Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_32801 LG9 26491249 26492316 PREDICTED: mitogen-activated protein kinase kinase kinase A-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of abscisic acid-activated signaling pathway, protein autophosphorylation, protein autophosphorylation, response to osmotic stress, abscisic acid-activated signaling pathway, response to abscisic acid, positive regulation of leaf senescence, response to abscisic acid, positive regulation of abscisic acid-activated signaling pathway, protein autophosphorylation, positive regulation of abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, positive regulation of leaf senescence, positive regulation of abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, signal transduction, response to osmotic stress, positive regulation of abscisic acid-activated signaling pathway, positive regulation of abscisic acid-activated signaling pathway, response to abscisic acid, positive regulation of abscisic acid-activated signaling pathway, response to abscisic acid, response to abscisic acid, negative regulation of stomatal opening, abscisic acid-activated signaling pathway, positive regulation of abscisic acid-activated signaling pathway, positive regulation of abscisic acid-activated signaling pathway, positive regulation of abscisic acid-activated signaling pathway, regulation of stomatal complex development, regulation of stomatal complex development, response to abscisic acid, regulation of stomatal complex development
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, MAP kinase kinase kinase activity, protein binding, protein kinase activity, protein serine/threonine kinase activity, protein binding, protein kinase activity, MAP kinase kinase kinase activity, protein binding, protein kinase binding, protein kinase activity, MAP kinase kinase kinase activity, protein binding, protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
G/T 26491389 missense_variant p.Gln47His
G/A 26491529 missense_variant p.Arg94His
A/G 26491552 missense_variant p.Thr102Ala
G/C 26491622 missense_variant p.Cys125Ser
C/T 26491626 synonymous_variant p.Asp126Asp
G/C 26491663 missense_variant p.Val139Leu
T/C 26491664 missense_variant p.Val139Ala
A/G 26491746 synonymous_variant p.Pro166Pro
G/A 26491755 synonymous_variant p.Ala169Ala
G/T 26491757 missense_variant p.Arg170Leu
C/A 26491823 missense_variant p.Thr192Lys
G/C 26491831 missense_variant p.Ala195Pro
