Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30721 LG8 40336311 40337605 PREDICTED: ABC transporter G family member 25
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   intercellular transport, abscisic acid-activated signaling pathway, response to abscisic acid, response to cold, transmembrane transport, abscisic acid-activated signaling pathway, abscisic acid transport, intercellular transport, response to heat, export from cell, abscisic acid transport, response to cold, abscisic acid-activated signaling pathway, export from cell, export from cell, intercellular transport, abscisic acid-activated signaling pathway, response to abscisic acid, abscisic acid transport, response to abscisic acid, transmembrane transport, intercellular transport, export from cell, response to abscisic acid, transmembrane transport, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, export from cell, export from cell, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, response to heat, transmembrane transport, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, negative regulation of post-embryonic development, negative regulation of post-embryonic development
Cellular Component   located in   plasma membrane, plasma membrane
Molecular Function   enables   efflux transmembrane transporter activity, ABC-type transporter activity, efflux transmembrane transporter activity, ATPase-coupled transmembrane transporter activity, ATPase-coupled transmembrane transporter activity, ATPase-coupled transmembrane transporter activity, ATPase-coupled transmembrane transporter activity
Pathway   B 09131 Membrane transport   C 02010 ABC transporters [PATH:ko02010]
SNP Position Effect Amino acid change
C/G 40336344 missense_variant p.Leu12Val
A/T 40336628 synonymous_variant p.Gly54Gly
G/A 40336746 missense_variant p.Gly94Arg
T/C 40337002 missense_variant p.Val179Ala
G/A 40337010 missense_variant p.Ala182Thr
G/T 40337337 stop_gained p.Gly291*
G/T 40337555 missense_variant&splice_region_variant p.Gly321Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30721.1
MPSPTPNGDSNLPPNHTPQQSRDIPPFFSSSYPITLKFMDVEYRLKIEDKKKTGGTIKTFFTPSESSPSHQGSSPAVPQERVILKGVTGIVHPGEILAVLGPSGSGKSTLLNALAGRLHGNGLAGTILANSSKLNKSVLRRTGFVTQDDILYPHLTVRETLVFCAMLRLPRALPRAAKVAAAESTIAELGLRKCEHTIIGNSFIRGVSGGERKRVSIAHEMLVDPSLLILDEPTSGLDSTAAHRLVVTLGSLAKKGKSVITSVHQPSSRVYQMFDKVVLLSEGQCLYFGKGSDAMRYFQSVGFAPSFPMNPADFLLDLANVVSDVGFQGSVFVCVCD*


