Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30763 LG8 40798555 40802014 PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of root meristem growth, hormone-mediated signaling pathway, protein phosphorylation, hormone-mediated signaling pathway, regulation of root meristem growth, protein phosphorylation, hormone-mediated signaling pathway, protein phosphorylation, regulation of root meristem growth, hormone-mediated signaling pathway
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, plasma membrane
Molecular Function   enables   peptide receptor activity, protein serine/threonine kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein binding, protein kinase activity, protein serine/threonine kinase activity, protein binding, protein kinase activity
SNP Position Effect Amino acid change
G/C 40798600 missense_variant p.Gln890Glu
A/G 40798775 synonymous_variant p.Ser831Ser
G/A 40798846 stop_gained p.Arg808*
C/A 40798886 missense_variant p.Trp794Cys
T/A 40798893 stop_lost p.Ter792Leuext*?
G/C 40798897 missense_variant p.Leu791Val
T/C 40799017 upstream_gene_variant
G/A 40799071 upstream_gene_variant
G/A 40799800 missense_variant p.Arg739Cys
T/A 40799834 synonymous_variant p.Thr727Thr
G/A 40800173 synonymous_variant p.Asp614Asp
G/A 40800320 synonymous_variant p.Ile565Ile
G/A 40800485 synonymous_variant p.Ile510Ile
G/C 40800764 synonymous_variant p.Leu417Leu
A/G 40801417 synonymous_variant p.Leu200Leu
A/G 40801661 synonymous_variant p.Ile118Ile
G/A 40801730 synonymous_variant p.Pro95Pro
A/T 40801805 synonymous_variant p.Gly70Gly
C/T 40801811 stop_gained p.Trp68*
G/T 40801903 missense_variant p.Leu38Ile

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30763.1
MESIVPRSVTALLFSMIFFCLTLTKVGVNCLSPDGQALLSLLPAAGPAATSSPVLSSWNPSSSTPCSWKGITCSPQGRVISLSIPDTFLNLSYLPPRLSSLSMLQLLNLSSTNVSGTIPPSFGQLFHLQLLDLSSNSLTGSIPAELGSLSLLQFLFLNSNRLTGSIPQHLSNLTSLEVLCLQDNLLNGSIPSQLGSLTSLQQFRIGGNPYLTGQIPSQLGLLTNLTTFGAAATGLSGAIPSTFGNLINLQTLALYDTEISGSMPPELGLCSELRNLYLHMNKLTGSIPPQLSKLQKLTSLLLWGNALTGPIPAELSNCSSLVIFDVSSNDLSGEIPGDFGKLVVLEQLHLSDNSLTGKIPWQLSNCTSLSTVQLDKNQLSGTIPWELGKLKVLQSFFLWGNLVSGTIPSSFGNCTELYALDLSRNKLTGSIPEEIFGLKKLSKLLLLGNSLTGGLPPSVANCQSLVRLRVGENQLRGQIPKEIGQLQNLVFLDLYMNHFSGSIPVEIANITVLELLDVHNNYLTGEIPSVMGELENLEQLDLSRNSLTGEIPWSFGNFSYLNKLILNNNVLTGPIPKSIRNLQKLTLLDLSYNSLSGGIPPEIGHVTSLTISLDLSYNSFTGEIPESVSALTQLQSLDLSHNMLYGEIKVLGSLTSLTSLNISYNNFSGPIPVTPFFRTLSSNSYIQNPELCQSIDGATCSSSLIRKNGLKSAKTIALITVILASVTIILIASWILVTRNHGYKVEKTLGASTSTSGTEDFSYPWTFIPFQKVNFSIEYGYSMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGQHIVEWVKRKMGSFEPVISILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPSERPTMKEVVALLMEVKSQPEEMGKTSQPLIKQSLNQN*


CDS Sequence:
>Vu_30763.1
ATGGAAAGCATTGTTCCCCGGAGTGTTACCGCTTTGTTATTTTCCATGATATTTTTCTGCCTCACCCTGACAAAGGTAGGAGTCAATTGTCTCTCACCCGATGGACAAGCCCTTCTTTCTCTTCTGCCTGCTGCAGGCCCTGCTGCAACATCATCACCTGTTCTCTCCTCATGGAACCCATCAAGCTCAACACCATGTTCATGGAAAGGTATCACTTGCTCCCCACAAGGTAGAGTAATCTCCCTCTCTATTCCAGATACTTTTCTCAACCTCTCCTATTTACCCCCTCGGCTATCCTCTTTATCAATGCTTCAACTTCTCAATCTCTCTTCCACCAATGTCTCTGGCACCATTCCACCCTCTTTTGGTCAACTTTTCCATCTTCAGCTGCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATACCTGCTGAACTTGGAAGCCTCTCTTTACTTCAATTCCTTTTCTTGAACTCCAACAGATTGACAGGAAGCATTCCTCAACATCTTTCTAATCTCACTTCACTTGAAGTTCTCTGCCTCCAAGACAATCTTCTCAACGGTTCAATCCCATCACAGCTAGGCTCCTTGACATCATTGCAGCAGTTTCGGATAGGGGGAAATCCATATCTCACTGGACAAATCCCTTCACAGTTAGGCCTACTCACCAACCTCACCACTTTTGGTGCAGCTGCCACGGGACTTTCTGGTGCCATTCCCTCTACATTCGGTAACTTGATCAATCTACAGACTCTAGCACTTTATGATACTGAAATTTCTGGCTCAATGCCACCAGAGCTTGGGTTGTGTTCTGAGCTGAGAAATCTGTATCTGCACATGAATAAGCTCACTGGTTCTATCCCTCCACAATTGAGCAAGTTGCAAAAACTTACTAGCTTGCTACTTTGGGGCAATGCCTTAACTGGTCCAATCCCAGCAGAGCTTTCCAACTGTTCATCACTTGTTATATTTGATGTCTCTTCTAATGACCTCTCTGGGGAAATACCGGGGGACTTTGGGAAGCTGGTGGTTCTGGAACAGCTTCATCTATCTGATAATTCACTCACAGGTAAAATACCATGGCAGTTGAGCAACTGTACCAGCCTTTCTACTGTTCAGCTCGACAAGAATCAGTTATCAGGTACTATTCCCTGGGAGTTAGGTAAATTAAAGGTTCTACAGAGCTTTTTCTTATGGGGTAATCTAGTGTCTGGAACCATACCATCATCCTTTGGAAACTGCACAGAGCTCTACGCACTTGATCTTTCAAGGAATAAGCTAACAGGTTCTATACCAGAAGAGATTTTCGGCTTGAAGAAGCTGAGTAAGCTTCTGCTTCTGGGCAATTCATTAACAGGAGGATTGCCACCAAGTGTTGCAAATTGCCAGTCTTTGGTGAGGTTGAGGGTTGGAGAGAACCAGCTCAGAGGCCAGATTCCTAAAGAGATAGGTCAATTGCAGAATCTGGTGTTTCTCGACCTGTACATGAATCATTTCTCTGGAAGCATACCAGTGGAGATTGCTAATATCACAGTTCTTGAGCTGTTAGATGTTCACAACAACTACCTCACTGGGGAAATTCCATCTGTGATGGGGGAGCTTGAAAATTTGGAGCAGCTTGATCTCAGTAGAAACAGTTTGACAGGAGAAATTCCTTGGAGCTTCGGAAACTTCAGCTATTTGAACAAGCTCATCCTCAACAATAACGTACTGACAGGACCAATCCCAAAATCCATTAGAAATTTGCAGAAGTTAACTCTTCTGGATTTGAGTTACAATAGCCTCTCTGGTGGAATACCCCCAGAGATTGGTCATGTTACAAGCTTAACCATCAGCTTGGACTTGAGCTACAATTCATTTACAGGAGAAATCCCAGAATCAGTGTCTGCTTTGACACAGTTACAATCACTTGATCTTTCTCATAACATGCTTTATGGAGAAATCAAGGTTCTGGGGTCTCTCACTAGCCTCACCTCTCTCAATATCTCCTACAACAATTTCTCAGGTCCTATCCCAGTAACTCCATTCTTCAGAACACTATCCTCCAATTCATATATCCAGAACCCTGAGCTTTGTCAGTCCATTGATGGGGCTACCTGTTCTTCTAGTCTGATTCGAAAAAATGGTTTGAAATCTGCAAAAACCATTGCTTTGATCACAGTCATTCTAGCCTCGGTTACAATAATTCTCATTGCTTCCTGGATTCTAGTAACTCGTAATCATGGATACAAGGTTGAAAAAACATTGGGGGCATCAACTTCCACATCAGGAACTGAAGATTTCTCTTACCCTTGGACTTTCATCCCATTTCAGAAAGTAAACTTCAGCATCGAATATGGCTACTCCATGAACATAACAGAGAAGAGTGATGTCTATAGTTATGGGGTGGTTTTGCTAGAGATTCTAAGTGGTCGCAGTGCTGTCGAATCCCATGTTGGAGATGGGCAACACATAGTGGAATGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGTTATATCAATACTAGACACAAAGCTGCAAGGTCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGTGTGAACTCTTCCCCATCAGAGCGCCCCACAATGAAGGAAGTGGTTGCACTACTAATGGAGGTGAAGAGCCAGCCTGAGGAGATGGGCAAGACCTCTCAACCTCTAATAAAACAGTCCTTAAATCAAAACTGA


Promoter Sequence:
>Vu_30763::LG8:40802014-40804014(-)
AAAAAAGAAAAGAATTTGCCATGTTATGAACCCGTAGTCCTGCTCTGAGTGGTGCAAGGGCACTGGTTATCTGAGAATATCATAGTTACCATTCCAATAGGTTCCGAATTCTAAAATTTTGTGACATTTATGAGAGACAAGCCTCGTGCAGGTGAAAAATTAGAAAACAGTCAAAACCTAAAGCTAAATAAAAACCCTAATCGTTACCTGTGCCCTAATTTATTCCAAAAACCCCTCTCTGTCATGTGACATACAATTTTCTTTTGCTCCACTCCCAAAACAAACCCACCTCCTCCTCCTCGGTAACCAAATCACTCTTCCCTTTCTTAATCCAATCTTCAAACACTAATCACTCACACTGTTAAAAAAGCATAAACAAACAATGTAAAACTTACAAAATTTACATACCACTTTCACCCCTCCCACGTAGGAATTCCTCTGTTACTACGCTACCTTACCCTTCATGCCCTTTTAAAATAACAAGTGTTACTTCCTTAAAACCAAGGCCACGTTTAATGATGCTTGGTTTATGCAAAGAAAAAGACATTGAAGTTGTTTTTCCTACTCTAAACTTTTAACCTTTCACGATCTCCTAAGCTGCCTCTCTTCTTATATTATCATCAAAGTGCTCTTCCTCTTCCCAAGAAGGCAATCTTACTGCCATGCCAACGCCATGGACACATTTGCACATAAAGCTCTGAATCTCTTGCATTGTCCCAATCGGAGCTCTTACCAGCAGATTTTAGATAGATGAAACTTATCCACAATGCCTAATTTTGTCACATTCATGCAAGTACTGTTTTTCATTTTATATAAAACCTTGATAAATTCATGCAGGTCTACTTAGGGCCTTTTGTCCTTTTAGGTATCACTTCTTTACATCAAAGTTGTTCTCATTGTCACAAGCCTCACAGTTTTTCACTTAAGAAATTGATGACACTTTTAATTTAAAATCTTGATACATTAAGTTTATGAATATTTTTTAATATGGTATTTAACTTTGATATTTCATTTAAACTTATTTTTGTATTATTTGAAATTTAATTGGAGTACTTTACACTGTTGAAAGTGTATCCAAGTTAAATTTAATAGATATTTGGCATGTATTTTTATGAATTAAACTACTCAAATTTGTAGGTTATGTAGTTACAGGATACATCAATGGCGTGAGAATTTTGGTCCGTGGCACTACAGCAGGTACAAGAACAAACAGGGAAGCCCCACTCCTCCCTAAATAGTAAGATAATGAAAGGGTAAGGGAGTGTCAGTGAGTGATAGGAGAACAATTTGGTTTTTGTAAGAGGGCAATATCTCAATTCACAGACTACATATCCTACATAATGGAGGGTCAATTTGGTACATGTACACAACAATGAATACAGCCAAACAACGAAGTTAGAACTACACTAACTACTATTTAAATGTAAAAGAGATATTGAGAGTGGAGGTTTTCAAAGTGCATTGAACTCAGAAAAGCTCAGCCACCGCACTTACCACCGCTGAGGTATTCTCCTTTGTTATTATTACCTGTAAGCAGTCACGCGAATCATGGAAACCAACAACAGTGCATGCACCACAAGTGCCAGAACTTAGATGGCCATGCCACCATTTCCACCACCATTTGCATAGCATCAGAAGAGCCAGAAGCATCATCAGAAGCCTAGCTTTGATTCTACCATTTGGTAGTAGTGAGAGCAGAGCCACTTTCTGGGGTAAGAGGGAAATAGATTGCATTCTTCACTGTCTATCTCAGCTATTCAATCTTCCTAAAGATAATGATGCAGTCTTTCACATGCTAGTATTGAAAACGCTAGTGTGAAACTTAAGCAATAGAGACCCTCTTTCACATGCACTTGGTCTCCTAGAGTGGACTTTCTTCAGCTCCAGCTTCACCGATTACCATCATTCAACAGCTGCAAGACTGACGTGGTGACACTATAACCAACACTCCATTAGACCAAGTTCTTAATCTCCAAAACCAAGCCATTTTCGTAGTCCTA


Gene Sequence:
>Vu_30763(-)
ATGGAAAGCATTGTTCCCCGGAGTGTTACCGCTTTGTTATTTTCCATGATATTTTTCTGCCTCACCCTGACAAAGGTAGGAGTCAATTGTCTCTCACCCGATGGACAAGCCCTTCTTTCTCTTCTGCCTGCTGCAGGCCCTGCTGCAACATCATCACCTGTTCTCTCCTCATGGAACCCATCAAGCTCAACACCATGTTCATGGAAAGGTATCACTTGCTCCCCACAAGGTAGAGTAATCTCCCTCTCTATTCCAGATACTTTTCTCAACCTCTCCTATTTACCCCCTCGGCTATCCTCTTTATCAATGCTTCAACTTCTCAATCTCTCTTCCACCAATGTCTCTGGCACCATTCCACCCTCTTTTGGTCAACTTTTCCATCTTCAGCTGCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATACCTGCTGAACTTGGAAGCCTCTCTTTACTTCAATTCCTTTTCTTGAACTCCAACAGATTGACAGGAAGCATTCCTCAACATCTTTCTAATCTCACTTCACTTGAAGTTCTCTGCCTCCAAGACAATCTTCTCAACGGTTCAATCCCATCACAGCTAGGCTCCTTGACATCATTGCAGCAGTTTCGGATAGGGGGAAATCCATATCTCACTGGACAAATCCCTTCACAGTTAGGCCTACTCACCAACCTCACCACTTTTGGTGCAGCTGCCACGGGACTTTCTGGTGCCATTCCCTCTACATTCGGTAACTTGATCAATCTACAGACTCTAGCACTTTATGATACTGAAATTTCTGGCTCAATGCCACCAGAGCTTGGGTTGTGTTCTGAGCTGAGAAATCTGTATCTGCACATGAATAAGCTCACTGGTTCTATCCCTCCACAATTGAGCAAGTTGCAAAAACTTACTAGCTTGCTACTTTGGGGCAATGCCTTAACTGGTCCAATCCCAGCAGAGCTTTCCAACTGTTCATCACTTGTTATATTTGATGTCTCTTCTAATGACCTCTCTGGGGAAATACCGGGGGACTTTGGGAAGCTGGTGGTTCTGGAACAGCTTCATCTATCTGATAATTCACTCACAGGTAAAATACCATGGCAGTTGAGCAACTGTACCAGCCTTTCTACTGTTCAGCTCGACAAGAATCAGTTATCAGGTACTATTCCCTGGGAGTTAGGTAAATTAAAGGTTCTACAGAGCTTTTTCTTATGGGGTAATCTAGTGTCTGGAACCATACCATCATCCTTTGGAAACTGCACAGAGCTCTACGCACTTGATCTTTCAAGGAATAAGCTAACAGGTTCTATACCAGAAGAGATTTTCGGCTTGAAGAAGCTGAGTAAGCTTCTGCTTCTGGGCAATTCATTAACAGGAGGATTGCCACCAAGTGTTGCAAATTGCCAGTCTTTGGTGAGGTTGAGGGTTGGAGAGAACCAGCTCAGAGGCCAGATTCCTAAAGAGATAGGTCAATTGCAGAATCTGGTGTTTCTCGACCTGTACATGAATCATTTCTCTGGAAGCATACCAGTGGAGATTGCTAATATCACAGTTCTTGAGCTGTTAGATGTTCACAACAACTACCTCACTGGGGAAATTCCATCTGTGATGGGGGAGCTTGAAAATTTGGAGCAGCTTGATCTCAGTAGAAACAGTTTGACAGGAGAAATTCCTTGGAGCTTCGGAAACTTCAGCTATTTGAACAAGCTCATCCTCAACAATAACGTACTGACAGGACCAATCCCAAAATCCATTAGAAATTTGCAGAAGTTAACTCTTCTGGATTTGAGTTACAATAGCCTCTCTGGTGGAATACCCCCAGAGATTGGTCATGTTACAAGCTTAACCATCAGCTTGGACTTGAGCTACAATTCATTTACAGGAGAAATCCCAGAATCAGTGTCTGCTTTGACACAGTTACAATCACTTGATCTTTCTCATAACATGCTTTATGGAGAAATCAAGGTTCTGGGGTCTCTCACTAGCCTCACCTCTCTCAATATCTCCTACAACAATTTCTCAGGTCCTATCCCAGTAACTCCATTCTTCAGAACACTATCCTCCAATTCATATATCCAGAACCCTGAGCTTTGTCAGTCCATTGATGGGGCTACCTGTTCTTCTAGTCTGATTCGAAAAAATGGTTTGAAATCTGCAAAAACCATTGCTTTGATCACAGTCATTCTAGCCTCGGTTACAATAATTCTCATTGCTTCCTGGATTCTAGTAACTCGTAATCATGGATACAAGGTTGAAAAAACATTGGGGGCATCAACTTCCACATCAGGAACTGAAGATTTCTCTTACCCTTGGACTTTCATCCCATTTCAGAAAGTAAACTTCAGCATCGGTAATATCTTGGATTGCTTGAAGGATGAAAATGTGATTGGAAAGGGCTGCTCAGGTGTTGTGTACAAGGCTGAGATGCCAAATGGGGAGTTGATTGCTGTAAAGAAGCTTTGGAAAGCAAGCAAAGCAGATGAAATAGTGGATTCTTTTGCTGCAGAGATACAGATTCTTGGATACATTCGGCATAGGAACATAGTGAGGCTCATAGGTTATTGTTCTAACAGGAGCGTTAATCTTCTTCTCTATAACTACATCCCAAATGGTAATCTGCGACAGCTTTTACAAGGGAACAGGAACTTAGACTGGGAAACAAGATACAAGATTGCTGTCGGATCAGCTCAAGGTCTAGCTTACCTTCATCATGATTGCGTACCTGCAATTCTCCATAGAGATGTCAAGTGCAATAACATACTTCTAGACTCCAAATTTGAGGCATATCTGGCAGATTTTGGTCTTGCAAAGCTAATGCATTCGCCAAATTATCATCATGCAATGTCCAGAGTTGCTGGTTCCTATGGTTATATTGCCCCAGGTAAGTCCGTTTAGCTTGCTTTACTTTCTCGAACCTTTCTTACATCCTTTACATAATTGATAAAACCAACGCCCTTAATACTTAGGCTATTGGTTTAAATGTAGAAAAAATGTGCACACATTCAATTGAAGCCCAGGAATATATGGACATCCATATTTTATCATTTAGTGGTGCTATTGGTTTAAAACTAACCATGTTTTTATCACTAACGCAGAATATGGCTACTCCATGAACATAACAGAGAAGAGTGATGTCTATAGTTATGGGGTGGTTTTGCTAGAGATTCTAAGTGGTCGCAGTGCTGTCGAATCCCATGTTGGAGATGGGCAACACATAGTGGAATGGGTGAAGAGGAAGATGGGAAGCTTTGAACCAGTTATATCAATACTAGACACAAAGCTGCAAGGTCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGTGTGAACTCTTCCCCATCAGAGCGCCCCACAATGAAGGAAGTGGTTGCACTACTAATGGAGGTGAAGAGCCAGCCTGAGGAGATGGGCAAGACCTCTCAACCTCTAATAAAACAGTCCTTAAATCAAAACTGA