Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30717 LG8 40281199 40285231 PREDICTED: calcium-dependent protein kinase 4-like isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, positive regulation of abscisic acid-activated signaling pathway, positive regulation of abscisic acid-activated signaling pathway, positive regulation of abscisic acid-activated signaling pathway, positive regulation of abscisic acid-activated signaling pathway, positive regulation of abscisic acid-activated signaling pathway, peptidyl-serine phosphorylation, protein autophosphorylation, protein autophosphorylation, peptidyl-serine phosphorylation, intracellular signal transduction, peptidyl-serine phosphorylation
Cellular Component   is active in   cytoplasm, nucleus
Cellular Component   located in   plasma membrane
Molecular Function   enables   calcium-dependent protein serine/threonine kinase activity, protein binding, protein binding, calmodulin-dependent protein kinase activity, protein kinase activity, calcium-dependent protein serine/threonine kinase activity, protein binding, calmodulin binding, protein binding, calmodulin-dependent protein kinase activity, protein binding, protein binding, calcium ion binding, protein kinase activity, calmodulin-dependent protein kinase activity, protein binding, calcium-dependent protein serine/threonine kinase activity, protein kinase activity
Pathway   B 09159 Environmental adaptation   C 04626 Plant-pathogen interaction [PATH:ko04626]
SNP Position Effect Amino acid change
A/T 40281536 upstream_gene_variant
C/T 40281537 upstream_gene_variant
T/G 40281571 upstream_gene_variant
T/G 40281880 upstream_gene_variant
A/T 40282010 upstream_gene_variant
G/A 40282092 upstream_gene_variant
A/G 40282112 upstream_gene_variant
A/G 40282207 upstream_gene_variant
T/A 40282210 upstream_gene_variant
C/T 40282352 upstream_gene_variant
T/C 40282628 upstream_gene_variant
A/T 40282630 upstream_gene_variant
A/G 40282648 upstream_gene_variant
G/C 40283024 upstream_gene_variant
A/C 40283280 upstream_gene_variant
G/T 40283527 upstream_gene_variant
A/T 40283663 intron_variant
C/T 40283783 intron_variant
