Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_31773 LG9 3781395 3782311 protein BASIC PENTACYSTEINE6
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
C/T 3781822 missense_variant p.Gly20Arg
G/A 3781840 splice_region_variant&intron_variant
C/T 3781841 upstream_gene_variant
A/G 3781853 upstream_gene_variant
G/A 3781876 upstream_gene_variant
C/T 3781931 upstream_gene_variant
C/T 3781979 upstream_gene_variant
C/T 3781984 upstream_gene_variant
C/G 3781985 upstream_gene_variant
C/T 3782002 upstream_gene_variant
A/G 3782037 upstream_gene_variant
G/T 3782046 upstream_gene_variant
C/T 3782055 upstream_gene_variant
C/T 3782059 upstream_gene_variant
A/T 3782061 upstream_gene_variant
C/A 3782064 upstream_gene_variant
G/C,T 3782085 upstream_gene_variant
C/T 3782087 upstream_gene_variant
C/T 3782095 upstream_gene_variant
C/T 3782111 upstream_gene_variant
T/C 3782121 upstream_gene_variant
G/T 3782141 upstream_gene_variant
G/A 3782142 upstream_gene_variant
T/C 3782144 upstream_gene_variant
C/T 3782146 upstream_gene_variant
G/C 3782156 upstream_gene_variant
A/G 3782164 upstream_gene_variant
A/G 3782165 upstream_gene_variant
G/T 3782209 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_31773.1
MLSNIVISIPRIVFFKLNVGGENILRFRAQAETLWRGSGGATITNRWSSKVAACTRTLVGPLRGARREGSFRHLNGRSRGWCGSRSWLSFRLRKGQDLGLNQVAYDESTMPSSVCSCTGVLKQCYENSIHL*


CDS Sequence:
>Vu_31773.1
ATGTTGTCCAATATTGTCATCTCTATCCCTAGAATTGTTTTCTTTAAACTCAACGTTGGGGGAGAGAATATTCTGCGTTTTCGAGCACAGGCAGAGACCTTGTGGAGGGGTAGCGGAGGCGCGACGATAACAAATCGATGGAGCAGTAAGGTCGCGGCGTGCACGAGGACGTTGGTCGGTCCGCTTCGTGGTGCAAGGAGGGAGGGTTCGTTTCGGCATCTCAATGGTCGTTCTCGTGGGTGGTGCGGATCACGTTCTTGGTTGAGTTTCAGATTAAGGAAAGGTCAGGACTTGGGATTGAACCAAGTGGCTTATGATGAGTCAACCATGCCATCGTCTGTATGTTCTTGTACCGGTGTCTTGAAGCAGTGTTACGAGAATTCCATTCATCTGTAA


