Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30916 LG8 42429042 42432472 PREDICTED: U-box domain-containing protein 32 isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to salicylic acid, carbohydrate derivative metabolic process, protein phosphorylation, response to blue light, protein phosphorylation, protein ubiquitination, protein phosphorylation
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, protein kinase activity, ATP binding, protein kinase activity, ubiquitin-protein transferase activity, ubiquitin-protein transferase activity, ATP binding, protein kinase activity
SNP Position Effect Amino acid change
T/A 42429555 intron_variant
G/T 42429934 synonymous_variant p.Pro348Pro
G/T 42430165 stop_gained p.Cys271*
C/T 42430166 missense_variant p.Cys271Tyr
A/G 42430171 synonymous_variant p.Asp269Asp
C/T 42430173 missense_variant p.Asp269Asn
T/G 42430174 synonymous_variant p.Thr268Thr
C/A 42430179 missense_variant p.Ala267Ser
A/G 42430183 synonymous_variant p.Ser265Ser
C/T 42430186 missense_variant p.Met264Ile
T/G 42430211 missense_variant p.Asn256Thr
G/A 42430246 synonymous_variant p.Gly244Gly
T/A 42430255 synonymous_variant p.Leu241Leu
C/T 42430261 synonymous_variant p.Glu239Glu
C/T 42430277 missense_variant p.Arg234Lys
C/T 42430282 synonymous_variant p.Glu232Glu
A/T 42430471 intron_variant
A/G 42430792 intron_variant
A/C 42430813 intron_variant
T/C 42431014 missense_variant p.Tyr179Cys
A/C 42431015 missense_variant p.Tyr179Asp
A/G 42431043 synonymous_variant p.Asp169Asp
T/G 42431277 missense_variant p.Glu91Asp
C/G 42431279 missense_variant p.Glu91Gln
G/C 42431288 missense_variant p.Leu88Val
G/A 42431315 stop_gained p.Gln79*
A/T 42431317 stop_gained p.Leu78*
G/A 42431628 intron_variant
G/A 42432378 missense_variant p.Thr32Met

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30916.1
MKEIQSISSNRSLNTKWSFNKVMDRSKLPDLTFHEDEAFESQCAQEIRRRKEVEEQLARSKQEVQKMKNQQDEILEELQMVKDQNSALMNEISESQFTVTEFEEKIISAVDLLISFREKRDRLRIEHANAVREVQVLRTFGEADTPFSYQVEFPAFSFVEINEATHDFDPSWKIGEGRYGSVYKGLLRNMHVAIKMLPSYGQESPSKFQHQVEVLSRVRHPNLLTLIGSCAESRSLVYEYLNNGSLESHLARKEKNPLPWQIRMSIATDICSALIFIHSSKPCIIHGNLKPSKVLLDANFVAKLSDLGIPSLVQQSLDSADANTIYNNPNERLAYVDPEYFVNGKFTPESDVYSFGVILLQLLTGRPLLGLVRDVKCALEKENLKAVLDFSAGEWPLCQTELLAYLALRCCEKNWLNRPDLVSEIWSVLEPFKAIRIDKPYLISKKLRRVPSHFVCPIVQEVMEDPYIAADGFTYEEEAIRGWLNSGHDTSPMTNLKLDHTDLVPNYALHNAILEWQQQ*


