Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_34561 LG10 12239167 12239727 PREDICTED: ethylene-responsive transcription factor ERF039-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   abscisic acid-activated signaling pathway, oxoacid metabolic process, response to jasmonic acid, regulation of transcription, DNA-templated, response to light stimulus, regulation of transcription, DNA-templated, abscisic acid-activated signaling pathway, organic acid metabolic process, response to salt stress, response to water deprivation, flavonoid biosynthetic process, oxoacid metabolic process, regulation of transcription, DNA-templated, signal transduction, organic acid metabolic process, abscisic acid-activated signaling pathway, response to water deprivation, abscisic acid-activated signaling pathway, response to salt stress, response to wounding, response to jasmonic acid, regulation of transcription, DNA-templated, pigment biosynthetic process, response to water deprivation, response to light intensity, flavonoid biosynthetic process
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
G/C 12239257 stop_gained p.Tyr157*
A/G 12239290 synonymous_variant p.Ala146Ala
G/T 12239305 synonymous_variant p.Leu141Leu
A/T 12239362 synonymous_variant p.Ala122Ala
T/C 12239365 synonymous_variant p.Arg121Arg
T/C 12239372 missense_variant p.Gln119Arg
A/G 12239386 synonymous_variant p.Cys114Cys
C/A 12239446 synonymous_variant p.Pro94Pro
G/A 12239563 synonymous_variant p.Leu55Leu
G/A 12239587 synonymous_variant p.Pro47Pro
G/T 12239589 missense_variant p.Pro47Thr
A/G 12239614 synonymous_variant p.Gly38Gly
T/A 12239681 missense_variant p.Lys16Met
C/G 12239683 missense_variant p.Lys15Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_34561.1
MEEKKRNEADEAKKKKNKKRESEEKQRMYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAALTIKGTSAFLNFPELASHLPRPPTTSPKDIQAAAAEAAALNCDAQPQARAQARAQAQIMPDGDDAFLDLPDLLADSSQSAGGFGYSASWFVAAPEHLDSAFRLDDPPFPWDSSL*


CDS Sequence:
>Vu_34561.1
ATGGAAGAGAAGAAGAGAAATGAAGCAGACGAAGCAAAGAAGAAGAAGAACAAGAAACGAGAGAGTGAGGAGAAGCAGCGAATGTACCGTGGGGTACGCATGCGTCAGTGGGGTAAATGGGTGTCGGAAATAAGAGAGCCCAAAAAAAAGTCCAGAATCTGGCTCGGCACGTTCCCCACGCCAGAAATGGCGGCTCGAGCCCACGATGTGGCCGCGCTCACTATCAAAGGCACTTCCGCTTTCCTCAATTTCCCCGAACTAGCCTCACACCTTCCGCGCCCGCCCACCACTTCTCCTAAAGACATTCAAGCCGCCGCCGCCGAAGCTGCTGCACTCAATTGTGACGCCCAGCCTCAGGCCCGAGCTCAAGCCCGAGCCCAAGCCCAGATTATGCCCGATGGGGATGACGCGTTCTTGGACCTCCCTGATCTTTTAGCTGACTCAAGTCAGAGTGCAGGTGGCTTTGGTTACTCTGCGTCGTGGTTCGTAGCCGCACCTGAACATCTTGACTCTGCTTTTCGGCTCGATGACCCTCCTTTCCCCTGGGACTCTTCACTTTAA


