Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30189 LG8 34584007 34587243 PREDICTED: leucine-rich repeat receptor-like protein kinase PXL1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   procambium histogenesis, procambium histogenesis, procambium histogenesis, protein phosphorylation, phloem or xylem histogenesis, procambium histogenesis, protein phosphorylation, procambium histogenesis, phloem or xylem histogenesis, protein phosphorylation
Cellular Component   located in   plasma membrane
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, kinase activity, protein binding, protein binding, protein binding
SNP Position Effect Amino acid change
G/T 34584675 synonymous_variant p.Thr223Thr
T/G 34584738 missense_variant p.Asn244Lys
T/C 34584742 missense_variant p.Phe246Leu
T/A 34585138 missense_variant p.Ser378Thr
C/A 34585139 missense_variant p.Ser378Tyr
T/A 34585143 synonymous_variant p.Pro379Pro
C/A 34585499 missense_variant p.Pro498Gln
A/C 34585500 synonymous_variant p.Pro498Pro
T/A 34585671 missense_variant p.Asn555Lys
T/C 34585678 synonymous_variant p.Leu558Leu
T/A 34585878 synonymous_variant p.Leu624Leu
A/G 34585939 missense_variant p.Thr645Ala
A/G 34585941 synonymous_variant p.Thr645Thr
C/A 34586359 downstream_gene_variant
T/A 34586928 missense_variant p.Phe709Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30189.1
MQNATRLRGSNTKRATTKMQTHLLFFCCYIGLSLAFTEAAADGELSSLLSIKATLIDPMRHLKDWQIPSNVTQSGSPHCNWTGVGCNFKGYVESLDLSNMNLSGRVSDHVQSLSSLSYFNISCNNFASSLPKSLSNLTSLENFDVSQNYFTGSFPTGLGRAAGLRLINASSNDFSGFLPEDIGNATMLESLDFRGSYFVSPIPKSFKNLQKLKFLGLSGNNFTGRIPGYLGDLTSLETLIIGYNLFEGEIPAEFGNLITLQYLDLAVGSLSGQIPAELGKLTKLNTIYLYHNNFTGKIPPELGDVTSLAFLDLSDNQISGEIPEELAKLENLKLLNLMTNKLTGRVPEKLGELKNLQVLELWKNSLHGPLPPYLGQNSPLQWLDVSSNALSGDIPPGLCTTGNLTKLILFNNSFTGSIPSGLANCLSLVRVRIQNNLISGTIPVGFGNLLGLQRLEFAKNNLTGKIPSDITSSTSLSFIDVSWNNFESSLPSDILSIPTLQTFIASHNNFGGDIPDEFQDCPSLSVLDLSNTHISGTIPESIASCQKLVNLNLRNNHLTGKIPKSITSMPTLSVLDLSNNSLTGRIPDNIGNCPALELLNLSYNKLEGPVPSNGMLVTINPNDLIGNEGLCGGILPPCSPSMAVTSHRRSSHVRHIIIGFVAGISVILAFGAAYFGEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDPSFEESIDIVEWIRKKKSNKSLLEALDPAIASQCKHVQEEMLLVLRIALLCTAKLPKERPHMRDIITMLGEAKPRRKSVCHNGGQESSSMEKSIVLTTSPAISLL*


