Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_28690	LG8	12870106	12870675	PREDICTED: protein RADIALIS-like 3	Map

Annotations

category		relationship type		keyword

SNP	Position	Effect
G/A	12870396	downstream_gene_variant
T/A	12870399	downstream_gene_variant
A/C	12870437	downstream_gene_variant
A/T	12870528	downstream_gene_variant
T/A	12870557	downstream_gene_variant
G/A	12870621	downstream_gene_variant
C/T	12870631	downstream_gene_variant

View accession wise SNPs

Sequence Details:

Protein Sequence:
>Vu_28690.1

MASSSMSATGSWSAKDNKAFERALAVYDKDTPDRWNNVALAVGGKTPDEVKRHYELLLRDITEIESGQVPFPNYKKTAESDEEGKRLKNMKLQ*

CDS Sequence:
>Vu_28690.1

Promoter Sequence:
>Vu_28690::LG8:12868106-12870106(+)

CTTAACCTATTAATTTAAATAATATAAACAAATTACAAGACTTCAACAACTAAATTCTTAATTCTTTAATGCATCTTTTGAATTTAAACATTCTTTTAAATCTTCAACACTTCTCCACAATCATCATCATAAAAACTCTTTATTGAAGCAAGATGTCTATCTTCTTCTTTTTTGAACAATTTAATATTATTCCCAATTGATGTAACCTTTTTAATATCACTTATTATTAGATAAAAATAAGTTGCCATATTTTATTTTTCTAATTCTTCTTTTATTTTTCAACTTTACCTTGTTTTGTCTTTTGTCGTTGACACCATGACCAAAAGTTTTCAATGTGATCATGAAGATTGTTTTGCATTAAAGCATTTAAGTTAACAAATCAAACATGCACATACATACACAAATATTGAGTTTAGTTTTTTTTTGTTTTACTTTTTAAAGTATATTATCTAGATAAAATTTGATGCAAATAATGAGTCAATTCATATAAAATATTACAACATCGTTTCTAATTTAAACTCGTAAGACATGTTTATGGGTTTTCATCTTTATATATCATTTAACTTTATTATTTCTAGTTAACATGTGATTCAAATTAAAACTTAAATTCTTGACATTATAAAATTATATTTTAATTATAAACTCAAACTGATTTTTGAATTCCTAACATATAAAAAAGAAGTTTACAAATCAAATCTTACTCTTTTCTATTTGTTTGATGTCATGTTCAAAATAACATGATCACACATTTGTGTTCTCTTCAAGATAGAATATCTAGGGTTGCCAATGTTGCGTATACTTGTGATCAATTAGGCTAAAAACAACTTAAGTTTAAACCTTGTATTCAAGTTCCACTTCCTTATTATAGTGAAGTTAAGTGATGGATCTTATGGTGCAACTTTTTTTATATCTTTTGTTCATGTGCAAGGCGAAAGTAGTACAATACACGTACGTACGAGAGAAATAGAAGTTCATTCGTGCTACCTTGCGACATATGTAGAATGGACTATAGTGGTTTTGGATGAAAATTACACATTAAAAGTACCCTTAATTTGAGTATATTATTCATTTTCAAATTATTGGTCAAAGTTTATCACGTAAAGTGTTAAATAAATCTCTTTTTTTTCATATACTTCGTGACTTCTTCCTTTCACGCTTAAAATACAATCACAACTGAAATTTACATTTACTCATTAACTAATGCTACAAGTTTGATCATGTCAATTGCTCCACCAATCAATATTAGTTTGAGTAATGTTAAACTTATTTCAATAGAATGCTCATCTATATTGTAACAACTTCTATTGTGTTTTTCAAGTCCTACATAATATTCTTGCTCACTTATTCAACCATACTATTCCATTTTTCATTCCAAGAAAAAACAAAATTCTAATTGCAATATTCTTCTCCAACTTTCAAGTATCAATGGTGGAATGAATGTTGTGGTGTGGCATGTTAGGAAAATACAAGAGGGCACGTCATAGTAACATACTCATGTGATACACAATTACAAGAGACACATCAACAATTAGAGTAATTGCAAAATTATCATAATTTACTTTGGTGCACGTATAAAATCATGTTACAAAAGCTGCAGCTGCAATGTCCTCAACCCTAATTCAGAAAGAAGGTTTAAACCTTTGAAGATACTTATTCTCCCATTACTCTTCAACTTCTTGGTCCTGCTCAATTCTGTGGTTCCTGATGAAACAAATCATTAAAATTCTGCTTGTTTTGGAAAATTTGCAAGAGAAGACAACTTGCACCTTGCATGGTCACACCCTCCATTTCTGCTTATAAAAGGAGCATGCATGGTGCTTCCTTTCTACACATATCATCAAGACTCTTCCTAGCACTATAGTGTAGAGTTTCTCAACCTTTCTTAATTAGTTCCATCTCTCTGTTGAAGTTGAGCACTACCATATACCAGTAGTTCACTACATTTGAAACCTTAGGCAATACTCTATATATATCTAGTTACCTTAACTAACTATCAGAAA

Gene Sequence:

>Vu_28690(+)

ATGGCATCAAGCTCAATGTCAGCTACAGGTTCATGGAGTGCTAAGGACAACAAGGCCTTTGAAAGGGCTCTAGCTGTTTATGACAAGGACACCCCTGACCGATGGAACAATGTTGCCCTTGCTGTTGGAGGGAAAACTCCTGATGAAGTGAAAAGGCACTATGAGCTACTCCTCAGAGACATTACTGAAATTGAATCAGGCCAAGTTCCATTCCCAAACTACAAGAAAACTGCTGAATCTGATGAAGAGGGGAAAAGGTACAACATTTTCCAACATCATTTATGCATTTAGAATTAAATTCAGTGTATATATTTGTGTTCCCAGAAACATGAAGCTACTTAAACAAGCGCAATCTCTGATTCTCTTTAAATCCAATATCCTTAGATGCACTTAAAGCTCGTCTCTGTGTTCATGGTTCTACCAAAAGTTAAAAAGTTACTGTCGAAATAGTTAATCATATATCTATCAACCCTGCAAATATTTCCTTTCTAACTTGCCTCATGAACTCTATTTTTGTGGTTAATTCTTGAAACTGTTACTTGCAGGCTGAAAAACATGAAGCTCCAGTGA