Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_31734	LG9	2587936	2588352	SRSF protein kinase 2	Map

Annotations

category	relationship type	keyword
Biological Process	involved in	regulation of mRNA processing, phosphorylation, spliceosomal complex assembly, phosphorylation, regulation of mRNA processing, intracellular signal transduction, protein phosphorylation, spliceosomal complex assembly, spliceosomal complex assembly, regulation of mRNA processing, spliceosomal complex assembly, protein phosphorylation, protein phosphorylation
Cellular Component	is active in	cytoplasm, nucleus
Cellular Component	located in	nucleus, nucleus
Molecular Function	enables	protein serine/threonine kinase activity, ATP binding, protein serine/threonine kinase activity, ATP binding, protein serine/threonine kinase activity
Pathway	B 09181 Protein families: metabolism	C 01001 Protein kinases [BR:ko01001]

No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_31734.1

MVLEFLGDSLLRLIKYNRYKGLPLNKVREICKCVLIGLDYLHTDLGIIHSDLKPENILLCSTIDPAKDPLRSGLSPILERPEGNTNGGVSSLVEKRLKRRSRSAVAKISERRGSMGGTEDVAETDRNINGIDVRCYAR*

CDS Sequence:
>Vu_31734.1

ATGGTCCTAGAGTTTCTTGGCGATAGTTTGCTTCGCTTGATCAAATATAACCGTTACAAAGGCCTTCCATTGAATAAAGTTAGAGAGATTTGCAAATGCGTTTTAATTGGTTTGGACTACTTGCATACTGATCTTGGTATAATCCACTCTGACCTAAAACCTGAAAACATTCTTCTATGTTCAACCATTGATCCTGCCAAAGACCCTTTAAGATCTGGACTCTCTCCAATTCTAGAGCGACCTGAGGGAAACACAAATGGTGGAGTATCAAGTCTTGTTGAGAAAAGGTTGAAAAGGAGATCAAGGTCGGCAGTCGCTAAGATATCCGAAAGGAGAGGGTCAATGGGAGGAACAGAAGATGTTGCAGAGACCGATAGAAACATTAATGGGATTGATGTGAGATGCTATGCAAGATAG

Promoter Sequence:
>Vu_31734::LG9:2588352-2590352(-)

ACATTCGGGGATATACAGAACCTATAGGAGGGTGGCTTAGTCACTTTACTGGGTGGAAATGGAAAAGACGGTGACAGATTATGTGGCGGGTTGCTTGGTGTGTCAGCAGCATAAGTACCTCACGTCTTCTCCTCAGGGTCTGTTGCAGCCACTACCTATTCCTAATGCTATGTGGAAAGAAATCAGCATGGATTTCATAGTTAAACTACCGAAGTCGAATGGGTATGATGCATGGATGGTACTAGTAGATCGCCTAAGCAAATATGACCATTTCGTGCCACTGAAACACCCATATTCGGCACGCACCATAGCTGATGTGTTCATAAGGGAAGTGGTCCGATTAAATGGAATACCAGCTTCGGTGGTAAGTGACCGCGACCCTTTGTTTCTGAGTATTTTCTGGAAGGAATTATTCAAGAGACAAGGAACTCAGCTACAAATGAGCACGACTTACCATCCGAAAACAGATGGGCAGACAGAAGTATTAAACAGAGTTCTGGAGGGATATTTACGTTGCTTTTGTTCGGAACAACCGAAGGGGTGGAGTTGGATTTTACCCTGGGCGGAATACTGGTATAACACCAGTTTCCAAGGAGCTGCGAAATGTACTCCTTTCGAGGTGGTTTATGGCCGACAGCTCCCATCATTACACAGGTTTATCCCAGGGGAAACGGCGGTGGAAGCAGTTGCTCAAGAATTACATACACGAGACGAAGCTTTGAAACAATTGAAGTTTCATTTAGTACGGGACAATAGCTCATGGTCAGACAAGCCAATAAGAAAAGGAGGGCAGCAAATATTGAAGAGGGAGATTGGGTATATCTCAAGATTAGGCCACATAGACAAACATACGAGAAAGAACTTATGGCACTAAGCTGGCAACACGATATTATGGGTCGTACCAGGTTGAACAAGAGGTGGGGAAAGTGACTTATAAACTCCAGCTACCAACATCAGCTCGTATAAACCCGGTTTTCCATGCTTCCCAATTGAAGAAGGCTGTGGGAGATAGGACTATAGAGAAAGAGCTGCCTGAAGATCTACAGGGGGAAGGGCCATCTTATTGGCCTACTAATGTTCTTGAACGAAGACAAATCAAAAGAGGAGACGAGGAAGTTCCACAAGTGTTGGTTGAGTGGCAAGAAGGAGGCCGTGATGGAGCAACATGGGAGGATGTCATTACCATACGTGATCAATACCTAGAATTCAACCTTGAGGACAAGGTTGAACATGGGGCGGTGGGTAATGATAGACCTTGGTTAGTTTACAGGAGGAGGGAGAGAACTAGGTGACTTAACTGTCTTAATGGTTAAGTAGCTGTTAGTAAGTGGGCGGGGAAAAGCTGGTATTATAAATACCTCTATTAGAAAAGGGTAGAGGACTTTTGGTGATTGTAAGATACATAATAGGTTCTTGGAACTTTGTTGAGAAAGGTTGTGCTCTCGTGATATTCACTGTACATTGTGATTACTTGTGAATAACAGAATTCTTTCATTCTTTCTGGTGTTCTGTTTGTGTGAGAGTGCATTGTGGTTGAGCTTCCTAATTAGAAATCTAACATTGGGTCCCTATGTTAAGAAAATTGTATGAATAAGGTCTTGTCCGTTAAATTGACAGCAACAGCGTTAAGTCCATGCTAATGTGGCTGTACTTTTTCTCTTCTCTCCTCTGTCCAGCTTTTTCTTTCTCTTGTTCAGCTTTTTCTCTCTCTCGTGCCATACGCCTTCACTTCCACACTCGCTCTTTGCTCCTCTCTCATCCTTTCAACTTCAATCACTCTGTCCTCACTCTTTCCAATTTTATCTAATTTTTAGATCGTAGTTTTCAGTCATTTGTTGCTCTCAAGATCCAGAAAAGTGCCACCGAGTTTGTTCAGGCTGCCCCTTCATGAGATTGATATTCTTTCATCCATTGTTGACCATGACCTATCAAATTCAAAATTTGTGATTCAATTGATTGACAACTTTAAGCACACTGGTCCAAATGGGCAGCATCTTTGC

Gene Sequence:

>Vu_31734(-)