Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34192 LG10 9426988 9428202 PREDICTED: transcription factor bHLH84-like
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
A/G 9427033 missense_variant p.Ser16Gly
G/T 9427111 stop_gained p.Glu42*
T/C 9427177 missense_variant p.Ser64Pro
A/C 9427237 missense_variant p.Asn84His
A/G 9427328 missense_variant p.His114Arg
A/G 9427440 upstream_gene_variant
C/T 9427455 upstream_gene_variant
C/A 9427504 upstream_gene_variant
C/G 9427623 missense_variant p.Pro174Arg
C/G 9427780 upstream_gene_variant
T/A 9427800 upstream_gene_variant
A/G 9428020 upstream_gene_variant
T/C 9428053 downstream_gene_variant
G/A 9428073 downstream_gene_variant
A/G 9428077 downstream_gene_variant
G/A 9428111 stop_gained p.Trp268*
G/A 9428138 missense_variant p.Gly277Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34192.1
MEPIEEISQEWMSCLSEVYTEEEADFMNQLLGNCSIPEQLYESLNMETKAPNADSILFLQGSGSCDHATKYIFPTTNAGNCSNNLGHVSIGFSFQELGLDSGRENLADMDLQDHNARQVLVSEPEKDNTRSMEKSEKRFRSSFEGPENKRNVKSKKNPKPASLRNTEEEAIPEPQSQTLNSCCSDDDSKDSRALKLSGKSRSNRDPATDPQSAYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLELNINITKQEKKCIS*


CDS Sequence:
>Vu_34192.1
ATGGAGCCTATTGAGGAGATCTCTCAAGAATGGATGAGTTGTCTTAGTGAAGTGTACACAGAGGAGGAAGCTGACTTCATGAACCAGCTGCTTGGTAACTGCTCAATCCCAGAACAGTTATACGAAAGTTTGAACATGGAAACAAAAGCTCCAAATGCAGATTCTATCTTGTTTTTACAAGGGAGTGGGTCCTGTGATCATGCTACCAAATATATCTTTCCCACAACAAATGCTGGCAACTGCTCCAACAATTTGGGCCACGTGTCCATTGGTTTTTCCTTCCAAGAGTTGGGTCTTGACTCAGGGAGAGAGAATCTTGCCGACATGGATTTGCAGGATCACAATGCACGCCAAGTATTAGTTTCCGAACCAGAAAAGGATAATACCAGAAGCATGGAGAAATCAGAAAAAAGGTTTAGGAGCTCATTTGAGGGCCCAGAGAACAAGAGGAATGTGAAATCTAAGAAGAATCCAAAACCAGCTTCTTTAAGGAACACTGAAGAGGAAGCAATTCCTGAGCCTCAGAGTCAGACCTTAAACAGTTGTTGTTCAGATGATGACTCCAAAGATTCTAGAGCACTGAAGTTAAGTGGAAAATCAAGATCTAATAGAGACCCTGCAACTGATCCACAGAGCGCGTATGCAAGAAAGAGAAGAGAAAGAATAAACGAAAGACTGAGAATTCTACAGAACCTAGTCCCAAATGGAACTAAGGTGGATATCAGCACAATGCTTGAGGAAGCTGTGCAATATGTGAAGTTTTTACAGCTTCAAATTAAGCTTCTGAGCTCTGATGATCTGTGGATGTACGCTCCCATTGCTTACAATGGAATGAACATTGGCCTGGAACTTAACATCAACATCACAAAACAAGAAAAAAAATGCATATCATAG