A/T 40283784 intron_variant
C/A 40283874 downstream_gene_variant
T/G 40284116 downstream_gene_variant
T/C 40284125 downstream_gene_variant
A/T 40284131 downstream_gene_variant
A/G 40284206 downstream_gene_variant
G/A 40284304 downstream_gene_variant
A/C 40284396 downstream_gene_variant
G/A 40284679 downstream_gene_variant
A/T 40284822 missense_variant p.Val137Glu
A/G 40284830 synonymous_variant p.Ile134Ile
T/A 40285035 missense_variant p.Glu66Val
T/C 40285148 synonymous_variant p.Gly28Gly
C/T 40285193 synonymous_variant p.Val13Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30717.1
MSKDWSASKSKNVLPHETPDLLEHYIVGQKVLGKGRLATTYVCTHNETRKTYACKTIPKTKLLCQEEYDDVWREVQILHHLSEHPNVARIQGSYEDKFAVHLVMELCRGGELFYRITQKGYFSEREAAKLMKTIVGVVEVCHAHGVIHRDLKPENFLFDTIATDATLKVIDFGFSVFFKPGQTFSDIVGTCYYMAPEVLGRQSGPEVDVWSAGVILYTLLRGLPPFWAKSESGVFKQILHAEVDFASHPWPSISGSAKDLIKQMLDKDPKKRISAHEVLCHPWIVDDSVAPDKPLDPAVLTRLKHFSTMNKLKKMAIRVIVERLSEEEIGGLKEIFKMIDEDNSGTITFQELKDGLKSVGCDLMESEIRSLMDAADIDNNGTIDYGEFLAATMHLNKMEREENLVAAFSYFDKDGSGYITIDELQQACKDFGLGELHLDEMIKEIDQDDVSSSDQ*


CDS Sequence:
>Vu_30717.1
ATGTCGAAAGATTGGAGCGCATCAAAGAGCAAAAATGTGTTGCCGCACGAGACCCCGGACCTATTGGAGCACTACATTGTGGGACAGAAGGTGCTGGGAAAAGGGCGCTTGGCCACCACCTACGTGTGCACCCACAACGAGACAAGGAAGACTTACGCGTGCAAAACCATCCCAAAGACGAAGCTTTTGTGCCAAGAGGAGTACGATGATGTGTGGAGGGAGGTTCAGATCCTGCACCATTTGTCGGAGCACCCCAACGTGGCAAGGATACAGGGAAGCTACGAGGACAAGTTTGCGGTGCACCTTGTGATGGAGCTGTGTCGTGGGGGTGAGCTTTTCTATAGGATCACTCAGAAGGGGTATTTCAGCGAACGAGAGGCTGCCAAGTTGATGAAGACCATTGTTGGGGTGGTGGAAGTGTGCCACGCTCATGGGGTCATTCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATACCATCGCCACGGATGCCACCCTCAAGGTTATCGATTTTGGTTTCTCTGTCTTCTTTAAACCAGGACAAACCTTTAGTGATATAGTAGGAACTTGCTACTATATGGCCCCAGAGGTGTTGGGCAGACAGTCTGGACCAGAAGTGGACGTTTGGAGTGCTGGTGTTATTCTATACACCTTACTGAGAGGGCTTCCACCTTTCTGGGCAAAATCCGAATCAGGAGTTTTCAAACAGATTTTGCATGCAGAAGTTGATTTTGCATCTCATCCGTGGCCAAGTATATCAGGAAGTGCTAAAGATTTGATAAAGCAGATGTTGGATAAGGACCCCAAGAAAAGAATTTCCGCTCATGAAGTCTTGTGTCACCCTTGGATTGTTGATGACAGTGTTGCCCCGGACAAACCTCTGGATCCTGCTGTTTTGACGCGCCTAAAGCATTTCTCAACAATGAATAAACTTAAGAAGATGGCGATACGTGTCATAGTAGAAAGACTTTCAGAGGAGGAAATAGGTGGATTAAAAGAGATATTTAAAATGATTGACGAAGACAATAGCGGGACAATCACTTTTCAGGAACTCAAAGATGGTTTGAAAAGTGTGGGATGTGATCTCATGGAATCTGAAATTAGATCCCTTATGGATGCGGCTGATATAGACAACAATGGAACAATAGACTATGGTGAATTTCTCGCAGCTACAATGCACTTGAATAAGATGGAAAGAGAAGAGAATTTAGTTGCTGCTTTTTCCTATTTTGATAAAGATGGTAGTGGTTACATCACCATTGATGAGCTTCAACAGGCTTGTAAAGACTTCGGCCTTGGTGAGTTGCATCTGGATGAGATGATCAAAGAGATTGATCAAGACGATGTAAGTTCCTCTGATCAATAG


Promoter Sequence:
>Vu_30717::LG8:40285231-40287231(-)
AATAAGTTGTGATGAGATTACTTAATTTTCTGAAAGGGAATAATATTATTAATTTTGTAAGCTTTATAAGTTCAAGCAAAGTTAGAATAAGAAAAAGAAAATATAAATTAAAATGATTAATACAAATAAAAAACTAAGTTAAAGAAGTGTTATAAATACAAGGTTATTTTCTAACATATTAGGTAAAATGATTTAAAAAGAAAGCATATAGTCAACATGATTACTTAACTTTGTTATTAGAGTTGAGATATAAATATGTTTTCTGGATCCCATTGTTAATAATTGATTTTTTTAATCGGCTAATATATTAATAATAGGATATATGTACAATACCTATTGATAGTTCAGATGATTGATGACCAATAATAGTAGCATGTTAACTGATTAGTTATATGATCGATGACATCGAACGTATTACTTCGTGTATGACGCGATTAACTAATCTAAAACAGTTTAACATAAATTAATTAAATAATTATATTAAAATATATTGAGACATAATTAGGTTGATAAGAAGTGAAAATCTATAAGAAATAAAATATAAATACGAGATTAAAGTAAGATAGTTTTACATTGATTATTTTATTTCATATTATTGTATTTAATTTTTTTGTTTTGGGACACTTGCTAACTTTAATATTAAAATATCTTCTATAGGTGTCAACCAAGTAGTTAAGGATGAATGAAACATGTTTGATGGTTGACAAATTGGAGACACAAGTTCTCTAGTGAACGTTGTCCCGAAGAATTTATAAAAACAAAGCTGTTTTTTTAGTTTTAGATACTTTTTTGAAGAGATTTTGAGAGAACTTATAAATCACTTACCTTTTATTGAGTAAACACGATTAGAGGTTATAAGAGAGAACGATTCTTCAATATATTGTATTATTTTCATCGAGGACCTAAATCTCTTTAAGTGTTAAAGCAAATATAACTCATTGAAACTCTATTTATTTATCAAAGTACATTTTTATTACATGTTTATGAATTAGTAGTTTATATTTATTGTCGGATGAACTTATCACTCATCTTATTTTAGTGACTTAAGATTGATTGGGAGGTAGTTTTAAGTTGTGATCCAACTAATTGTCATCCTACTTTTAGATGTTAGGAATAAACGTAAGATTCTAATTAATTATAAAGTCATGATGAAAGATATTCATTCAAACTATCACTGATGAATACATTTAAATAAAACTCTGATGACATGATTTAATTGTATATTTATAAATAAAGATTGATTGATTACAATATACAAAGTGATGAAATATAACTTTAACAAGTTTTTATTGTCTTGAAAGATAATCATATACTCATAATTGTTTTAGTAGATTGTTAACATATTAAATGAAAACTATTTCTTTACATCAAACTTATTTTCTCACTTCTAATACATATCTTCCATTGTTTGATTTTAATCAAACTTGGTTAAAATTTTGTGTATTCTCCAAAATTCCGATAAATACAATATTGTTGTACTATAAACCATCCATGCTGGAAAAATTAATTACTTTTGAGCATCAACATTTGCTGCGACCCTTTTACAAAAATATATCCATATATAAGGCTTTTCTCTAATTAATCCGGAATTTCCTCTAGCTCCGCATTTTGAAACGAACCTACGGATTTCCAAAGTTTGAAACATACTAATAATTGTGTTTGCTGTATGGTGTCTGCCTCTACCATGATAGATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTAGAATCTATTAATGATGAATGTAGGTGAGAAATTTTTTTTGCTGCCCATAAAGTGAGCTAAAGATAAAATTGATTTTGGTTTTGGACCTGATTCAAACGACAGTAATTATGGCCTTGACAGTTGTTACAAGACACTAAAAATGTGGCATGGTGATCGTGGGAATTCAGTTGGTATTATGAGTTTTGGAGATTGTTAGGAGGGAGGAGGAAACTGGGAAA


