Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_28580 LG8 9593969 9595920 PREDICTED: B3 domain-containing protein At2g36080-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   negative regulation of transcription, DNA-templated, leaf development, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, leaf development, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, leaf shaping, meristem maintenance, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, leaf shaping, negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/G 9593972 synonymous_variant p.Leu341Leu
C/A 9594344 intron_variant
C/G 9594417 intron_variant
T/C 9594554 intron_variant
T/A 9594655 intron_variant
C/A 9594676 intron_variant
T/C 9594690 intron_variant
C/T 9594692 intron_variant
G/A 9594752 intron_variant
C/G 9594952 intron_variant
C/A 9595578 missense_variant p.Gly115Cys
G/A 9595764 missense_variant p.His53Tyr
G/A 9595783 synonymous_variant p.Pro46Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_28580.1
MSINHYSMDLPETTLWWPQQQHHQQQSILMEATPNPSSTSWPSADPPGLNLNHQNDDVEEDEEEEDQTTTTTQQEETEDEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGGGGGDSGECKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRADAHRLFIGWRRRRHGDTSPVHVSGRAVGHGKSGDGSSKNEGGGTTGVGLGWTRGFYSAHPYPTHQQQLHNHQPLPYQYDCLHAGRGSQGQRERSIAEGNSPSSSSSSRVLRLFGVNMECQTEHDSGPSTPQSSYNTTNMPSTQGTQNHHHFYHRHQPYYYY*


CDS Sequence:
>Vu_28580.1
ATGTCGATAAACCACTACTCCATGGACCTTCCCGAAACAACACTGTGGTGGCCCCAACAACAGCATCATCAGCAGCAATCCATCTTAATGGAAGCAACCCCGAATCCCTCCTCCACTTCCTGGCCCTCCGCAGACCCCCCGGGTCTCAACCTCAACCACCAAAACGACGACGTCGAAGAAGACGAAGAAGAAGAGGACCAAACAACAACCACTACACAGCAAGAGGAAACGGAAGACGAGAAGGAACCCATGTTCGAGAAGCCTCTAACTCCCAGCGACGTGGGGAAGCTCAACCGCCTCGTAATCCCCAAGCAGCACGCCGAGAAGTACTTCCCTCTCAGCGGTGGCGGTGGCGGCGACTCGGGCGAGTGCAAGGGGCTCCTATTGAGTTTCGAGGACGAGTCGGGTAAGTGCTGGCGGTTTCGCTACTCCTACTGGAACAGCAGCCAGAGCTACGTGCTCACCAAAGGGTGGAGCCGCTACGTCAAGGACAAGCGCCTCGACGCCGGCGACGTTGTCTTGTTCGAGCGCCACCGCGCCGATGCCCACCGCCTATTCATCGGATGGAGACGCCGGCGACACGGCGACACATCGCCGGTGCACGTTAGCGGCAGGGCGGTGGGGCACGGGAAGAGTGGCGACGGGAGTAGTAAGAATGAGGGTGGCGGCACCACTGGTGTTGGTTTGGGATGGACCAGAGGATTCTATTCTGCGCATCCTTATCCTACGCATCAGCAGCAGCTGCATAATCATCAACCCTTGCCATACCAATATGACTGTCTTCATGCAGGAAGAGGGTCCCAAGGTCAGAGAGAAAGGAGCATAGCAGAGGGGAACAGTCCCAGTTCAAGTTCGAGTTCAAGGGTACTTAGGCTTTTTGGGGTGAACATGGAATGCCAAACCGAACATGATTCTGGACCCTCCACACCCCAATCTTCCTACAATACTACCAACATGCCCTCCACACAGGGCACACAAAACCATCACCATTTCTACCATCGTCACCAACCATACTACTACTATTAG


Promoter Sequence:
>Vu_28580::LG8:9595920-9597920(-)
TTTTGTCTTGAAGTCATGGAAAAGACGCAATCTAACCAAAGAAGCCAATAAATATGATGCAATAGAAGCATATTTTAATAGAAGGGTGCATTGGGTAGACAGCCAAGGGACCGTATGAGTAAACAAATAGAGAGATTCAAGTGTGAGGAGGGGATTCAAACACCGTTACACAAACACCCTTTTTCTGTCTTCTCTCATTGGACAAATCTTATCTCATCGTCTTCCTTCATTGGGAACCTAATGCATCCATCCCTTTTCTTTTTTTTTTTCTGCTTATCTTCCCTCACAAATTCATTTTCATAATTTCCTATCATTCAAACACTAGGAGTGGCCAAACACAAATAATTCACTCTTCCACGTGATGCAAATACTATTCTTTCTCATCTCAACATATATAATGCCACATTTTTTAGATACCTCAATCAATTGCACCTATATCTGCGCACACACATGCCCCTCATAAACATACAAAAACCAAAAACATGGACCACTCTCTTATTTTCCCCTCTCAATCATCAAATGGCCACCCTTTCATCCATCTCAACCACGAAATATCAACTCATTGGACACTCATTTTAAAATCAACCCTTTTCACCTCTTACGTTTTTTTACCTCACCCAAATTATCACCTTCGTTCATTCCTCAAAACCAACAAAAATTTATATTTAAACCAAGACCATCTTCAATTCCATCTCTCTTTTCTTTTACTCATTGCATTATGTAATCTTTTTACTGACACAAAAACTGGTAAACAAACAAGGTCGTATATATGTAGGTATATTTCTATATATGACAGTAACAATTCATTCCATGCTGCTTAAAGTAGCTCCTGGAAAACTACACCGGAACTGTTGTGATTTTTGCGAAAAAATTGCTGCCTTTTTAGTGTCCCTTTATCATGATTTCAATTAAGAAGCGTGTTGTTACTAGTTTTTTAATAATGGATAGTTTTACGTCAGTCATAAACTGGTAATGAAATAAAGTCAACAGTGTTGAATAAAAGTGAAAATGAAATTGGTTGTGGAAATAATAAAATGAGTAAAAGGGTAATAGGTGAACTAGGCCGGCATGGGATTGAGAAAAGAAGAAGCATCGGAGAGTGAGGGAGCATATTGAGATTATGATGATTACTTAGTCCGGGAATGAAGAAGAAGAAGGGACCCATCTTTTTTTTATACTTGATTTGTTTGCCAATTTAGTAACATGGGATGTCCCTAATTCCACCAAATTACTTTCCTCTACAATCTATCTTTCTTTCTCACCTTTCATAGACATAAATGTTCGCCCCAATTCAGTAATAATTCACTTTTTTAATAATCTCACTATGTCTCACGGACTATTATATATTTCTATCAACTTATTCATCCCTCGTTACCATATATTTTATAATTACACAGACAATTTTACAGAGTCATTATTCATTAATATTTAATTAGAGTGGAAACCAGAAAAAAAAAAACGACTAAAAATAGTTGTCGAGGATATTAAGTATTTAATAGAAAATAAGTTATCATTGTCGATCCTTCGTCGGATATTGTAATGTACTTTCTGAATTAAAAAAATGTGATGTACTTTTTCGATGTAGTAACGCGTTTCGCACGTAACTTGAATCAATAAGTATTACGTGTATGGCGGGGTATTTTTAGATTTTGCTAAAATATAAAGAGTAATTCAAAAACTAAACAGAAACATGTGTCTCTGTTTTTCTCGAATTATTGTATATTTAATGTTAAAAAAATGAAAAGAAAACTAAAATGGTGGCAGATAATATTTTCTTTTTCTTTCTCTCTCTTTGTCATATCTTGCTCCATCAAATAGTTCCCACAGTTCCCACATCAAACCACAATCATCACGCCTCTTTCAAAACCCTTCCTCTTTCTCTTTCTCTCATTCTTCATTCTGCTATCTGTACCCTCACAAAATCCTCAATTCCAAATCAACCTTTTCTCTCTCTTTCTCTCTCACATACACAGTGGAGAGAGAAGTGAACAACTTGGAAA


