGTTCTAGCATGAGAGAAATGTAATTAAATAATGGTTTATCCAACTAATTTCGTAGAAGACAAAATACTTTAGAAATTCACATGAGAAAGAAGAAAAGAGTGACAGAAAGAAACCCAATTGAGAAGGCTATGATATGATGTTTGGTGCTTTTCTTCTGATCACAATTCGCTAAAACCAAATGAGATGAGTTTTGCACGATCATACTGTTTTAACTTTACACGCAGGTTTCGAAAAGGAGGGGTAAGCATTAAGAATCTCCCATCCTTTATTTATTTCTTTTCTATTATTATAATAAATTTGCTTTCCAATGTTTTAATTATAAGTACCTTTTTCTACCGAAACAGTTTCATATTTTCAGCATAAATAAGATAAAATTTCTAAAACAGTAAGTGTAAATGAAGAAAAACCCTGCTTTGAGTATTTTATTAAAAGGCATAAAAAAAAGTAGCACTTATTATACATTGTTAGTGAAGTTGTTGGTATCATCTTTTAAGTTGATTGCCCCAAACGCATTGAAGTGGAGAATTACGTGAAAAGTTGGGGATAATTGAGTTGAGTTACGTAACAACAACTTACTAGTGTCTTGAACTTGTCTTATATGATATTTTAACATAAATAATAAGTGGAAGTATATAAAAAATATTCTACATAAAAAATCAAATTAAAATAATGAGAAATGATTTAATTTGAAGTTGAAGACAGTGATATTAAATATTGAATTTGTTTGTGATGAATTTGGAAGGTGACTGTTTTGTTTTGTTGATTCAATTGGACAGACGAAATGACCCATCTTGGTGCCTACAAATAAAATCTCTTTTAGATTGTAGACCCACGCCAAACCCACCTCATTGGGACAAAATCCATATTTTATCATTAACCTTTTCTAAGAATCCCATGTTTCTAAACAAAACCCACCAACATGATTCTCCATAATTACTACATTATTTATTTCTTAACTATGATTCTTAAATAAACTTTGATTCTTTATATATATATATATATATATATATATATATATATATATATAAGTGTTTCTAATTTAAGTTTAGAGTCTAGTAATTTTATAAACCAATATTGTGATAGTTAAAAGATACTGTTTAGCATGTTCAGATATTTGGATTGGTTTATATAAACTGGTCACTCAATTTTATGAAAAAATTCTATAATTTTGTTGTTAAATTCAATTCAGAAGACACATATAATTTTGTAATATTTAAATAGTTTAATGTTTTAAAATATACTTTTAGTTAATGAAATAATGGAATACAAGAAATAATAATTCTATTATCATTAGTTCTACTCAATTGTTTATTTAATAGAATAATAAGATAGATTCAAAAGTAATTATGGTAATGTTAACATTACTACTTAAGAACTATTAAATGGGAAATTCTGTTAAATTTTAATAGACTAGATTTCACCCGCACACAGGAAAATCTAATTCAATCTATTTATCCGAAATAGTCAACATGTAGAAACATTTATTAAAAGTAATTCTTAATTTAAAAAATAAAATAAAACTTAGTCAACTGTGAAGTTTACACATATCTACTTAAAGTCAAACATACTTTTTAAGAATGCCTTTTAAGTTTAAACTTTGCAGATGCACCGGTGGTGAGTGGTGAATTAATTCTTGCTCTTGGAACATTGTCATTAATATCAGAATAAAAAACTGGTTTTTAATTTGATGGGA


Gene Sequence:
>Vu_28346(+)
AACAATGACATTGGAAGAAAGATGAAAGTAAGTAAACAATGTGATAATGGGAGCTGTAAAAATGGCGACAGCCACGTTGTTTCATCGTCATCACCTATCACACTCTCACTCTCAAGGTTCTTACTTCAGCAAGAATAGCAAACACAAACAGCATCACCATCTTTATCGTCACGATCTCAAACAACAACAACAACTCTTCGCAGAGTCCATGACACTCTTCCCAACCCAACCCAGCCATGCAAAATCTCCCTACCCTTTCTCTCGTTCTCTTATTCTGGTGTGCCACTGCACATGGGTTCGGCGCCATGGGGCCAATATCTGCTTCATTCGCAAAAGACGAGGTTTTCTGCGCCATTGATGCTAGCGGGAAGCAAGACGTCATTTGCTGGGGGAACAACGCCACGTCACCGTCTCTGCCCTCCGTTACGAACGCCGTTCCTTCCATGTCAGCACTCTCCGGCGGGGAAGGCTTCCTCTGCGGCATTTTAGCGAACACCTCGCAAGCGTTCTGCTGGGGTGCTGTGACGAAACCCAGCACAGATCTCGTCCTCGTGCCGCCGGCGTACCGGAACACGGCTTATTCCCACATCGCCGCTGGCAAGAGCCATGTGTGCGCTGTTCGAGGATCCTACTACTCCGATCACGATTCGGGCTCCGTGGATTGCTGGGAAATCACGACGACCGCAAACAAAACGTTGACAGCGAAACAGAGTGACTTGTATTTCAACCAAGCCGTGATGAATCTGGAGGTGAAGAGGGTTGTTTCTGGGGAAGGGTTCACCTGCGGCGAGGTAAGAGACGGTGGACTCATATGTTGGGGACCTAACTCTGGAGGGATAAGAGTTTCCAATGTTTCCGAGAGTTTCGCGGTTTTAGCGGCTGGCCGGAGGGCCGTGTGCGGTGTTTTCAACGTTTCCGGCCAGTTGAAATGCTGGGGCGACCCGGGTTCGTTTTCGGATCCTCCACTGGATTCGGTTCGGCTGGTGTCCCTAACTGCTGGGGCTAACCATTTCTGCGGCATTAGAATGGATAACCATGAAGTGGAGTGTTGGGGAGATTTGAACTCTTCGGTGATTCCTCGAGGGAACGGTTTCATGGCACTTGCTTCTTCGGATTTAACCACGTGTGGGATCAGGGAAGATGATCTTCTTCTGGATTGTTGGATGGTGAATGCTTTGAAAGCCGATTTTGATCCTCCTTTGGAGCTTTCGAGCCCTGGACTGTGCAGGGCTAGTTCCTGTGGGGTCGGTGAGTTTGCTTTCAATGCGAGTATGCTTAACGAGGTAGCTTTGACTAGCCTCTGTGTTAGAGAGGATTTGAGGATTTGTTCACCTTGTGGCTCAAATTGTTCTAAAGGGTTCTTCTTGTCAAGTTCATGTACTAAAAATGCTGACAGAGTCTGCACCTCTTGTTCTCTTTGTCAGAACAGCTCTTGTTTTAGTGCCTGTGGACTTCATTCCCCATCAGGTCTGCATATGCATTGGCACTGGCATCATTTGCGTAAATGGATGGTTATAGTTGGGTGCTCAGTGTTGGGGGTTTTGACAATTTTGCTTTGTGGGTGTCTCTTTTCGGTCAGAAAGAAGACAAAGAAACAATCCAAGTCTGGCATGGGGAAACCAGAGCAAGAGGATGACCATGTCAATGTTGCTCTTCAATCAACACCTTCTGTTAATTCTTGTCCCGGGGCTCCTCAGGTTTTCAGGCTTTCTGAACTGAAGGATGCTACCAATGGGTTTAAGGAGTTTAATGAACTTGGGAGAGGAAGTTATGGGTTTGTGTACAAAGCCATGTTGGCAGATGGGAGAGTGGTTGCTGTTAAAAGAGCAAATGCTGCTACCATAATCCACACCAATAATCGTAATTTTGAAATGGAACTAGAAATTCTCTGCAAAATTCGCCATGGTAATATCGTTAATCTGTTGGGGTACTGCGCGGAGATGGGGGAGAGGTTGCTTGTTTACGAGTATATGCCTCATGGAACGCTTTATGATCACCTCCATGGTGGTCTTTCTCCGCTTAATTGGAGCCTCAGATTGAAGATAGCGATGCAAGCTGCGAAGGGGCTTGAGTATCTTCACAAGGAACTTGTGCCTCCAATTGTGCATAAGGATCTAAAAAGTTCGAACATTCTTTTGGATTCGGAGTGGGGAGCAAGGATTTCGGACTTTGGACTTCTTGCTTCGAGTGACAAAGATTTGAATGGAGACTTAGAAAGCGATGTTTACGATTTTGGGATTGTGATACTAGAGATTCTGAGTGGAAGAAAGGCTTATGACAGAGATTACACTCCACCCAACATGGTTGAGTGGGCAGTGCCTTTGATTAAACAAGGGAAGGCTGCTGCTACAATTGATAGGTATGTGGCTCTTCCAAGAAACGTTGAACCTTTGCTTAAGCTTGCTGATATAGCAGAACTTGCAGTGAGAGAGAATCCAAGTGAACGACCACCTATGTCAGACATAGCATCTTGGTTGGAGCAAATTGTGAAGGACGGATTGATCTTATAACATTAGCCACCGCCCTGTGAGAAATTTGTTTGAGTTTTGATCCATCCACAGTATCTTTCATAAGATTATGTGAGTAATTCCCTTTTGCCAATGTAAATTGTTTTTGAGTTTGTTGTAGATCGCCTATCTCTTTTGTAGTTCTTTGAGTTTTCTTTTCCTAATCTTCACGAAGTGAAGGACATGGCATTATTTCATCATACACGATTGTTTTTCTCTGTACATGCTAATGTGAAATGTTTTTTACTTCTC