Promoter Sequence:
>Vu_31773::LG9:3782311-3784311(-)
TGCTCCAAAACTGTAAACCTACTCAAATTCTTCCACTTTATTCTTTCTTTGTTATTCCACCTAAAATTGATACTTACATCTCTTACTATCCATATATATATATATCGAACATAAAATTACTTATTAATAAGATAAATGATAATTAATAAATTTTAGAATAAATTTCAAATTACGTTAATATCATCTTAAATATTAAATTTTAAGTTTAACTTAATTTTACGAAATTAAATTATAAAACAAGATTTAATTTACTATTGTTCCATAGGATTCTACGGTCTCTACATCAATGGATAGTCGGTCAAAAAAATAGTGGAATCAAATGGTTGTAGTCTTAAACAACTTTAAGGATAGTTCCTAATCAAATTTACCGATAAGTTCTGTTGATTAAGATAATGGATCGTGATTACGATCTTGCTAATCATAAGTCCAACTCAACACATAAATACAGGTCAAAGGTAAGAGGGCAGGTGATTACATTTATTATAAAATTAAGATTTTAGTGTAACTTCCGATTGGTTAGATTACTTACTTAAGCGTCGAAATGCTCTTGATAGATATGTACCCGTACAACATGAAAAAGTTAGAACATCAAAAAAAGTAAAAAAAAAATAACTATAGAAAATATTTAAAATAATCTAAGATGAACAAGAAAAAGTGTGAAGAATATTTTGTGATAACCATCGACCCTATGCCCAAAACAACTATAAATTCACTTATTTCTTATCAAGAATAAACAAGTATAAATACCATTGTCTCGCGAACATATGGTATCAATATCATCTTACCTTTATAGCTCACCTTATTGGAAGGTTTGATATTAAAACCTGGAGACATATTGAAAAGGGATGTGAAAAAGTAAAGTGAATAAATGAAAAGGAAAATAAAGAAAGGGTAAAAATTTGATTCCCCTTAAAAGACAAATTTTGCATCATCCAATAGATATATTAGATGACCCTTTATTTGGGAAGTATCCTATGGCACCATCTACACACCCACTATATTTAATGGAAGAGTTAATCTCTCAAAACATTTCATATTCTAGCTGTCTGCTACATGCAAGAAACATGTAAGTTTAGTGATGAGGTAGCTCCTAGATGCCTCAAAATTGTCTGGTTTATGCAAAGTGATTTTATGGTTGAAGGAAATAATATCATTGATCTCACATAACACTGTAATCTTCTCACAGATTTCAAGAAAATCTCTTATTATTTTTTATTACACTTTCAACCTTTCCTAGGCATATATAGGGTCTTTCTTTTTCTCTTGTAAATTATTCTGTTAAAGTTTTGCATACAACACTTCATCATGAAAGGAATTTTAGTGCCTGTTCGTATCGTGTCTTGTTGATCTTCAATCGTAATATTTTGAAAACAACCGGACAATTTATTGCACGTTCATTTCAAAATTATTATATTGAAAGAACACAAAATTTAAGACTCAACATTACACGAAATTGCATAATTGTTGACTAAATTTTACTGAAAAAACTTTTTGGTAAAATAAATTTTATCATTAGATTTTACAATTTTTATTATTGATAAATATTTTTAATCAAAATACTCTCAAAATATATTATGGAAATAAAAAATTACAATTTATTTAAAATATCCCATAAACCTATCTAATTCTGTCATTTGAACTTGTAAACTACTTTAACTGATTTTTTTTTCAAACACTTATAATTTAATAAATTAACTTAACTTCAACTATCAACCCTGTATTAGCATTTCCTAAACAAGCTTTCTTAAAAGTAGTAATTTCCAACTTTTTTATATTTATTCCTTTTTCCTCTTAAATATTTATTAAACTTGCTTTCTACTTTATTTTACACAAGCATTCTCTTCATTCACAAATTCGACATGACTTTTTAATTTTTACTTTTTTACATGAGGTAAACATTTCTTATTTTGATTGAAATATATATATTCAAAATTATAGAATTTATTTTAAGTATATTATACATCTAATCAATCCCACTTTTTTTTTTACTGTGCAAGCTA


Gene Sequence:
>Vu_31773(-)
ATGTTGTCCAATATTGTCATCTCTATCCCTAGAATTGTTTTCTTTAAGTAAGTTCTCAAATTTAAATAATATATAAGAATAAATATTTTATGTTTAATGTCTCTGTAGATCCTTATTTTTGTTCGGAATCTCATTTAAGTTTCTTTTTTTTTTGTCGTCTCAATTGGATCCTCATTTTTGTAAAATTGGAACAATTAAAGGTCTGCCGTCAAATTGGACAAACGGCCGTTTAATTGTGCGTTACGTGGCATGGACAGTGTTTTCACTAATCACATGTGGAATTAAAAAAGAGTTTTGTATTAAAAATTTGGATTGAATCAGATTTAGGGAAGGGCAAAGTGGAGAAAATGTAAAAAAAAATTAATTGCAGCCCTAGGGTCGCGTAAGGGAAAACTCTTTCCCATCTCTTCTCTGTTCCAGTTAAAAGCAAAACTCCAGAAGCTTGAAGCTTCTTCCCTTTCTCCTTTGACGCAAACAGACTCAACGTTGGGGGAGAGAATATTCTGCGTTTTCGAGCACAGGCAGAGACCTTGTGGAGGGGTAGCGGAGGCGCGACGATAACAAATCGATGGAGCAGTAAGGTCGCGGCGTGCACGAGGACGTTGGTCGGTCCGCTTCGTGGTGCAAGGAGGGAGGGTTCGTTTCGGCATCTCAATGGTCGTTCTCGTGGGTGGTGCGGATCACGTTCTTGGTTGAGTTTCAGATTAAGGTTTTTTTTTTAAATTGAAATTAGGGATTTGATTCATCTGTTTTCTCTGCAGATTGATTCATTTGGAAATTAGGGATTTGATTCATCTAGGAAAGGTCAGGACTTGGGATTGAACCAAGTGGCTTATGATGAGTCAACCATGCCATCGTCTGTATGTTCTTGTACCGGTGTCTTGAAGCAGTGTTACGAGAATTCCATTCATCTGTAA