Gene Sequence:
>Vu_28580(-)
ATGTCGATAAACCACTACTCCATGGACCTTCCCGAAACAACACTGTGGTGGCCCCAACAACAGCATCATCAGCAGCAATCCATCTTAATGGAAGCAACCCCGAATCCCTCCTCCACTTCCTGGCCCTCCGCAGACCCCCCGGGTCTCAACCTCAACCACCAAAACGACGACGTCGAAGAAGACGAAGAAGAAGAGGACCAAACAACAACCACTACACAGCAAGAGGAAACGGAAGACGAGAAGGAACCCATGTTCGAGAAGCCTCTAACTCCCAGCGACGTGGGGAAGCTCAACCGCCTCGTAATCCCCAAGCAGCACGCCGAGAAGTACTTCCCTCTCAGCGGTGGCGGTGGCGGCGACTCGGGCGAGTGCAAGGGGCTCCTATTGAGTTTCGAGGACGAGTCGGGTAAGTGCTGGCGGTTTCGCTACTCCTACTGGAACAGCAGCCAGAGCTACGTGCTCACCAAAGGGTGGAGCCGCTACGTCAAGGACAAGCGCCTCGACGCCGGCGACGTTGTCTTGTTCGAGCGCCACCGCGCCGATGCCCACCGCCTATTCATCGGATGGAGACGCCGGCGACACGGCGACACATCGCCGGTGCACGTTAGCGGCAGGGCGGTGGGGCACGGGAAGAGTGGCGACGGGAGTAGTAAGAATGAGGGTGGCGGCACCACTGGTGTTGGTTTGGGATGGACCAGAGGATTCTATTCTGCGCATCCTTATCCTACGCATCAGCAGCAGCTGCATAATCATCAACCCTTGCCATACCAATATGACTGTCTTCATGCAGGTTGCTCTATCTCTTCAATCCAAATAAATAATTTATCTCTTTAATCTATTTTTCCTAAAAAGAATGGATAATTTTCCAAAAAACATTTATCATTGCCTTTTTCACTTTCACCTATTTTAGTTTTTTAAATACTTTTTCTCATCCCTTTTTCTGCCATTCAGGTTTTGTCTAACAAATAGTATAATAATATTTAAATTTTTTAAAAAAATGTAACACACTTTTTTATCCGCCATATACCACTTAGATTCTTCTTTAACCCAAAATTCTTACCTTATTTTAATAAATGGTAAACAACATTTAATACTTCATTAACATTGTTAAAAACAATCAAACATTTTACACTGAAACATAGAAAAAAAAGAAAGAGAGAGAGTAAAACAGCATCACAACTCCTGTGTTCTAGAAAGAATATAAATTGTAATTCATCTATCCTTTCATGAATAACACTGCCTTTGTTTTGGATTTCCTTGGGTACAATATCCTTTCAAAGAATTCCTTCTTTCACTGGATTTTTTTTTTTCTTTTCGGGTTTATTTTTCCTGTTTCGAACCGTACTTGCTTCTTTTTTTGTTGTAAAAAAAGAAAAAAAAAGGACAAGATGATGAAATAATTACATTCTTGTGGAAGTGCGTGAAGTTTACCTTCCAATTAATCGGGAGAAATGTGGTTTTATATTGGGATTTGCGAGGAGGCAAATAAGCTGTTTTAGATTGGCGAAACCCACGTGAAGCACACGCGCCGATTGTCGTTGAATAAATTTTATAAGGAAAAAAAAACAACCTTTTCGGCATAAGCTGGGAGGTTGAGAAAAACATGCGGTGGCGTTTAGTCTGTTAGTGGTGATGTTCATGGATGGTGTTTATTTTTGAATTGAATGGGTTAGTTTGATGAAGGTACTGAGAAATGCACGTGTTGCAATGTTACAGGAAGAGGGTCCCAAGGTCAGAGAGAAAGGAGCATAGCAGAGGGGAACAGTCCCAGTTCAAGTTCGAGTTCAAGGGTACTTAGGCTTTTTGGGGTGAACATGGAATGCCAAACCGAACATGATTCTGGACCCTCCACACCCCAATCTTCCTACAATACTACCAACATGCCCTCCACACAGGGCACACAAAACCATCACCATTTCTACCATCGTCACCAACCATACTACTACTATTAG