Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35036 LG10 16962664 16964087 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, anther development, regulation of transcription, DNA-templated, axillary shoot meristem initiation, stomium development, axillary shoot meristem initiation, maintenance of shoot apical meristem identity, stomium development, stem cell population maintenance, stomium development, stomium development, regulation of transcription, DNA-templated, stomium development, regulation of transcription, DNA-templated, anther development, anther development, axillary shoot meristem initiation, regulation of transcription, DNA-templated, axillary shoot meristem initiation, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, anther development, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding
SNP Position Effect Amino acid change
C/A 16962871 missense_variant p.Glu214Asp
G/A 16962879 stop_gained p.Gln212*
A/G 16962943 synonymous_variant p.Tyr190Tyr
G/T 16962947 missense_variant p.Pro189His
C/T 16963576 missense_variant p.Cys145Tyr
A/T 16963675 intron_variant
G/A 16963784 stop_gained p.Gln102*
C/A 16964024 missense_variant p.Gly22Cys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35036.1
MMEPQQPQGSQPNDEGASGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRPPAPSNALPWKPDQDPPIHTNYSNISSTGISSASSSSVEIITVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGINHNLGWVGVDPYSSPYANFFGKIRPTEETLEEEQEEDGAAEIETLPLFPMHGEDIHGYCNLKSNNSYNYDGNGWYHSEDGFKNGSRASLELSLNSYTRRSPDLA*


CDS Sequence:
>Vu_35036.1
ATGATGGAACCTCAACAACCACAAGGGAGCCAACCAAACGACGAGGGTGCCAGTGGAAAAGGGGGCTTTCTCAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGACCAGATTAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGACCTCCTGCCCCATCTAATGCTCTTCCTTGGAAACCTGATCAAGATCCTCCTATTCATACCAACTATTCTAACATTTCTTCTACGGGAATCTCTTCTGCATCATCTTCTTCTGTCGAGATCATTACTGTCGGACAGATGGGGAATTATGGCTATGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGACTGTTCAATATCTGCTGGGGGTAGCAGTGGCCATGTTGGAATAAACCACAACTTGGGATGGGTTGGCGTGGATCCTTATTCCTCACCCTACGCCAACTTCTTTGGAAAAATAAGGCCAACTGAAGAAACCCTGGAAGAAGAACAAGAAGAGGATGGTGCTGCTGAGATTGAAACTCTCCCTTTATTCCCTATGCACGGTGAGGACATTCATGGCTATTGCAACCTCAAGTCTAATAATTCTTACAACTATGATGGAAACGGCTGGTATCATTCTGAAGACGGCTTCAAGAATGGTTCTCGTGCTTCTTTGGAGCTCAGTCTCAACTCCTACACTCGCAGATCTCCAGATTTAGCTTAA