C/T 26491842 synonymous_variant p.Pro198Pro
G/A 26491849 missense_variant p.Glu201Lys
T/A 26492086 missense_variant p.Phe280Ile
G/A 26492122 missense_variant p.Asp292Asn
C/A 26492235 synonymous_variant p.Ile329Ile
A/C 26492236 missense_variant p.Thr330Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_32801.1
MGWWQRGHTIGRGSSATVSTATCCAGGAVFAVKSAELSQSESLKREQNILSSVSSPYVVAYKGCDVTMENNKLLFNLFMEHMPFGTVAQATRRRGGRLEEATMARYTRQIVQGLEYLHSKELVHCDIKGANILIGEDGVKIGDLGCAKSVVDSAVVIGGTPMFMAPEVARGEEQGCASDVWSLGCTVVEMATGDAPWPSVEDPFSVLYHIAYSGEVPEIPCFLSEEAKDFLEKCLRRNPQERWKAGELLKHPFIGKSCSNNKEILESNSSSPTSVLEPCFWSSVEESESVGDLINNPRKFELLAAGRVRMLALSSGLPCWAQHDDENWITARGNGGKGFGNGGSGTASASHELSH*


CDS Sequence:
>Vu_32801.1
ATGGGGTGGTGGCAAAGAGGCCACACCATTGGCCGGGGCTCATCAGCCACCGTCTCCACCGCCACCTGCTGCGCCGGTGGCGCTGTCTTTGCCGTGAAGTCCGCGGAGCTGTCTCAATCGGAGTCTTTGAAAAGGGAGCAGAACATTTTGTCCTCTGTAAGTAGTCCTTATGTGGTTGCGTACAAAGGGTGTGACGTTACGATGGAAAACAACAAGCTCTTGTTCAACCTCTTCATGGAGCACATGCCCTTTGGCACGGTTGCTCAGGCGACTCGCCGGCGCGGTGGCCGGCTCGAGGAAGCGACTATGGCACGCTACACCAGGCAAATTGTGCAGGGGCTGGAGTACTTGCATTCAAAAGAGTTGGTGCATTGCGACATCAAGGGTGCTAATATCTTAATCGGTGAAGATGGGGTGAAGATTGGAGACTTGGGGTGTGCTAAGAGTGTGGTGGATTCCGCGGTGGTGATCGGCGGCACCCCGATGTTCATGGCCCCAGAGGTGGCGCGTGGAGAGGAGCAAGGGTGTGCCAGTGACGTTTGGTCACTTGGGTGTACTGTGGTTGAAATGGCCACAGGTGATGCACCGTGGCCCAGTGTGGAAGACCCTTTTTCGGTGCTTTATCATATTGCATATTCTGGTGAAGTGCCTGAGATTCCTTGTTTTCTATCTGAGGAAGCAAAGGATTTTTTGGAGAAGTGCTTGAGGAGGAATCCACAAGAGAGGTGGAAGGCTGGTGAACTTTTGAAGCATCCATTTATTGGAAAATCATGTTCCAACAATAAGGAAATTTTGGAATCTAATTCAAGTTCCCCAACTAGTGTTCTTGAGCCATGCTTTTGGAGCTCTGTGGAAGAGTCAGAAAGTGTTGGCGATTTGATTAACAACCCAAGAAAGTTTGAACTTTTGGCTGCTGGGAGGGTCAGAATGTTGGCTCTGTCTTCTGGGCTACCCTGTTGGGCACAACATGATGATGAAAATTGGATCACGGCCAGAGGGAATGGAGGGAAAGGTTTTGGCAATGGTGGGTCAGGGACAGCTTCTGCTAGTCATGAGTTGTCTCACTAG


Promoter Sequence:
>Vu_32801::LG9:26489249-26491249(+)
TACTATTAAATGATAGATAGACATGTGGGTAAATTTTTGTGTGGTCAAATATTAGTGGTTAATGTATTTATTTATTTATTTTTGTTATGTATGACTCTAATTCCCTCTATTTTTCTTCTATCATCTTTTAAGCAAGCCACAATTAGTATGTGTTTTAACTTTTCTTTATGATAATTAAAAAATAATAAAATAAATACTATTGTTATCATTATAATTATAAAATTAAATATATATTTTTTCTAATTTTATTGTAAATAGATTTTATGTATTTTATATGTAATTATTTAATTAAAAAATAGTTAAATTTAAAGAAATGGTTCCTTTGAAGATATAATTGATAAAATAATTATTTTAATTTAAAATAACTTATATTTAAAGGATAAAATTAGAAAATAAATGTGAATACCAAAAAATGAATCATCTTTATGTGTTTGTGTGCGCGTGTGTATATATATATATATATATATATATATATATATATATATATATATATATATATTATTTGAACTATTTTAATGTATATGTATAGTTTAGTAAAATAATTATTAGTGAATACACCCCTAGCTATATTCTAATAATCTAATTTATTGAATTATAAGTGTTTGAAAAAACTATTTTAAACTAGCTTTAACGTAAAATTACATAAAAATATAATTATATAAATAGAATTTTTAATTTTTAGATAAATATATATATTATTACATGATTATAAAGGTATATATTTTTTAAATTAAATCTTTTATAGCATAAATCCCAAAGAAAAGAAAAGAAAGCTTTTGTCTTTACGAAATCAAAATAAATAATAACTGATAAAAAAGTATTAAAATATCAAAAATAGTAATAAAAGATTTAAACAAAACTTAAAGTTAATTGAAATAACTTATAACTTAGAAAGTAAAATTTTATCAAATGAACTAGTTTAAAATATTTTATCATATAGTTTTCTTGTATTGGTTAAACTAAATTTTTGACTAATACAATAAATTACTACTAGCATTAACAAAAAAAAAGAACAGAGTTTTTCAATCACTTATTACTTGGGGAATACAAATTCTACCAGTAGTTTCAACCTTTGAACGAGTTTCATATGATCCTTCAATTTTTGAAAGCTGAAAGGAAGATCTACCAACGTCACAAGTTACAAGAAACAATGATGATAAATAACTTTACACATTTGAAACATTGAAGGCATTTAGGACGAGCTTATTATTAAATAATTTAACTTATTTTCATTTAACAAAATCTACGTAAAATTGACTGAATGAAAAAAAATATTATTTAACTAGGAAGAGGTGGAAAAGGTCTCCAGAAGATATTTATTTAATGGGAAAAGAATGGAATTTTCTCTTTAATATTTGACTGCTATCTAAACCACCTGCACCAGTTGACTCGTACTCTTCTTCACCCTATACGACTTGTAATTTGTCAAGTCCATAGATTCACACAATAGCACAGTCACAAAATTCAACCCTCAAATAAAACTAACTTGTAAAAAAGATACCAAACTTTCAACCCTTATGGGTGGTTCAACCCTTCAAAGTTCATACCCACCCAACTCCCCAAATGCTTCCCCACATTAATTTTTTTCAAACTTCATCTAACTATGATACAAAACAAGGAATCTGCCCTTCATTGCCACCCCATCTACCTCATCCAAACTCTTCAACTCTTAATGTGCACCAATCTAAACCCTTTCCCTAATTACACACACTTAACATCCAATCATACTTAAACCCCACTTCCACGTGTCCTTTGCCGACTAATAACCTTTGCCATCAAAATTAGGCCACGTTGACCACTCTACACACAGAACAAAGGATAGAGAGTGTGTGCCAACCAAATTAAGTACCCAACCAATAAAAACAACCTTTTTATAAAAACTTATACTCAAAAGTGTCTTCTTTCAATTCCACACACATATATATAAATAAGGCCACAATGACCAAACTCAAACTCCTCACAAAACCCTTCACTTTTTTTTCTTTCCAAATAAACAACCA


Gene Sequence:
>Vu_32801(+)
ATGGGGTGGTGGCAAAGAGGCCACACCATTGGCCGGGGCTCATCAGCCACCGTCTCCACCGCCACCTGCTGCGCCGGTGGCGCTGTCTTTGCCGTGAAGTCCGCGGAGCTGTCTCAATCGGAGTCTTTGAAAAGGGAGCAGAACATTTTGTCCTCTGTAAGTAGTCCTTATGTGGTTGCGTACAAAGGGTGTGACGTTACGATGGAAAACAACAAGCTCTTGTTCAACCTCTTCATGGAGCACATGCCCTTTGGCACGGTTGCTCAGGCGACTCGCCGGCGCGGTGGCCGGCTCGAGGAAGCGACTATGGCACGCTACACCAGGCAAATTGTGCAGGGGCTGGAGTACTTGCATTCAAAAGAGTTGGTGCATTGCGACATCAAGGGTGCTAATATCTTAATCGGTGAAGATGGGGTGAAGATTGGAGACTTGGGGTGTGCTAAGAGTGTGGTGGATTCCGCGGTGGTGATCGGCGGCACCCCGATGTTCATGGCCCCAGAGGTGGCGCGTGGAGAGGAGCAAGGGTGTGCCAGTGACGTTTGGTCACTTGGGTGTACTGTGGTTGAAATGGCCACAGGTGATGCACCGTGGCCCAGTGTGGAAGACCCTTTTTCGGTGCTTTATCATATTGCATATTCTGGTGAAGTGCCTGAGATTCCTTGTTTTCTATCTGAGGAAGCAAAGGATTTTTTGGAGAAGTGCTTGAGGAGGAATCCACAAGAGAGGTGGAAGGCTGGTGAACTTTTGAAGCATCCATTTATTGGAAAATCATGTTCCAACAATAAGGAAATTTTGGAATCTAATTCAAGTTCCCCAACTAGTGTTCTTGAGCCATGCTTTTGGAGCTCTGTGGAAGAGTCAGAAAGTGTTGGCGATTTGATTAACAACCCAAGAAAGTTTGAACTTTTGGCTGCTGGGAGGGTCAGAATGTTGGCTCTGTCTTCTGGGCTACCCTGTTGGGCACAACATGATGATGAAAATTGGATCACGGCCAGAGGGAATGGAGGGAAAGGTTTTGGCAATGGTGGGTCAGGGACAGCTTCTGCTAGTCATGAGTTGTCTCACTAG