CDS Sequence:
>Vu_30189.1
ATGCAAAATGCAACAAGATTAAGAGGATCCAACACCAAGAGAGCAACCACCAAAATGCAAACCCACCTGCTGTTCTTCTGTTGTTACATTGGCCTCTCACTGGCTTTTACTGAAGCTGCAGCAGATGGTGAACTGTCAAGTCTTCTCTCAATCAAAGCCACTCTCATTGACCCAATGAGGCATCTGAAGGATTGGCAAATTCCAAGCAATGTGACACAATCAGGATCACCCCATTGTAACTGGACTGGAGTTGGTTGCAACTTTAAAGGCTATGTAGAGAGTCTTGACCTCTCCAACATGAACCTCAGCGGTCGTGTTTCGGACCACGTTCAATCTCTTTCAAGTCTGTCTTATTTCAACATAAGCTGTAACAACTTTGCTTCATCACTGCCCAAGTCACTGTCCAACCTCACCTCTCTCGAGAACTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTCCCCACTGGTCTTGGAAGAGCTGCAGGCTTGAGATTAATCAATGCATCGAGCAATGATTTTTCAGGTTTTCTTCCTGAGGATATTGGAAATGCAACCATGCTTGAGAGCCTTGATTTTCGAGGGAGCTACTTCGTGAGTCCAATCCCCAAGAGCTTTAAGAATTTGCAGAAACTCAAATTTCTGGGCCTTTCAGGCAATAACTTCACGGGGAGGATTCCAGGATATCTCGGTGATCTAACTTCTCTGGAGACATTGATTATCGGATACAATTTATTTGAAGGTGAGATCCCTGCAGAGTTTGGGAACCTGATCACTCTTCAATACCTTGACTTGGCTGTAGGAAGTCTCAGTGGACAAATTCCAGCTGAATTGGGTAAGCTGACAAAACTCAACACAATTTACTTGTACCATAACAACTTCACAGGAAAAATTCCTCCTGAACTTGGAGACGTAACTTCACTGGCATTTTTGGACCTCTCTGACAATCAGATCTCCGGAGAGATTCCGGAAGAACTTGCTAAATTGGAAAACCTGAAGCTCTTAAACCTGATGACGAACAAACTAACTGGACGAGTACCAGAGAAGCTTGGTGAATTGAAAAATTTACAGGTGCTTGAGCTCTGGAAAAATTCCTTACATGGTCCTTTGCCACCATACCTTGGGCAGAACTCTCCTTTACAGTGGTTGGATGTATCCTCTAACGCACTATCTGGGGATATCCCTCCAGGTTTGTGTACAACTGGAAATCTCACTAAATTAATCCTCTTCAATAATTCCTTCACTGGCTCCATTCCAAGTGGACTTGCGAACTGTTTGTCTTTGGTACGTGTTCGGATTCAGAACAATCTTATTTCTGGAACTATTCCAGTTGGCTTTGGAAACCTCCTTGGCCTTCAACGGCTAGAATTCGCAAAGAACAACCTCACTGGGAAAATTCCCTCTGATATTACCTCATCCACATCGCTCTCTTTCATTGATGTATCTTGGAACAACTTTGAGTCATCTCTTCCGTCAGATATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCATAACAATTTTGGAGGAGATATCCCAGATGAGTTCCAGGACTGTCCATCTCTCTCTGTATTGGACCTTTCAAACACTCATATTTCTGGCACAATCCCTGAAAGTATTGCTTCTTGTCAAAAATTAGTCAACCTTAACCTTCGAAATAACCACTTGACAGGAAAAATCCCAAAATCAATCACAAGCATGCCCACTTTATCTGTTCTTGATCTTTCCAACAACTCATTGACCGGTAGGATTCCTGACAACATTGGCAATTGCCCTGCTCTGGAATTGCTGAACTTGTCCTATAACAAACTTGAGGGTCCAGTACCCTCAAATGGGATGCTGGTGACCATAAATCCTAACGATCTTATTGGCAATGAAGGTCTTTGTGGAGGCATTCTCCCTCCATGTTCTCCAAGTATGGCTGTGACAAGCCATCGAAGGAGCTCGCATGTCAGACACATCATAATAGGTTTTGTGGCTGGCATTTCAGTGATTTTAGCTTTTGGTGCAGCATATTTTGGTGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATACAGCTATGGGGTGGTGCTTTTGGAACTTCTAACTGGCAAAATGCCTTTAGACCCTTCGTTTGAAGAATCTATTGACATAGTCGAATGGATACGGAAGAAGAAAAGCAACAAATCCTTGTTAGAAGCACTGGATCCTGCCATAGCTAGTCAATGCAAACATGTCCAAGAAGAAATGTTGCTTGTACTCCGGATTGCACTTCTATGTACCGCAAAGCTTCCCAAGGAAAGACCACACATGAGAGACATCATCACAATGCTTGGTGAGGCAAAGCCAAGAAGGAAAAGTGTTTGCCATAATGGGGGTCAAGAAAGCAGTAGCATGGAAAAGTCCATTGTCCTTACCACCTCCCCTGCTATAAGTCTTTTGTAG


Promoter Sequence:
>Vu_30189::LG8:34582007-34584007(+)
CCCAATCCAGCCCACCACGGGTTCAACTCGCATGAGTCGGGTTTAAATGAGTCGGATTGAAATCTGACCCGCATATTGAAATCTGACCCACATAAAAATAATACAATTTTTTAAATCCAATCCGGCCCGAATCCGTGATGGGCTGGGTTGGCGGGTTGTGACTCATTTTGACAGCTTTAGTGCTAACTTAATTAAATTATAACTATGTAAAGACATTTTTATTTAGATTTTAAAAACTGTAAAGTAAAAGTTTGTAAAACTTAATACATTTTTAAAAAATTTGAGAAACTTAAATTTAATCTTAAAAAATCACATCATTCTATTTAAAAGAAAGAGAGTACTTTTAATCTTTTATCATTTAAATTATATATAGTATAAGAATGAGATAAAGTCATCATTTAGAATAATATAATTTCAAAACGATTATTTAAGTGAAAATCGGGTTAAAACAAAATAATACACTAATCAGGTATTAAGACACTATGGATATAACTAATTTTGGCCCATCTAGATATTAAGAAGTATACATTGTTAATTAATTATTTACTTTTATTGTGTTTGTTTTATATACTATCATTCTGAACGTTAGAGTATCTTTGCAATCACTCCAAACTATCATCACCCGAATTGATAAAAGTAATGATTGAAGAATTTAGGTTAGAATGCCTATTTGTTTTGGCAGAAAGGGTAAATATAGTAAATCTAGATACTCCATTCAAACCCTAAAATTACATTTTAGTGGATCCAAATAGAACATCCCAGCTATGTAAGTAGATATACCAAACTAAATTAAATAAATAATAAAAAAAGAAAATAAAGTTTGGAAAGATTAAATTAAATATTTTGTTAGAATTATGGAAATGTATTGGTTGCCCATAAATAATAAATTGTTGGGTCTGAAATATGATTAATGGCGGTGGTGGGCCTGTGTCTTGGTCGTGGAGCCATGTGGGGAACCTAATCTTTCACCCTTTCAAGATTCGAAATTGGGTACAAAAAATAATAGTGTGTGACGTAGTTGTAAGCATCAAGCAGCTTCTTTTTTCTCGTGGTTGAATCACTTCCAATAATGAGGAATCAAGTACTGTTTCTCTTCCCCCAGGAAGTTCCCCAGTTCACATGCCTTCCAGCCCTTTCCCTTTTATTGTTTATGGCTCCAATTATTAATCTTTCATCTTATAGCTTCATTAAATTTTATATCTATCACCATCTATAATAATTAGCATAGAGCCAGATGTACCCATGTGGTGGCCATAGAATGGGACACAATTGCTTTATCAAAGGGAATGGGGTTTGGTAGGTGCAGACAATCATTGTCACATAACACATTCCCTACTAAAATACACTTCTCTACCTTCTTTACACACTCCACACCACAAACTTCCAAACTCTCTTCTTTCCGCCCTGGTTTTGCATACTCAATACCTACTTTGGAAGTGCTTAATCATACAATTTGGCATAATAAAGCAACATGATTCTTAATTACTTGCACTTCTGGTATGTGTGACCACTTATGCTAAGTGGTGAAAATATACTAAAATTCAACTCCAAAATCCGATGTCTTAGGTTCAAATCCTACGTTATTGTGAGTAGGTGATTCAACACCAGACGCTATATAGCTACCTTAGTTATATAGATCGTTTACCTAGGTACAGAATGAGACCCCAGGTCCAATGTTTGATTAAAAGCAAAAGTGGTGGTGTTACCATTAAAATAAAGAAGACTTGGATGAGTTAAACTACTCGCTTGGGTTGACATTATAAGCAATTCTGGAACACATTCTGTGCATGTTATGATGTCTAGGGGATTTCAAATGAGTCCAAAGATTGACAGTGATCAGTTGCACATGATTAGGTGGTTCAGATCCCAAGTACCCACGTATATCCAATAAAATAATTGCCTTTTGGCTTATCATTTATCTGTCACTCATTAGATTAACTATAAACTAATTTGTCTCTCAGAACTTCCTTCTCCTTCCCTTCGCTCCTTGTTCCCTGCTA


Gene Sequence:
>Vu_30189(+)
ATGCAAAATGCAACAAGATTAAGAGGATCCAACACCAAGAGAGCAACCACCAAAATGCAAACCCACCTGCTGTTCTTCTGTTGTTACATTGGCCTCTCACTGGCTTTTACTGAAGCTGCAGCAGATGGTGAACTGTCAAGTCTTCTCTCAATCAAAGCCACTCTCATTGACCCAATGAGGCATCTGAAGGATTGGCAAATTCCAAGCAATGTGACACAATCAGGATCACCCCATTGTAACTGGACTGGAGTTGGTTGCAACTTTAAAGGCTATGTAGAGAGTCTTGACCTCTCCAACATGAACCTCAGCGGTCGTGTTTCGGACCACGTTCAATCTCTTTCAAGTCTGTCTTATTTCAACATAAGCTGTAACAACTTTGCTTCATCACTGCCCAAGTCACTGTCCAACCTCACCTCTCTCGAGAACTTTGATGTGAGCCAGAACTACTTCACTGGCAGCTTCCCCACTGGTCTTGGAAGAGCTGCAGGCTTGAGATTAATCAATGCATCGAGCAATGATTTTTCAGGTTTTCTTCCTGAGGATATTGGAAATGCAACCATGCTTGAGAGCCTTGATTTTCGAGGGAGCTACTTCGTGAGTCCAATCCCCAAGAGCTTTAAGAATTTGCAGAAACTCAAATTTCTGGGCCTTTCAGGCAATAACTTCACGGGGAGGATTCCAGGATATCTCGGTGATCTAACTTCTCTGGAGACATTGATTATCGGATACAATTTATTTGAAGGTGAGATCCCTGCAGAGTTTGGGAACCTGATCACTCTTCAATACCTTGACTTGGCTGTAGGAAGTCTCAGTGGACAAATTCCAGCTGAATTGGGTAAGCTGACAAAACTCAACACAATTTACTTGTACCATAACAACTTCACAGGAAAAATTCCTCCTGAACTTGGAGACGTAACTTCACTGGCATTTTTGGACCTCTCTGACAATCAGATCTCCGGAGAGATTCCGGAAGAACTTGCTAAATTGGAAAACCTGAAGCTCTTAAACCTGATGACGAACAAACTAACTGGACGAGTACCAGAGAAGCTTGGTGAATTGAAAAATTTACAGGTGCTTGAGCTCTGGAAAAATTCCTTACATGGTCCTTTGCCACCATACCTTGGGCAGAACTCTCCTTTACAGTGGTTGGATGTATCCTCTAACGCACTATCTGGGGATATCCCTCCAGGTTTGTGTACAACTGGAAATCTCACTAAATTAATCCTCTTCAATAATTCCTTCACTGGCTCCATTCCAAGTGGACTTGCGAACTGTTTGTCTTTGGTACGTGTTCGGATTCAGAACAATCTTATTTCTGGAACTATTCCAGTTGGCTTTGGAAACCTCCTTGGCCTTCAACGGCTAGAATTCGCAAAGAACAACCTCACTGGGAAAATTCCCTCTGATATTACCTCATCCACATCGCTCTCTTTCATTGATGTATCTTGGAACAACTTTGAGTCATCTCTTCCGTCAGATATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCATAACAATTTTGGAGGAGATATCCCAGATGAGTTCCAGGACTGTCCATCTCTCTCTGTATTGGACCTTTCAAACACTCATATTTCTGGCACAATCCCTGAAAGTATTGCTTCTTGTCAAAAATTAGTCAACCTTAACCTTCGAAATAACCACTTGACAGGAAAAATCCCAAAATCAATCACAAGCATGCCCACTTTATCTGTTCTTGATCTTTCCAACAACTCATTGACCGGTAGGATTCCTGACAACATTGGCAATTGCCCTGCTCTGGAATTGCTGAACTTGTCCTATAACAAACTTGAGGGTCCAGTACCCTCAAATGGGATGCTGGTGACCATAAATCCTAACGATCTTATTGGCAATGAAGGTCTTTGTGGAGGCATTCTCCCTCCATGTTCTCCAAGTATGGCTGTGACAAGCCATCGAAGGAGCTCGCATGTCAGACACATCATAATAGGTTTTGTGGCTGGCATTTCAGTGATTTTAGCTTTTGGTGCAGCATATTTTGGTGGTAGATGTTTGTACAATAGATGGCACTTATATAACAACTTCTTCTATGATTGGTTCAAACAGAACAATGAAGATTGGCCCTGGAGACTAGTAGCATTCCAGAGGATCAGCTTCACTAGTAGTGAGATTCTGACTTGCATGAAGGAATCAAATGTTATAGGAATGGGGAGCACTGGTATCGTTTACAAAGCTGAAATCCATAGACCTCACGTAACCGTAGCAGTGAAGAAATTGTGGAGGTCACGAACAGACATAGAAGATGGAAATGATGTGTTGAGAGAAGTGGAACTCCTAGGGAGACTTAGGCACAGGAATATAGTAAGGCTGTTGGGGTATGTACACAACGAAAGAAATGTGATGATGGTTTACGAATACATGCCTAACGGGAATCTTGGAACAGCACTACATGGTGAAGAATCTGCGAGGTTGCTTGTTGACTGGGTCTCAAGGTACAACATAGCTCTAGGAGTTGCACAAGGGCTTAACTACCTCCATCATGATTGCCACCCACCAGTTATTCACAGGGATATCAAGTCTAACAACATACTCCTTGACGCAAATTTAGAGGCGAGAATAGCAGACTTCGGGTTGGCAAGGATGATGATTCAAAAGAACGAGACAGTTTCCATGGTGGCTGGATCATATGGATACATCGCACCAGGTTAGTACTTAGCTCTTCTTATCTGATCTAGCGTGGCAGTTTATGCCCTGATTTCTGTTTTCGTAACTTCTATCTCAAACAAGTGAAAGTGAGAGACAATAGATGATTAACTTAATGATTGGGTTATGGTTTTAGAATATGGATACACTCTGAAGGTTGACGAGAAGATTGACATATACAGCTATGGGGTGGTGCTTTTGGAACTTCTAACTGGCAAAATGCCTTTAGACCCTTCGTTTGAAGAATCTATTGACATAGTCGAATGGATACGGAAGAAGAAAAGCAACAAATCCTTGTTAGAAGCACTGGATCCTGCCATAGCTAGTCAATGCAAACATGTCCAAGAAGAAATGTTGCTTGTACTCCGGATTGCACTTCTATGTACCGCAAAGCTTCCCAAGGAAAGACCACACATGAGAGACATCATCACAATGCTTGGTGAGGCAAAGCCAAGAAGGAAAAGTGTTTGCCATAATGGGGGTCAAGAAAGCAGTAGCATGGAAAAGTCCATTGTCCTTACCACCTCCCCTGCTATAAGTCTTTTGTAG