CDS Sequence:
>Vu_30916.1
ATGAAAGAAATCCAAAGTATCAGTTCCAACCGTTCCTTAAATACAAAATGGTCCTTTAATAAGGTCATGGACAGGTCAAAGTTGCCAGATTTGACGTTTCATGAGGATGAAGCATTTGAAAGCCAGTGTGCTCAGGAAATAAGAAGAAGAAAAGAAGTTGAAGAACAATTGGCAAGGTCAAAGCAAGAAGTACAGAAAATGAAGAATCAGCAGGATGAAATACTTGAAGAATTGCAAATGGTCAAAGACCAAAATTCTGCACTTATGAACGAAATTTCTGAGTCCCAGTTTACGGTAACAGAGTTTGAGGAGAAGATCATATCAGCTGTGGACCTTCTGATAAGTTTCAGGGAAAAGAGAGATAGGCTTAGAATAGAGCATGCAAATGCAGTTAGGGAAGTCCAAGTGCTTAGAACATTTGGTGAAGCGGATACTCCCTTCTCTTATCAGGTAGAATTCCCTGCATTTTCTTTTGTGGAGATCAATGAGGCAACTCATGATTTCGATCCGTCTTGGAAGATTGGAGAGGGAAGGTATGGAAGTGTTTACAAGGGACTGCTTCGCAACATGCATGTTGCCATAAAAATGTTACCCTCTTACGGTCAAGAGAGTCCATCAAAATTCCAACATCAGGTAGAGGTCTTGAGTAGGGTAAGACATCCAAATTTGTTAACACTAATTGGAAGCTGTGCAGAGTCTAGGTCACTTGTGTATGAGTACCTAAACAATGGCAGCCTTGAAAGCCACCTTGCCCGCAAAGAAAAGAATCCACTTCCATGGCAAATTCGAATGTCTATTGCTACAGATATATGCTCTGCTCTAATCTTCATTCACTCCAGCAAGCCTTGCATTATCCATGGGAATTTGAAACCTAGTAAAGTTCTCCTCGATGCTAACTTTGTTGCCAAACTGAGTGACTTGGGCATTCCTAGTTTAGTTCAGCAAAGTTTGGATTCAGCTGATGCAAACACAATATATAATAACCCAAATGAACGTTTGGCGTATGTGGATCCAGAGTATTTTGTCAATGGCAAGTTTACACCCGAATCAGATGTATATTCATTTGGAGTCATATTGTTACAACTTCTAACTGGAAGACCACTTTTGGGGTTAGTAAGGGATGTGAAGTGTGCATTGGAAAAGGAAAACCTTAAAGCAGTCTTGGATTTTTCAGCTGGTGAATGGCCACTTTGTCAAACTGAACTGCTGGCATATTTAGCACTGAGGTGTTGTGAAAAAAATTGGTTGAACAGGCCAGACCTTGTGTCTGAAATTTGGAGTGTTCTGGAACCATTCAAAGCTATTCGCATTGACAAACCATATTTGATTTCAAAGAAGCTTCGTCGTGTTCCTTCACATTTTGTCTGCCCCATTGTCCAGGAAGTAATGGAAGATCCATACATAGCTGCAGATGGCTTTACGTATGAAGAAGAGGCAATAAGAGGGTGGCTGAATAGTGGCCACGACACTTCCCCCATGACAAACCTCAAGCTTGATCACACGGATTTGGTACCTAACTATGCTCTACATAATGCAATTCTGGAGTGGCAACAACAGTAA


Promoter Sequence:
>Vu_30916::LG8:42432472-42434472(-)
TTGCATTGTGTTAGGGGGTTCCTTCTAACGTTCAACCATTCTGCATATAGTTTTTTTATGGGGGGTTTTCATTTCAGATATGCCTAGATATTGGACTGTTATGCTTCATTGACGGCATTTTCCTTTTTTAGAAAGTTTCTACCTTAATACCCACCATACTACATTGGTGTTCATGTTGGGTCACCAGTATTAAAAAGAGTTATGACTAGAAAGTACCACTTGGCTTGAGGATATTGACAAGAGATCTGAAGTGAAACTTCCATAGTGTTCAACAAAGTTTATAATATATGTACTATGTAAAAGAGTGAAGCAGAGTACGACATCCAAATAAAATTCCTGTTTCTGTCTGGTTAAATGAAAATTTGCTTCATGAGTTTGCTTTCAACTCTAAATTAGAGCTGTGTTAATTTGCATCTTTTATTTCATTACTAAACTATAGTGGTTGAAATTGCAGCAAACTGGCAAAGCAAGATTCGGAGAAGGCTATTTTTATACGCGAACAAGCATTGCTATCATGTAATATTTGGTTCATTTGCAAGGGCAGCCTCATATGTACTAGGTAAAATGTAAATGAAAATGATAAATGTATTGCAATGACATGATTCTAATATATGGTCAGTCATTCTGCTTCTTTATCATCTGATAACTAGGCTTAGGACTGTCACAAAAAGGAAACCCCTTGAAAAGAGAATTTTCTCAATTTTTGTTGGTAATTAAATGAACAGCACTACTGAGTATTCTTTTTCCTTGTCACTGTTTTTTTTTTCAACTACTTTACTGAAAATTCAGAGAATATGAGGAGTGAATCACGCTCATTGAGCATTCCATAACTATCAAATTTGAAAAAAAATCCATCACACTATTATTTAAGAAGTCTAACGGTCAGATCTTTTAAATTTGATCATTCGTAAAATATCCAATGTTCATTACGCATTGCTAATTTTTTCCAAGATTTATAAGTTTGCCCATGTTGGGCTAGGGGATGGCTTTTTGATTCATTAATGTCCATCTGTAGCTCAAATTTCAGAAGAATTTGACTGCAGTCAGTATTTAGTCATTTAGTTTGTATATTCTTACATATGAAGAGTATACTAGACTCTAATGATAGCTTTCATGTATGAAGTATGACTTAGTTTCAGATTAATAATTTAATATATCTATTATTAAGATGATCTAGAAAAGGGACCTTTAAATCTAGTTGTGTATTTTGTGAAATATTCATTTATAAAAAATGTTATGTAATGAATTTTGATTGATTTTATTTTTATCTTAGTGCCAAAAAATTGTGATTCTTAAAGCTTTGGCTTTTAACCAAGTTAAATGGCATTGTTGTGTAATCTATATATTGAAAAAAGTGATCTTATGTTCTGGAAGTGTTGAAGAATATAGTATAAAATAAGTTATTACCCTTGTGGTAGGACGTTAGAGAGTGACAGGTGATGCTTTGGTGGACAAAAATAGGTAAAGAAGAAAACATTAATTTTATTTTGTTGACAATTTACTAAATGAATTGTGTATCACATTCGGAGCGTGGATGAGTAGAAAGGCAAACTCAATGGTTCTGTAAAGCAGAAAGGACCTTATACTCCCACTAATCATGTTGTTTTCATTTAAACGACCTTATTACAAGTTTTGATCTTTCACTTAGATTTTTTTTCATCATATTCTGTAATATTGGCAACAACTTCTTTAGCTGATAATTTGTTCTATATCTTCCACTTTTATGAAATGCACAAATTAAATCAGGGTATATAGCAAGCATACTTCTGACATAGAGGGTGGGCCTGCATTGTTGGTGCTCAATTCAAATACAGAAAAGTCTACATCGAAATCGACTCTAGATGCATTGAAATATTTAGGTATTCTTTTTAGATGTTTCTTTTCTATGTTTGTTATCAATTTAGAATGGCATAGCTATTCTTCAGATCAGGCCATTTATCAATTTCTATAAGGACTGTCAGGGGAATAACTGTTGACAGGTTTCTGCAGATTCTGGTGAT


Gene Sequence:
>Vu_30916(-)
ATGAAAGAAATCCAAAGTATCAGTTCCAACCGTTCCTTAAATACAAAATGGTCCTTTAATAAGGTCATGGACAGGTCAAAGTTGCCAGATTTGACGTTTCATGAGGTGAGAGGTGATTTTTCTGCTTTAACCTTGGTGTAAAAGTTTATTCTTTTTATACTTTACACTTTCTCGTGTGCTTCTACACTTTAGTGGTAGGACTGTAAGAATTTTTTTTCCTATGTCAACACTTGAAAGTTTTGATTTCTTGTGAATAAGATCAGAGCGTGTATCAGAGGGGTTTTCAAGTTTGGTATTGTCTCTTATTCTAAAAATATATTTGTTTCAATCCGTAGTCTGGCATCTTCCATCTGATTTAATTTTTTTTTACTGGTGGGATTAGAAGAAGCAAAATAAATGGTACACCACCGCTGATGCCAAGAGCATGAAACCAAAATGGGTATGGAGTGGCATTAAAGGCTGATAATAATAGAGAAAAAATGGAGTGACATTAAAGAGATGGAAAATAGAAAATAGTTCTATCAAGATTTATAATAAACACAATTTTCATTGCTTAAATATAAAAAATGATATATTTTTTCTTCTAATGGTCTCTCTGATTTGGTTTCTCAAATTTTGCTCGATGGTTACTATTTGGAGTATAAGTATTATTTCTTAAAAATAAGAAAAAAGATAATTACGCCCCTGTTTCCAATTCTTTTTCTATATCAATCTTAGCTTTATACTTGAATTTCAATGGAGAAAGATCTTTTGGACTATTTACTCTTAATTAATTCAGACTGTCAGGCACACTACCTTCATCACCTGAATCCCTTATCATTGTTACTTTATGTATATGGCACTACGGGACGTGAAAGCCCAAATCTCAGATAAATAGAATAGTCAGCTCAATGCAGCTAATTGATATACTTGTTCGTATGGATAGATGTGTATAATATATGTTTGCATGAATTGCTGTCTGATTATTGATGAACTAAAGTGATTACCAGTTTTCTTCTGAAACTAGTTTCAAATTGCATTTTTGACAGGATGAAGCATTTGAAAGCCAGTGTGCTCAGGAAATAAGAAGAAGAAAAGAAGTTGAAGAACAATTGGCAAGGTCAAAGCAAGAAGTACAGAAAATGAAGAATCAGCAGGATGAAATACTTGAAGAATTGCAAATGGTCAAAGACCAAAATTCTGCACTTATGAACGAAATTTCTGAGTCCCAGTTTACGGTAACAGAGTTTGAGGAGAAGATCATATCAGCTGTGGACCTTCTGATAAGTTTCAGGGAAAAGAGAGATAGGCTTAGAATAGAGCATGCAAATGCAGTTAGGGAAGTCCAAGTGCTTAGAACATTTGGTGAAGCGGATACTCCCTTCTCTTATCAGGTAGAATTCCCTGCATTTTCTTTTGTGGAGATCAATGAGGCAACTCATGATTTCGATCCGTCTTGGAAGATTGGAGAGGGAAGGTATGGAAGTGTTTACAAGGGACTGCTTCGCAACATGCATGTTGCCATAAAAATGTTACCCTCTTACGGTCAAGAGAGTCCATCAAAATTCCAACATCAGGTAATTTCATGTTATCTGTTACAGTGTCTACTTGAAAGTCTGAAATTAGACTAGAAAATATGCTCATTACGCACCTCCCACCAAAATTATTCAGAAGATTTTTTGGGCCTTACATGATTAATACTTGTCATCTCTACCATTTTGGAACAGTTGCACATATATTATACTATAATACAACATAAACACTTCATAAATTATCCTACCTGATTCGATATCTGAAGATTTTTGGATAATTTGATGTATTTTTGAGCGAAAGGAATTATTGACATGGTGTCTATGACTCTTTTCCTTCTCTTTTCTTATAAATAAGTTGTAAGTCTCCATAGTCCAGAGATCTATTTTATTTTCACTTTATAGTTTGGTCCAATTGGTTCCCGTTTTCAGATTAATGTATGCACACACACACACACACACCATAATTCCAAGCTTCTGATCTTCAAGTATGTTTGAAATTAAACTATGTTAGCGATTGATCCAAAAAGGCTTGACTGAATACTTCTGTCATAGGTTGTGTGTGCATGAGGAACTCACTTTTTTATCGTTGTCTGGCTATATTATTGGTTGAATTTCAGGTAGAGGTCTTGAGTAGGGTAAGACATCCAAATTTGTTAACACTAATTGGAAGCTGTGCAGAGTCTAGGTCACTTGTGTATGAGTACCTAAACAATGGCAGCCTTGAAAGCCACCTTGCCCGCAAAGAAAAGAATCCACTTCCATGGCAAATTCGAATGTCTATTGCTACAGATATATGCTCTGCTCTAATCTTCATTCACTCCAGCAAGCCTTGCATTATCCATGGGAATTTGAAACCTAGTAAAGTTCTCCTCGATGCTAACTTTGTTGCCAAACTGAGTGACTTGGGCATTCCTAGTTTAGTTCAGCAAAGTTTGGATTCAGCTGATGCAAACACAATATATAATAACCCAAATGAACGTTTGGCGTATGTGGATCCAGAGTATTTTGTCAATGGCAAGTTTACACCCGAATCAGATGTATATTCATTTGGAGTCATATTGTTACAACTTCTAACTGGAAGACCACTTTTGGGGTTAGTAAGGGATGTGAAGTGTGCATTGGAAAAGGAAAACCTTAAAGCAGTCTTGGATTTTTCAGCTGGTGAATGGCCACTTTGTCAAACTGAACTGCTGGCATATTTAGCACTGAGGTGTTGTGAAAAAAATTGGTTGAACAGGCCAGACCTTGTGTCTGAAATTTGGAGTGTTCTGGAACCATTCAAAGCTATTCGCATTGACAAACCATATTTGATTTCAAAGAAGCTTCGTCGTGTTCCTTCACATTTTGTCTGCCCCATTGTCCAGGTGAACATCATACATTTTTTCCAAATGCACTTTTTAAAAAAAATAAAATTGCTTGCCTTTGAAGCTCCGGATGGATTAGCGACCCTTACAACTTCATCTTATCCAATAACTGCCCCCAAATCTAGTTGAATTCTATCCCAAATCTAGTAGAATTCTATCAAAATTCTGACTCAGTTTTGTTGTGCAGTTTTAACACTAAGTTTTTATAAGCAATTAAGGTGTCTGGTTATTCTTTTCTCCTCCACCTCCTCATCTTACTAATTAGCAGCTGTTGTAGCATATGCGAATTATTGCAATCACAAGTTAAAACATTGGGTTTCCGCGGGATTGCTTTCCTGTTTGTGATAATCATAACATTTACCTTTTGGTTTTACAGGAAGTAATGGAAGATCCATACATAGCTGCAGATGGCTTTACGTATGAAGAAGAGGCAATAAGAGGGTGGCTGAATAGTGGCCACGACACTTCCCCCATGACAAACCTCAAGCTTGATCACACGGATTTGGTACCTAACTATGCTCTACATAATGCAATTCTGGAGTGGCAACAACAGTAA