Promoter Sequence:
>Vu_34192::LG10:9424988-9426988(+)
AATGAATGATCAGTGTCTATCTTTCCCTACCGTTTTGGATTATGGCATTAGTGATGATAATGTGGGGATGGTTTTATTGTTTGAAGAATTTTAAGAATTTCTATTGCATTTAGTCAAGTTAATTATCACACTCAAGTTGTTGAATTGAGAGTATTTTTGTTTTATATAATTGTTTCTCTGGCCATTTATCATTCTGCAATTTTCTATATCTACTTGTTTAGTAGTTCCATGTGTTTGCATTTATTTTGAACAGGATGGTAAAGATATCGTCACCATTGTAATTTGTAATAGCGTTTTCATTGAAAAATTATTTTTATTTAAGGGAATAACTGAAATTTATAATGTAGAGAAGTGTTTCGTGATTAATATTAAAATTCGTGGTCAGTATTTTAGTGGCATATGATTGACTTGATACGGTGCCTCGTCGAAGAAGGGCCAGTGATAAAAGATGTATCTGGACCTGTGCATTATGCCATGCATCTATATTTAGACAGTAATTCTATTTGCTGATGCTCTTCTATATAAGTGCTTATGGCCACGAGTTCAATGCATCATCATTTGAGGTTTAAAAACATGACAAATATTGTGGTTTTCACGCGGCAATTATCGTAACTGCAAAAAGCTTGGATTCTAACATTGAATTATTCTCTCAATTGTAATGCACGCTTAATTTTAGAAGAAATATAAACCAATATTAGAAGAAAAAGTGTTTGAAAAAAGGTTATTAGCATAATTTAGCAGGACTTGCCTAGCTTACCATTTCCTAAATAAAAGTGGAGTGAAACAATGTTAACTCAAACTGATTGATACTATTCTTTGATATACTTTGAGATGATTGATTCCATATGTTAATTACACAGAATTGTTCCAAACATTTTGAATAGAATTTTTAAGTCCATTTTTACCGTATAATCCTTACACAAACAGTTTTACACTATATATCTGTTGAAAGCGTATTTTCTCATGAATGTTTGAGGAACCACGTTTGGAGGAAGCGTATTTTGACAACTTAACATGCAGAGTATTGCATTTACAATTTCCTTAGATCAGCTAACAAAAATTCTTATAGCGAAATTATCTGACATGAACCGCAATCATTCACAGACTGATCACCCGAGATAAATGTACCACCAGAGCAAATAGGATGCATGCGTAAACTGTTATCAGCAACCATGGATCGATCGACATTAAGAATATATTGTGGTCCAGACCCCCTCATATACATTGTAGAGAATACAACCCGTAGACACCACCAACTTTGTTCAGTTTTTATTTCTTTATTAAGGGATAAAAATGAACTATGAAGAGAAATGCATACATAAATTTGTTGTAGGAATAATACATTTCCTTCTCTAAAAGTGAGGGGCAGAAGGAAGAGTCTGGTATCACATCTGTCCACGTAATGTTATATAGTGTCAACTCAAATCTACTATGGAACTTGAGTTGAAGTCCGTGGAAAATGTGATGGGTTTTTTACAACTGTAGAGGGGACAAAAATCCAGTTACAGATAATGCTGTCTGGTTAAATAACAGTTTAGAACTCAGACTCATCACCACGATCTCAAGCTGCCAGCCATTCTAAGTTAATTTTCAACGCATACATACCCCACGTCTCCCAATTACAGGTGTAATTCTCTTTCTTTATCTCCTTTAATTTCCTACCTTCCAAACTTCCTTACTGCATGCCTCACACTACTCATTCTTCAATCTTTAATTTAATATAAGATAGAGTGGAATATTTTCATACCTATGTCTCTCAAGACCTACTTTGAGACTTAGTCAGATGTTACATAATTATTGGCATATGTGATGATTCAGTTCAGATGTTTTCCTATGGATAGTGATACAGCCATTCCCTCTATTAGCATTACTATAAATAGAGTGTTTCTCCAACTTTGCCGTTCAACCATTTTAAACAAACAGTGGAGCTTCTTATTCTACATTAGACTCTCTCTCTCTCTCTCTCGCTTATAGTTACTGGCATCCAAAGAAAAAGCAAA


Gene Sequence:
>Vu_34192(+)
ATGGAGCCTATTGAGGAGATCTCTCAAGAATGGATGAGTTGTCTTAGTGAAGTGTACACAGAGGAGGAAGCTGACTTCATGAACCAGCTGCTTGGTAACTGCTCAATCCCAGAACAGTTATACGAAAGTTTGAACATGGAAACAAAAGCTCCAAATGCAGATTCTATCTTGTTTTTACAAGGGAGTGGGTCCTGTGATCATGCTACCAAATATATCTTTCCCACAACAAATGCTGGCAACTGCTCCAACAATTTGGGCCACGTGTCCATTGGTTTTTCCTTCCAAGAGTTGGGTCTTGACTCAGGGAGAGAGAATCTTGCCGACATGGATTTGCAGGATCACAATGCACGCCAAGTATTAGTTTCCGAACCAGAAAAGGATAATACCAGAAGCATGGAGAAATCAGAAAAAAGGTTTAGGAGCTCATTTGAGGTAGAATACCACCAAGTTTAATTCTTCTTCACATTCACTAGTATTATTACTCTTTTTTCGCATTTCCTTCTCATGCAGAATTCACCGTGTTTGTCTTCATGAAATTTTCATATAGGGCCCAGAGAACAAGAGGAATGTGAAATCTAAGAAGAATCCAAAACCAGCTTCTTTAAGGAACACTGAAGAGGAAGCAATTCCTGAGCCTCAGAGTCAGACCTTAAACAGTTGTTGTTCAGATGATGACTCCAAAGATTCTAGAGCACTGAAGTTAAGTGGAAAATCAAGATCTAATAGAGACCCTGCAACTGATCCACAGAGCGCGTATGCAAGAGTAAGTCCTTTTGCTGATTGCTGACACTTCATGATACTGTTTTGCATGCTGTCCATTTAATTCGAGGGATTGGCTCTTACATTTTGCATTGTGCAGAAGAGAAGAGAAAGAATAAACGAAAGACTGAGAATTCTACAGAACCTAGTCCCAAATGGAACTAAGGTGGATATCAGCACAATGCTTGAGGAAGCTGTGCAATATGTGAAGTTTTTACAGCTTCAAATTAAGGTAACAACTTGGTTATCCTTCTTACTTTGGCTGCATCTAAAATTTACCAATATCTTATCTTTGAAAAGACACAATAACTGATACTATTTCCCACGTTTAAATTTGAACAGCTTCTGAGCTCTGATGATCTGTGGATGTACGCTCCCATTGCTTACAATGGAATGAACATTGGCCTGGAACTTAACATCAACATCACAAAACAAGAAAAAAAATGCATATCATAG