CDS Sequence:
>Vu_30721.1
ATGCCATCACCAACCCCAAATGGAGACTCCAATCTCCCTCCCAATCACACCCCTCAACAATCCCGTGATATCCCTCCTTTTTTCTCTTCTTCTTATCCCATCACCCTTAAGTTCATGGACGTCGAATACCGCTTGAAGATAGAGGACAAAAAAAAGACCGGAGGGACCATCAAGACCTTCTTCACGCCCTCCGAATCATCGCCATCTCATCAAGGATCAAGCCCAGCCGTGCCGCAGGAGCGAGTTATTTTAAAAGGCGTCACGGGAATAGTACACCCCGGGGAGATCTTAGCGGTACTAGGCCCATCGGGAAGCGGAAAATCGACGCTCCTAAACGCGCTCGCAGGGAGGCTCCATGGGAACGGCCTCGCCGGAACAATCCTGGCCAACTCCAGCAAACTCAACAAATCGGTTCTTCGGAGAACCGGCTTCGTTACACAGGACGACATCCTCTACCCGCATCTCACGGTTCGGGAGACGCTGGTGTTCTGCGCTATGCTGCGCCTCCCTCGCGCGCTTCCGCGCGCGGCGAAGGTTGCGGCGGCGGAGTCGACCATCGCGGAGCTGGGGCTGAGGAAGTGCGAGCACACGATAATAGGAAACAGCTTCATCCGCGGCGTCTCCGGCGGGGAGCGGAAGCGCGTGAGCATCGCGCACGAGATGCTGGTGGACCCCTCGCTGCTGATCCTGGACGAGCCCACCTCCGGTCTGGACTCGACGGCGGCGCACCGCCTCGTGGTGACGCTTGGGTCACTGGCGAAGAAGGGCAAAAGTGTAATCACATCGGTGCACCAACCTTCCAGCCGTGTGTACCAGATGTTCGATAAAGTTGTGTTGCTTTCTGAAGGACAGTGTTTGTACTTCGGCAAAGGAAGCGACGCCATGCGGTACTTTCAGTCGGTTGGTTTCGCGCCGTCATTTCCGATGAATCCGGCGGATTTTCTACTCGATCTCGCAAACGTGGTGAGTGATGTTGGCTTCCAAGGAAGTGTTTTTGTGTGTGTTTGTGATTGA


Promoter Sequence:
>Vu_30721::LG8:40334311-40336311(+)
GGCTAAAATATAGTTTAGTAATGTACTCTATTTAGTAGCTTTGTTCGTGATAAATCTAGGGCAAGATAATAATGTTTATTAAAAAAATATAAATTTAACTTTTAAAGATTAAGTTGTAACCGACTCAAATATGATATAATTTTTTAATTTGAAAAACGTAAAATCATATTTAATTTTTTTACAACTAAAACAAATATTTAATCTCTTAAAAAGTGTATTTTTTAAGTTTGAGAGAAAGTTATATAAGATAAAAGAAAATTGTAATTTTCTTTAATATGCGAATATCTAACTAAATAAAAATGGACCCTACACCATCAGAAGCTTTACAATTTTCATTCTCACTTTAATTCATTGTATGCAAAATAAATAATTACCCAGGCATATTTTGTATTACGAAAACTAAACGTGAAAGGAATGGAACTAATTTTCAAAGTAAATATCCATCCAAAATGTTTGAAAACGTGAAAGTCATTGTATGACCGGAAGAAAAGTGCTAACACACACCCTTTCAATACAGTGAAAAAAATATAATAAGCACGCAATCGGAAATCCATTTTTTTAAATATTTTTTTTTTCATAATCATTTCTATATATAGATCAGATTTCTCGATCACTCAATTTAGAGCGACTCAGAAATATTACTGATCCATTACAGGATCTTGTATTAGAAGTATAACAGAATAAGGAGTTTAAATATAACAGATCAAATTAATTAACGTGCATTAATATATAGATAGAGCACTTTTAAACCTGTGTGACTGAATACAATTTGTATCTAAAATTAATACGTTTTATAGTAGATTTGTTTACTAAATTAAAAAATTAATGTTGTACTTTTATATAATTTTAAATGAGTTATTTATTATTATTATTTTTTACTTTTAATTTAACATATATTTAGATATTATTGTATTTTTTCCGTTTTTATTTTTTTTATCCCTATATTAATTAAATAAATAATAAAAAGTATATTAACTTAATTTTTTTTAATAACAAATAAAAGGAATAATTTTCGTTGAAAAAGACATTTAAAAAGAAGTAAAAAAATAGTAATTTCTTATTAAAACATCACATGTATTCCCTGTTTTGAAAGAGAGCAAGAATCTAAAAGGAAAATACGACTGTTTCCAGATATATGCACAACTCAAATGAATGCACGTTTGAGATTCATTTCACATTCCCACAAATATTTCAAGTAATAAATGTTGAGCCATTGAAAGAGAAAGTTAAATGTAATAAATTTGCTTTGAGAATTATTGATGGTAAGTAAAGCACATTGTACATATTTGGGAAGAAGAAGAAATAATCAAAGTATGAAAAAAAATTATATTTTAAAATTGGTAAGATGGGTTCGTAATTTGAAAGCATGATGACAGTTTGTGACGAAAACCAGAAAAAAAATGGCAGAGGATAAGGGGATGTTAGGTTGAGTAATTGTAGTAAGAATGTGAAGAAGAAGATGGATAGATGTGTTGGGTATGTGATGGTGGTGGCAGGTGTTCCAACTACCTTATTATTTCCCGATGAAGATCGAAAAAAATCCTGAACAACTCATGAATACGCCTCCTGTTGCCAAGGCAATGGGTAACAACAGCAGCTGCAGTGTCTGCTCCTACCATACCAGTACGTTTTTCAAGTTCTGAGCAGTATTTAAGATTCTGAAACACCTAATATTTCTTTTTGCATTTAAAAAAGAAAAAAAAAAGGGAAGAGATAAAAGAAGAAAAAAGTATGAGGAAGAGAAAGTGGACCATTCCACGAAACATTGCACCATGCCAAACGATGTATATGATCGCCACGTATCAATTCGAAATTGGTAGTTCTACTTTAACGTGGCAGTGCCATGGGTTCTGATCCCTCCATAAATACCCCTTGTATTCCTATCCCTTCTTCCTCTCACTTCATTCATTCACTCCTAACACACTTCTCTTCATCTTTTTTCAACTTTCCAAAACTTCAGAGAGACAAAGGAAAACCCATCAAAGTAACAAAAACCATAA


Gene Sequence:
>Vu_30721(+)
ATGCCATCACCAACCCCAAATGGAGACTCCAATCTCCCTCCCAATCACACCCCTCAACAATCCCGTGATATCCCTCCTTTTTTCTCTTCTTCTTATCCCATCACCCTTAAGGTATTTATCATTACATTATTGCTACCCATAATAACTATACGTATTAATCTTCCTTTCACTCACTAGTCATCACTTTGACTGTTCCTTTTTCCTCCTTTTGTGGAAAAAATTTAATACCTATTTATTGTCATGAGTTAATGTTTTCATGCAACGCAGTTCATGGACGTCGAATACCGCTTGAAGATAGAGGACAAAAAAAAGACCGGAGGGACCATCAAGACCTTCTTCACGCCCTCCGAATCATCGCCATCTCATCAAGGATCAAGCCCAGCCGTGCCGCAGGAGCGAGTTATTTTAAAAGGCGTCACGGGAATAGTACACCCCGGGGAGATCTTAGCGGTACTAGGCCCATCGGGAAGCGGAAAATCGACGCTCCTAAACGCGCTCGCAGGGAGGCTCCATGGGAACGGCCTCGCCGGAACAATCCTGGCCAACTCCAGCAAACTCAACAAATCGGTTCTTCGGAGAACCGGCTTCGTTACACAGGACGACATCCTCTACCCGCATCTCACGGTTCGGGAGACGCTGGTGTTCTGCGCTATGCTGCGCCTCCCTCGCGCGCTTCCGCGCGCGGCGAAGGTTGCGGCGGCGGAGTCGACCATCGCGGAGCTGGGGCTGAGGAAGTGCGAGCACACGATAATAGGAAACAGCTTCATCCGCGGCGTCTCCGGCGGGGAGCGGAAGCGCGTGAGCATCGCGCACGAGATGCTGGTGGACCCCTCGCTGCTGATCCTGGACGAGCCCACCTCCGGTCTGGACTCGACGGCGGCGCACCGCCTCGTGGTGACGCTTGGGTCACTGGCGAAGAAGGGCAAAAGTGTAATCACATCGGTGCACCAACCTTCCAGCCGTGTGTACCAGATGTTCGATAAAGTTGTGTTGCTTTCTGAAGGACAGTGTTTGTACTTCGGCAAAGGAAGCGACGCCATGCGGTACTTTCAGTCGGTTGGTTTCGCGCCGTCATTTCCGATGAATCCGGCGGATTTTCTACTCGATCTCGCAAACGGTACGTCACAGTTTCAATCGTTTCTATTTCTTAACGAATTACAGTTTAACTTGTTACAACTGCTTGTGGTGTGTCGGTTTCAATTGTTTTTGCTGTGTGTGTTTTTGATTGGTGTGAATTATTAGTGGTGAGTGATGTTGGCTTCCAAGGAAGTGTTTTTGTGTGTGTTTGTGATTGA