Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_33371	LG9	40402639	40405692	probable serine/threonine-protein kinase PBL15	Map

Annotations

category	relationship type	keyword
Biological Process	involved in	regulation of lignin biosynthetic process, protein phosphorylation, phosphorylation, regulation of lignin biosynthetic process, protein phosphorylation, phosphorylation, regulation of lignin biosynthetic process, protein phosphorylation, regulation of lignin biosynthetic process
Cellular Component	located in	plasma membrane
Molecular Function	enables	protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, kinase activity

No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_33371.1

MKEPSKAWRPFTANCCSTEDQTVFKNFSRCKPSRSDLSKNIAPLPSFRRLSFSDLSRSSSVRINEDLAQSFGSDLFDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYVDDNLRLGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSIPWGTRLKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSEFTAKLSDFGLAKMGPEGSNTHVSTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKTRPKTEQNLVDWSKPYLSSSRRLRYIVDPRLAGQYSVKGAKEIARLALQCISLNPKDRPRMPMIVETLEGLQQYKDMAVTSGHWPVSQKSTRNKVSNNKTNVNTRAGANHKQPSPVLSKKT*

CDS Sequence:
>Vu_33371.1

Promoter Sequence:
>Vu_33371::LG9:40405692-40407692(-)

ATGAAGTTGGTGATGAGGGAAGAGGGGACGACAACCAGTACAGAGGAAAAAAAAATGTAAGCTTGATATAAATTGCGGCAAGGAGACAAGGAGGAGGAAGGGAGGAGAAAGGAGTGTAGGTTTAGGATTCTGAAATGCGTAAGGCAGAGGAGGGTTGATGCTTCTTTTATCATTGAATGGGTCAGCTTTTTTGAAAGAAAAAGATTTTTTCTGACAAGGGTACAATTGTAAATAAAAAAAGAAGGAAAGTGCAAGGTAAAGTGAGTGAGATGTAGGGAGAACCTCTCTGATAAACTATTACCAACTTGGCATAATAAACTTTATCTTTAATATTTTGATTTATCCAGATAAAATTGAGTGTTATGACATTTAAAAAGTAAGATTCCTTTTTCTTCATGTGTTTTTTCTTTTCTTGTTTTTTAAAATTTTTAAAATTTTATTTATTTATTTGTGAATTTGAATTTGAATTTGATTTTTTGAAAATTTAATTTTGATAATAATAAAATGGACAAAAAATTAAGTATGTAATTTTTATTTTGACCTTTAAATCTGCAATTGTTCAAATTTAATCTTTAAAATATCATGATGAATGTAATTTTAGTTCTTATTGACACGTTAATGCATTGTGAGTGACAACATAACCTATTCATCGTTCTAACTTATAATTTGTCACTAAGTCTCATGTCATCAATTAGATGTAAACAAATACATTTTTTTTAGAAAATGGACTATAAACTATTAAAAGAATTAAAATTCCAATAATTTTCAAATGTGGGTTTGTTTAGAGAGTAAAATAACACCATCATAAAACTATAAGATTAAAAAGTTGATTTAAGTTTTTTTCAAGGGTATAAACACAAAGCAACATTGAAAGTGATTCAAATGATATGACCAAGTTTTCAAAGTTTTACAAAATTGACATCGGACTGATGAATGATTTAACTTTTTATCTGGTAGTTGAAATTGGTGGTGATGAGTACGTAGCATATATACTTATGTGTATACCTCATTCACTACCTAGTTTTCTGTTTACTATAATATTGACTTTTTGGACCAGCTTGTCGAATACCTTATCCAGCACTTCAACATGCAACTGCTCCTCTTCACATTAATTCTTGTATTTCTGAATGAAGACACAAATTGATGTCATTCCCTTCGTCACACTGTTCTCATTTATACGTTACTTAGGTTACCAAATCATTATATACTCTATTCAATTACATTCATTAACTTTTCTTAATCACACCTGTTAACATAAATTATGCATCAAACTTAATATGTTCTCCTCATGGAACAGATAAGCTTCTATTATCTGAATTATTATACACCATAATTAAATGAATCCTTATGCCACCTAGCTATGATTATAGTAACTAGTGACTATTGTAATTAATTACCATATATCCAATATATTATATATGTTTTAGATTTTATCGACAATTATAGTTAAAATTAATCCCGTACATTTGAGGTTTTGTCTGTTTAAAAATTTTAAAACTTCCTCACGATCTTGTTTTAAAAAAACATTTCAAAGAGTATAAAAAAGAAAAAAGTATTTAAATGGTCTTACCAAAATATATATATATATATATATATATATATATGTCTTACCAAAATATATATATATATATATATATATATATATATATATATACTTTTTACATTACTCGAAACAATTAAGGAAAGGAAAAGGAAGGTGTGTGGCGTGGACCTATATAGTAATACTACGTACAAAAAGACATTGGTGTATTGTGCATGAAGACACGACATAGATGACAAATTAGAGAACAAAACAACTTACACATAAGTAAACAAACATATGGAAACAAATAATAATGTCTGCAAAAATTACTAGAGTGGTTAGAGCAGTTGAAGAAAGAATATATTTTCCTAAGTCTCCATCAAATGTAGGAAAACTTTACCATATATTGTACAATATTCTTGGTACTTATATTTTGCAGAACATCAGAATTCTTTCTCACAAGACCTTAACTTAGGAA