Promoter Sequence:
>Vu_34561::LG10:12239727-12241727(-)
AATGGGCAACAAATAATACACTTTTGCCAACTAATTTTGGTAATGTCATAATTAATTCAAACAAAAACAATACATTGTTCCAGTATATTCTTACAGTACAGGATAATTGATGTCAAGTGTTAAATTATTAAAATTTATATTATTTAATATTTTCAAATATGATTTTAATTGAGGACTTTAGTTTCCATTGCTAATGTATACATTGGTATACAGTCAACTCATTAATCAGTAATTGCATATATAAATTTTAAGACAGATATTGCAAAGATTTAAAAAATTATCATATTTGATAATTGAAAATATATTGCTATTGTATATATTTTTTTTATGTTAAACTAACTTTTAATAAGATTAAAAGATAGTCTTAAATTACTCAATAAATGAATTAATTAACTGTTTTAGAAGTTATTAATTGATATAAAACTTTGACACTATTTGTTATTTTTTTTTAAAAGATGGAAAATATAAAAGTATTCTCAATTGAATTTTTTGATTTTTAATGTTGTTTTAATATTATTTCTTCAAAAATATTTTATATATTTTATAATATGAAAAATCAATGTATTCTAAATACTAACACGAAAATTCAATAAAAAGAAATCTAAATTCTATTAATTAACTACTTATCACGCATTACTTGATTTCAGCAATAAATGAAACAACGTTAAATTGTGAATAATTTGAATTACGTTTAGTTCTAATTTCAGAAGTATTTATTGATTTTATGATGTGTCGCTGATTTTGAACTTTATTTTATAAGAAATTTTTATTTTTCAAAACCCGACCATTTTTTTGTTAAGTACAATTTCCCTTTATTGCGTTATCATCGTGTTCTTTTTTTTAATTTTGTGTATTATTTGTTGCTGAAAATGATTTTTTAGAAACAAATTCTTAGTAACAGTTTTTTATACACTTTTATCTGTATTAAATTACTTTATTAAAAAATAAATTTTTACAAATTGATGTGAATATATTGAAAAATATATATTTAATTTAATATTTATAAATTGTTTGTAAATAAAAAATTTGAAGAGTGATTATAATAAGTAAGATAATTTAAATATATTATAATTATGATAATATAAATATTATCTTTCTATTATCATAATAATATATGATAATTTAAATTTAAAAATTAATCACATAGACTGAGTAGAAACCACTGTATTCATAAGGGATACTAAACGACAATGGCTTTACTGTCTGGGGACAAGTATACAATATAGTATTATTTTTATGGGCCCACTTCGAACAGAAAAAAACACGTGCAAAATTGAAGATAAAATAACTTTTTTAAAAAAGTGAAATAAAATGATATTGGCTTAGTGGTCCGCATTATCTTTTTCTTTTTGATATTTTGTTTTTCCATTTTAATAACTTAGGATTAATTGAGGACAAATACAGTGACGTGGACAGAGTGACACCTAACGTTTGACAAAACATCGATTACGTTGCAAAAAGATTTTACTTTATAGTTATAACTTTTGCACGACACTTTATTTAATTAACTTTCCACTTTCTTTAGAAAAATTCATTTTTCAATTAAGAAATAACTATTTAAACTCAGTAAAACAAGGTGTTTAATCAGAAAATCTCACAAGGTTATTTTAATAAATTTATTTTTACAAATATAATATTATTATTTTTTATTTCATATACTTGAAAATTTGTTAAGGCAACCGGATTAGTACACTGTAAAGCTTAGGATTTGATATGAACATTAAAAAGTGAAATAAATATTGTAAATTTTATAAAAAAAAATGTACTATATAACTTTGCATATATTATAAAAGAAACATTTTGAAAACGATGTAGCAGTATAACAAAACAACAATACAATAAAAAAATTGATAAACTGTCACTCAGTTGTAGAAAATGCCATTTCTGTGTTGGAATAGGACCCATTTCTTAATGTGGAAAAATTGAAAGTAGCAGGAAGCATTATTTGAGGGCAGCTAGCTCCATTGACTCCATAACTTCTGAATCTAACCGGCAGCCAC


Gene Sequence:
>Vu_34561(-)
ATGGAAGAGAAGAAGAGAAATGAAGCAGACGAAGCAAAGAAGAAGAAGAACAAGAAACGAGAGAGTGAGGAGAAGCAGCGAATGTACCGTGGGGTACGCATGCGTCAGTGGGGTAAATGGGTGTCGGAAATAAGAGAGCCCAAAAAAAAGTCCAGAATCTGGCTCGGCACGTTCCCCACGCCAGAAATGGCGGCTCGAGCCCACGATGTGGCCGCGCTCACTATCAAAGGCACTTCCGCTTTCCTCAATTTCCCCGAACTAGCCTCACACCTTCCGCGCCCGCCCACCACTTCTCCTAAAGACATTCAAGCCGCCGCCGCCGAAGCTGCTGCACTCAATTGTGACGCCCAGCCTCAGGCCCGAGCTCAAGCCCGAGCCCAAGCCCAGATTATGCCCGATGGGGATGACGCGTTCTTGGACCTCCCTGATCTTTTAGCTGACTCAAGTCAGAGTGCAGGTGGCTTTGGTTACTCTGCGTCGTGGTTCGTAGCCGCACCTGAACATCTTGACTCTGCTTTTCGGCTCGATGACCCTCCTTTCCCCTGGGACTCTTCACTTTAA