Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_30970 LG8 43013681 43014286 PREDICTED: dehydration-responsive element-binding protein 1E-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of gene expression, regulation of transcription, DNA-templated, response to water deprivation, regulation of transcription, DNA-templated, response to water deprivation, cold acclimation, response to cold, response to cold, response to cold, response to cold, regulation of transcription, DNA-templated, response to water deprivation, response to water deprivation, response to cold, response to cold, response to cold, response to water deprivation, regulation of transcription, DNA-templated, response to water deprivation, response to cold, cold acclimation
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, cis-regulatory region sequence-specific DNA binding, cis-regulatory region sequence-specific DNA binding, protein binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/G 43013764 synonymous_variant p.Ala28Ala
G/A 43014010 synonymous_variant p.Arg110Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_30970.1
MFSTDPQATSPDSGGSRPALSDEEVFLAASHPKKRAGRKKFRETRHPVFRGVRRRDSGKWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAALALRGRSACLNFADSANRLPVPATADPRDIQKAAAEAAEAFRPGNESGKDDDAVVETVATATESVEEKEMEDLRNMVLMSPTHCFESDEYGSTEMEFEDIEVSLWSYSL*


CDS Sequence:
>Vu_30970.1
ATGTTTTCCACCGACCCACAAGCGACCTCGCCGGACTCGGGAGGTTCCCGTCCGGCGCTGTCGGACGAGGAGGTGTTTCTGGCAGCGAGCCACCCCAAGAAACGCGCTGGGAGGAAGAAGTTCCGGGAGACGCGCCACCCGGTGTTCCGCGGCGTCAGGCGGAGGGACTCCGGTAAGTGGGTGTGCGAGGTGCGCGAGCCCAACAAGAAGACTAGGATTTGGCTGGGGACCTTTCCTACGGCGGAGATGGCGGCGCGTGCACACGACGTGGCTGCGCTGGCGCTTAGGGGAAGGTCGGCCTGTCTCAACTTCGCCGACTCCGCGAATCGGTTACCGGTGCCGGCGACGGCTGATCCCCGGGACATTCAGAAGGCGGCGGCAGAGGCTGCAGAGGCGTTTCGGCCCGGTAACGAATCGGGAAAGGATGATGATGCGGTGGTGGAGACCGTGGCGACAGCGACGGAGAGTGTTGAAGAAAAAGAGATGGAGGATCTGAGGAACATGGTGCTGATGTCGCCAACCCATTGCTTCGAGAGTGATGAATATGGAAGTACGGAAATGGAATTTGAAGACATTGAAGTTTCGTTGTGGAGTTACTCACTCTAA