Gene Sequence:

>Vu_33371(-)

ATGAAGGAACCATCAAAGGCATGGAGACCCTTCACTGCAAATTGCTGCTCCACAGAGGACCAAACCGTGTTCAAGAACTTCAGCAGGTGCAAGCCTTCACGTTCTGACTTGTCAAAGAACATTGCTCCTTTGCCATCGTTCAGGAGGCTCTCCTTCTCTGATCTCAGTCGTTCCTCGTCTGTGCGAATCAATGAGGATCTTGCACAGTCTTTTGGGTCGGATTTGTTTGATTTTCAGCTGAGTGAGCTGCGTGCCATAACTCAGAATTTCAGCAGCAACTTCTTGCTGGGAGAAGGAGGGTTTGGAACTGTGCATAAGGGCTACGTAGATGATAATCTCAGGCTTGGTTTGAAGGCACAACCTGTTGCTGTCAAGCTTCTTGACATTGAAGGCTTGCAAGGACACCGTGAATGGCTGGTGAGTATCACATTTATTCTTCATTAACTATTATATTATGTTTTTACAGGAATTCTTTTCCCTCTTAAACTTAATTCATTACTATCCTTAACCTATTCTAAAAATGAATTAATAAAGTTCATTACTAAATCATATTTAACCCACCACTATTATATAATTATCTTAAACACCATTCTTCAATTACAAGTTTATTTTTTAGTGGTGTTTCATCTTTTCTTTCACCAGATTCAATTTGAATATTAACTCGCTTGAGGAAAAAAGAAACCTTTAATATATTCATGTAATTAAATTTACTAGTCATTATCAGGGTCGTTTAATTTTGGTGGTGTAGTTGTTGGAATCAGAATCTTGGCTATTTATTTTTAGGAATGAGTGTGATGCAACTAGTGGGAGTTGACTAAACCCATCATCAACTCATTTGATTGGGCATCCAAAGAGAAAAGTCAGGGAATTTTATACTAGCTTACAAGACTTTAGCATTGTCCTGCACTATTATTATATCATTTTTGTGTTCATATTTTATTATTTTGATTCTTGAAGGATGGATGCAAGTCAATCGCTTATAGTACAAGAAAAGTTAAATAAATTAGTATATATACTGTAATGTATAATAGTCTGCAATGACCTTTATTTATTATATCTGAGAGAAACTAGAGTAAAGAAACAAGGATGATCCTATTAGATGTCATAAATGCATGGGACAATTTTATTATGTTCTTTGTTTTTATTTTTAATTTATCAAATTTCCATCAATAGTGAAAAGAAATGAACTGTTTTGTACTTATTTTTATATTGAAATTTGGGGAATGAACCACGTATAAATGAATAATTGCATTGGATTGCAGGCAGAAGTGATTTTTCTTGGGCAGCTAAGACACCCCAATTTGGTTAAGTTGATTGGGTATTGTTGTGAAGATGAAGAACGATTACTTGTCTATGAATTCATGCCACGAGGAAGTTTGGAGAATCACCTCTTCAGAAGTATGCATCAAAATCCTTGTACATTTTTAACTTGTTTGATTTTCACTTGTTACTATTTTCTGTGTTCTAAAACAGTTTACTTGGCAAACAATTTATCATCCAAATTCTGTTAAATTATGAAAATTGTTTCCAATGCAAGTATTTAAAAAACAAAACTACAGAAACAACTGGGAGATGTTTTTTAATCTCTTCAAGTCCTCTCTGTTCTTATGCCGAAGAGACAAATTCTTAGAAAACAGAAATGTGTTCATTTCATATGACACAATACTTGCAATAGTGTTGAGGTAACAAAGAAATTTGAGAAAGTAGAAATTTGTTTCTGAAAACATTAAACAAACAATGAGTTACTCAGTTACTCAGTGCATGTAATTGCAGGGCTAACATCAATTCCATGGGGGACAAGATTAAAAATTGCAATAGGAGCTGCTAAAGGCCTTTCCTTCTTGCATGGAGCTGAGAAGCCAGTCATTTATAGAGACTTCAAGACTTCCAATGTTTTGCTTGATTCAGTACGTGATCAACTACCGATCATTCTCTTTGTTATTGATTAAAACTGTAAAATAACACAACAAACTAAATCCAATGAGTTTTTATGCATCATCTGCTTCTGTTTAAAATAGGAGTTCACAGCAAAATTGTCAGATTTTGGACTTGCTAAAATGGGGCCAGAGGGATCCAACACACATGTTTCAACCAGAGTAATGGGCACTTATGGATATGCAGCACCAGAATACATCTCAACAGGTAGGACTAATAAATCTAATCTGTACCTATTTTCTGGCATGCTTATTACTTCCATAAGGAGGAAAAAAAAGGAATTCAACTAATAACTGCTTTCAATTGGGGATAAATTATTATATGATTTACAATCATGACCAATCTCCACATGGCATGTTGATAATTCTTTTTGGAAAATTGAAAATGTTTGGCACTTAAAAATCTGTGGGATAAATCAGTCCTATTACATGTTCATTATTTTTAAGAAAATTAGTTTTAAGATGAGGTTTGCATACACTTTTATATTGTTTACCTCTAATCGATGTAGAATCTCCAACAATTCTTTACATAGTTTGACATTTACTTTTTGTTGATGAGAACTAAGTTTCATGTGGAGATTGGTCAAACTATGTGGAACCAACCATGTAATAGTTTATTATCAAATTTGGTATGTTTTGCAGATTTTAATGTAACATATGATTATTTACAGGGCATTTAACAACCAAAAGTGATGTCTACAGCTTTGGGGTAGTCCTGCTAGAACTGCTGACAGGAAGAAGAGCAACGGACAAAACAAGACCAAAGACTGAGCAAAACCTTGTGGATTGGTCAAAACCTTACTTGAGTAGCAGTAGGAGGTTGAGGTACATTGTCGATCCAAGGCTTGCAGGCCAATATTCTGTGAAGGGTGCAAAGGAAATTGCCCGTTTGGCATTGCAATGCATAAGTTTGAATCCTAAAGACAGACCAAGAATGCCAATGATTGTTGAAACTCTTGAAGGCTTACAACAGTACAAGGACATGGCTGTTACCAGCGGACACTGGCCAGTGTCACAAAAATCTACTAGGAATAAAGTCTCCAACAATAAGACGAATGTCAACACTAGAGCCGGTGCAAACCACAAGCAACCATCACCAGTTCTGAGCAAAAAAACTTGA