Gene Sequence:
>Vu_30717(-)
ATGTCGAAAGATTGGAGCGCATCAAAGAGCAAAAATGTGTTGCCGCACGAGACCCCGGACCTATTGGAGCACTACATTGTGGGACAGAAGGTGCTGGGAAAAGGGCGCTTGGCCACCACCTACGTGTGCACCCACAACGAGACAAGGAAGACTTACGCGTGCAAAACCATCCCAAAGACGAAGCTTTTGTGCCAAGAGGAGTACGATGATGTGTGGAGGGAGGTTCAGATCCTGCACCATTTGTCGGAGCACCCCAACGTGGCAAGGATACAGGGAAGCTACGAGGACAAGTTTGCGGTGCACCTTGTGATGGAGCTGTGTCGTGGGGGTGAGCTTTTCTATAGGATCACTCAGAAGGGGTATTTCAGCGAACGAGAGGCTGCCAAGTTGATGAAGACCATTGTTGGGGTGGTGGAAGTGTGCCACGCTCATGGGGTCATTCATAGGGATCTCAAGCCTGAGAATTTCTTGTTTGATACCATCGCCACGGATGCCACCCTCAAGGTTATCGATTTTGGTTTCTCTGTCTTCTTTAAACCAGGTTCCATTCATCGCTTATATTCAATTCGATTTTATAATGCATGCCTTTCCGTATGAATTTGTCAATCAAAGTCATCAAATTACCTCCCATCAATGTATGTGTAGTGTAACAGGTCCTTACAGATTAGTGCGAATCAACTTCAACACATTTGTTGGTGTGCCCGTGGGTTTAGCTGCTTGCTTACCCTTGACATGGGTATCAAAAAATAGAGAAATATTAAATGTTCAAGATTTCCTGTTTAATAAACCTCTCAGTAGGATTTAGAAATGTTCCCCTATGTCTATCTATGTCTAATTTACAAAATTATGATGCATGGTTATGGTTAACTTAATAACAACAGGATTAATGTAAAATTTAGAATCACAAACAATGGAATGCAGAAGAACCCATCTCTATCTATCAGCTAGAGTTTTTCGCAATGCCGTGCATTAAAATCTATCTAATAAGACAATAATTCTATAGTTATACAAAATTATGGTGAGCATTAAGTGAAAGGCCAAGATATCATAAACTCACTGCCATCAAATGCTAGTCTAATTAAAACAATCCATCATTTAATTAGCACAATATAATGATTTTTGTAAATTTTGGTGTAATAAGTTTTCCAAGAGATATATCGTGTCATAGTTGTATTGTATACATTTCGAAAGATGACCAAAAAAAATTATATCTTTTGGTGAACCAACCATCTTGTTCATACATTCTTTTTTGAGTTAGTTTTCTGTTATAATTCAGACTAAATTGTAACTGTTTTGTGCTCCTATATGAGGGAATGTTGAGCAACAAATAAATAGTAAGCAACTTAATGATTATTTTGCTTTCTTGATTAATTCTGAATAACTTACAAAGAGTCCTTTCATTTCTATCTGTGTGTTTGTTCTTTATTTTGTCTTAAATGGTGTAATTTGCTTTACCTATTTGCTAGTTCTTTCATTGTTATTGGACACAATTTGGCACTTGGTGCAAAACCATTATTTTCATAATTAATATTATTTAATTATCTAATTCTAATCCACAAATTTCTGACTCACATTATATGCCACTTTTTTTTTTCTTGATGTTATATAAATTTTCCTTGGTCACTTAACCATCTTCCTGGATTTAGTATGCGTGTATGATTTTGGCAAACAACTACCGAACACACTCTTACCTTTGCCCTTTTTCTTGTTTCTTCTCAGGACAAACCTTTAGTGATATAGTAGGAACTTGCTACTATATGGCCCCAGAGGTGTTGGGCAGACAGTCTGGACCAGAAGTGGACGTTTGGAGTGCTGGTGTTATTCTATACACCTTACTGAGAGGGCTTCCACCTTTCTGGGCAAGTAATGATCCTAATGTTTACTGTAATTCTCTTCGACTAACAACTGAATTTTTTTCTCTGTATATTATTTGATCATATGCTTGTTATCTTTGTGCCTGAGTTGCATTCAATTTTTTCTTTTTTTCAGAATCCGAATCAGGAGTTTTCAAACAGATTTTGCATGCAGAAGTTGATTTTGCATCTCATCCGTGGCCAAGTATATCAGGAAGTGCTAAAGATTTGATAAAGCAGATGTTGGATAAGGACCCCAAGAAAAGAATTTCCGCTCATGAAGTCTTGTGTGAGTTTCTTGAATACTAGTTTTAACTGAATTTTCTTGTGCTATTGGTGTATGGCAGCTCATTACAATGTCATAGCTTGGTAAAAGATCTAACAAGCATGGAGGCTTGTATTCTCAGGTCACCCTTGGATTGTTGATGACAGTGTTGCCCCGGACAAACCTCTGGATCCTGCTGTTTTGACGCGCCTAAAGCATTTCTCAACAATGAATAAACTTAAGAAGATGGCGATACGTGTATGTTTAATTGTTATGCCTTACCTTTTTTTTGTTTGATTTCAACCATGATATTAATTTTTTCTTGAGGCTTATATTAAAAATTTGTCGAATGAGATAACCTATCATAACTTATTGTTGCAAAATCAATCCAAAATTCCAGACATTAATACAGGTAGTGGAAAGTCAGGATTCCAAGAGGTAGGGGTAGGAATGCATCTTGACTCTTGAAGAATCCCATTCTCATAATGAGGCATGGATGAAGAGGTGAAATAATTAAAGTCTATTGAGTCTTATTTATGGTGGCAGTCATGAAGCTTTGTTTTATAAAGGGACATATGAAGAAAAACGATACACTCAATCTAGAGAGAGGGTCACCGCCCTAAGATGCGACAGGATTTTCTCAAGTTTTTCTGGAAAACTAATGCATTGTTATATAATGAAATACTTTAGAGACAATTTGGTGGAAATAGACACGAGGTGTCTAATCATGTAAATTCATACTTTTCGGTTGTTTTGTGTATGGTCTCGTACTTTGACCCTCATTAGGTGTGAGAGGAGTTTTTCCCCATCACTTCTATATGACATAAAAGTTTCATGTGCCATTTTTTTGGAGGGTTATCTAATTCTGGACGAATTTTCATTTAGTTTTTAGTTTGAATATATATATACACACAAAAGGGTTCTATGAATCCATTTCTCTCTTAGGTAAGAGTTTTCTGCTTTTGCTGGATATTTCTATCCTCGGTAAGGTTTCTGTTTGTTCTAGCGTGATGATTAAATCCAGTTCTATGGTCTCTTTGTTTAAGCATTTCCATTCATTTTGATTTTGGGTCTTTTATAAGGACTTCTAGAAAAGAAAAATATGAAGAAAAAAAATGAAATTATTTTCTTTATAGGTTAAAATTAGCTTCTGTACAAGTGAAAAATAAAAATGTAGAGAAGTTATTTGAGAGAGGTTCTCCAAATTAGATTATGCATGCAGAAGTCAATTTCATTTTTTTCTTCTTATTTTCTCTGAAGTTTGTCCAAACATAAATGATCTTTATGCTTTATCATTTTTCTGTACAGTATTGTGTTCATATAAGTCGTGCACTTATATTTTACGTTGAAAAATTCTTCAGGTCATAGTAGAAAGACTTTCAGAGGAGGAAATAGGTGGATTAAAAGAGATATTTAAAATGATTGACGAAGACAATAGCGGGACAATCACTTTTCAGGAACTCAAAGATGGTTTGAAAAGTGTGGGATGTGATCTCATGGAATCTGAAATTAGATCCCTTATGGATGCGGTAGGTAGATTATAGTTAATATAGAATAGAATGTAATAAAAACGGAGGTGTTATGTGAAAAAGCTGCATATCTTTTTTGCTTCTTTTGTATACGTTGAACTGGGTGATCTTTAACTGGTCTCTCTTGTGCACTTTGGCAGGCTGATATAGACAACAATGGAACAATAGACTATGGTGAATTTCTCGCAGCTACAATGCACTTGAATAAGATGGAAAGAGAAGAGAATTTAGTTGCTGCTTTTTCCTATTTTGATAAAGATGGTAGTGGTTACATCACCATTGATGAGCTTCAACAGGCTTGTAAAGACTTCGGCCTTGGTGAGTTGCATCTGGATGAGATGATCAAAGAGATTGATCAAGACGATGTAAGTTCCTCTGATCAATAG