Promoter Sequence:
>Vu_30970::LG8:43011681-43013681(+)
GGAATCGAAGAGACACGACTAGAAGCTGCATGGACCCAACTTCATTAAAATAGTTGAAAAAAAATAATTATTTTTTTTATGGCCCACCAAGAAAAATATCAAAGTAAAAAAATATTATGGAGCCCATTGGGATGGGCTTGCTTCAGACTTGGAAAGTAAAGATAAATCCACGTAATCTACGCGTTTCCGCGGAAACGGAAATTAATGCCACCCTTCTATCACTCTCATCACTCACTCTTTATTTTATTTTATTTTTATTTTTTAATACCCTCACTTTAGAATCCAAAACCTACTAATTAAGAAAATATACAAGTAACTATTACACTAGTTCTTTACTGATACTGCTTCTAAATCAAGGTTGGCTCATACAATAAGTTATTAAATATCTATTTGATGTCACCGTTAGATACTAGTATATTCAATTTTCTAAACTCAAATAATTCTTTATAAATATCAGCTCATCGATATTTTTCACGTGTTGAATTACTTTTTGTAATATTATTTGTTTAATTAAAAAAAAATACATGTAGATTCTTTAAACAAGTCATTCAAACCAAGAAAAATAGTTACTGAGTACAACTCTATATTTTATCCATAGTTTAAGATTATAAGATATAAATTAAATAGTCAGTCTCTTTATTTATCTTAAAAAATATAATTTATTAATATATAGATTTTATTATATCTCTCATTATTAATTTGAAAGTTCACATCTCAATTGTTTTATTTAGTAATTAAGAAAAAGAATTATCAATATTGTTTAAAAATAAAGAAAAACAATAAATAATGTATTTTGAAAAGTAACAGTTAGAAATACGAAACTGTAGTGGAAAATGAAAGAACAGTTATCAACTGTCAACCGTGTTTTGAACGCGTGGGTTGTCATCCGGAAACCAAACAGGTCATTAGTCAAAGAGACGTTGGAAGGTCATTCACTTCTCTTGTTTTACGAGTCTCTATCACATTATCCACTGCCTTCTTTTTCTTGTACCACTAAATCTTTTATTCATTTTTTTTTCTTTTCCTTCAACTTATACCTCAATCTAACTAGTTCTTCTTCACTTTCCATTGTTTGGGCCTGTATTTGGGCCAACCTAAAAATTTAAAGCAAATTCAGAACCCAAAAATTAAATATTAAAATAGCTTCATACATTTAAAACATAGATAGATTTAAAGAAGTGGTATTTTAAAATACAAGGTAAAGCGTAAAAGAAACAAGAAAAGGGAAGTTGGGCAGTTACATGCACGTAGTACTAAGGTAGGCTTTCGTTAATATTTTAAACATGTGGTAGTGAAGTTTATGGCATGAGTTGTCGATGATTCAAACATCACCTCGCTACGGAAACCCAGCAAGCGAACAGAATATGATGCAATAAATAAAAGAATGGGTAAGATTTTCAATCAAAGGGTCAATTGGCATGACTTGTCTCCTGCTGCTACATAGCAACACTTCCCTCTTTTACGTCACAGAAAAGGCCCAAAATCAAAGGAAGGTAGAAACCCCTGAATCCAGAAGGAATCTAAGCCCAATCTTTTGACCGAGACAAACATAGATTCAATACACACACTCCCTCACTCTCCTTCGCTCCACCTTCCCCTTTCCCTTTCAGCCAAACCACCCTTATCCAATTTCATGTTTAGGAAATGAAAAGAAAATCACACGTGTCAAACACAAAGATCTAGAAAGGGTTACTCCCCATACCGTGGGATGAAAAAAACTGCCACGCCCCAAAATCAGAATTGGCTAAACCTAACCCCAACTTAGCTGGACAAACAGTGTGGACACTTTCCTTCAAACACAACCTCACCTTCTCCAACTACATACATACTATATATATATATAACTCACTTTCCCTCCTAAAACCAAACAAAACACAACCACAAAAACAAAAACACAACAACGTTGGTTACTAGTAGTAACTGATATAACTACCGCTTTTGCACACGTTCTTCCATTCACTCAAACAACTCCAGAAAACCAAACTTTCCGTCAGGTATCA


Gene Sequence:
>Vu_30970(+)
ATGTTTTCCACCGACCCACAAGCGACCTCGCCGGACTCGGGAGGTTCCCGTCCGGCGCTGTCGGACGAGGAGGTGTTTCTGGCAGCGAGCCACCCCAAGAAACGCGCTGGGAGGAAGAAGTTCCGGGAGACGCGCCACCCGGTGTTCCGCGGCGTCAGGCGGAGGGACTCCGGTAAGTGGGTGTGCGAGGTGCGCGAGCCCAACAAGAAGACTAGGATTTGGCTGGGGACCTTTCCTACGGCGGAGATGGCGGCGCGTGCACACGACGTGGCTGCGCTGGCGCTTAGGGGAAGGTCGGCCTGTCTCAACTTCGCCGACTCCGCGAATCGGTTACCGGTGCCGGCGACGGCTGATCCCCGGGACATTCAGAAGGCGGCGGCAGAGGCTGCAGAGGCGTTTCGGCCCGGTAACGAATCGGGAAAGGATGATGATGCGGTGGTGGAGACCGTGGCGACAGCGACGGAGAGTGTTGAAGAAAAAGAGATGGAGGATCTGAGGAACATGGTGCTGATGTCGCCAACCCATTGCTTCGAGAGTGATGAATATGGAAGTACGGAAATGGAATTTGAAGACATTGAAGTTTCGTTGTGGAGTTACTCACTCTAA