Promoter Sequence:
>Vu_35036::LG10:16964087-16966087(-)
TAGAAGGCTAAGGAGAGAGAGAGAGAGAGAGAGATATGGAATGATCTTTGTGATGTATGTTTGGAGATACGGGAAGAAAATTAGTGCAAAGAAGATGATTACCCGTAAGACTAGGGAGTGTACCACTGCGGCTGTGAGGTCTCTCTAGCTTATGAGGTAAGCACTTGAGGAGGATTTTGGAGGAGAGAGATTGGGTTGAAAAATGAAGTGTTGCTGCTAAATCAAAGAGAAGAAGAATGTGAGCTTTTAAAAATAAAATGAACAATAATCTGTGTGTGCGTGAGAGAGATTGCCATGTAAATGCATGATAAGGAAAGCCAAATCTCATGATGGCGGTGTCAAAATCAAGCAAATTATGCAATCTGAAAAAGTTGAAACATTGAGACACGTACACCAAGGATTGAATAACGTTCAAATCAGTAGTATATTGTTTCCAATGTTTTTGTTTTGTATCAAACATCAAATGAACCAGACTGTTACAACAGAATGAGTTCAGAAAGGAAAGATTGAATAGTTCCATCCACACTAGTTTCCCTGATTGGTTCGTTTTTATGTAAAACTTGTACAATGGTACTATTTTACTGTAGACTTATATGCACGAGAGGGAACCCAAAAAGCACTGCCCACTTCTTCTCTTTTCATTTCCCCACTACATACATGTCTTTTTTATTACTATTTTTTTTTTAATTTTCGAGTTAAATATGTATAAAACTATAATGTCCCAAGAGAAGCCTATGTACGCACCCACATGCCATGACATGACCCAGTTGATCAGTACATAAAATTATGGACATGGATAATTTATTTTATTTATTAATTTATTACAGAGTGGTAGTAGTTTAGAAATCTGCAATGTTACGGTGGAGGATGATAGTTATCAATAAATAAGGATACGATTGTGAAAATAATTGAAAATAGAAAAATGTGAAAGAGTTGACAGAAGAAAATGAATTTTGTGTGGTTGAGGATTAATAAGTTGAAAGGTACATATAACCAAAACAGAGTTTGAGAAGAAGTGTTTACTTTATTTTTCTGTTTTTGGTGACTGCTGTTGTGTTGAAAGTTCAGGCATGCGAAGAAAGAATTAGAAATGAGCTTTTAGGATATCCCTTTTCTCTCAACACTGTATATTTTCAAAATCTTTGTCACATAGGGTGTAGTCTTGGTTGCACACGCATCATCTACTTCACAAGTACAACTTCAAATTATAAAAAAGCAAAAAGGAAAAACAAGAAAATTGGATGTATGAACATAACATAACATGTACATGCTTGTTGATGCATTGGTTGGGAATGATGAGAAGTTAAGAAATACATTTTTGCCCTTCCTCAACGTCCACAAAGATGAACATAAGATGTAGATGCTTGTTGATATATAAGTAGTACAGTATATCTTGGTAGCATATAGAGTAGGGTTTTGTACATGTATATACACATGTGTGTAGGGGCCATATGTGATATCTCTCGGCTCCATGAAAAGAAGAACCTATTGAACTCCCAAATGACAACCCGCATCATTCCATTCCATTCCATTGCCATTCATTCATTCTTTCATTCAGAACATCTACTTTTTTGCTTTCCTTTCATCCAATATATCATTTCATATATTTTTCTACCTTTTTCTACTTTATTTCACATATACCTGGTCATGCCTTTTCGTCCAAGTAATTCCTGATAGTACCCTCACTTTCTAAGCTCTCTTTTGTCCCTTCCCTTTTTATGAACACCACTCTGTCAACCTCAGTCCTTATCTCCCAGATATTTTTTGTGATTTTCTCTCTTTATCACTCCATGTACTATGTGCCTGTGCCTCATCTATAATGACACCTATTATAATAAGTTCATATCATCGCCTCGATCACCTTCATTTCCTCCAATTCAATTCATGCACTCTCCCTCCTCACCTTACCTACCCTCTCATTCTCTTTCTCATTCTCATTCTCATTCTCTCTATCCAACAAACAACATTCTTTTTTGTTGCCTTGTCTTTGTTTCCACTCC


Gene Sequence:
>Vu_35036(-)
ATGATGGAACCTCAACAACCACAAGGGAGCCAACCAAACGACGAGGGTGCCAGTGGAAAAGGGGGCTTTCTCAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGACCAGATTAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGACCTCCTGCCCCATCTAATGCTCTTCCTTGGAAACCTGATCAAGATCCTCCTATTCATACCAACTATTCTAACATTTCTTCTACGGGTAAACCCTCTCTTCATTTCTCAACCATATACTCTTTTACTATGTCTCTCACCTTTTATTGTGCTTATATATCCAGGAATCTCTTCTGCATCATCTTCTTCTGTCGAGATCATTACTGTCGGACAGATGGGGAATTATGGCTATGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGTAAGTTATAAACGACTCTTAACTTTGGATTTTACATATTAGCCTCAAAGACTTTCTGTAATTTTTTACTCTCCTACCGTTGCTCATCAATGCAAATTTAGCTTTGTGATGCATTAAAATGGAAACTAATATCCATGATCCATCACACTCCATGTGCAGTGCACAAGTAAGTGATGATCTTTAACAACAAAATGTAGCGACAATCAGTCCTTTACACTGTTCATTCCTTGAAAGTTCCATAAAAGGAAGAGCCAACCCCACCGATCTCTTCACTCTTCTAAAACGACAAAGCAATGTGTGAAAAAATTTTCATGAAATAAAACTACATTTATGTTGAAGCCACCAGCTCGTAGGAGTGAATACAGATAGAATACAAAGTTTAAACAGTAGCTCACCAGATTTAGAAAAATGTTTTGTACAGAGTTATTAAACCATTTCAATCAAGTGTAAGTGTTGATTAATTCTTCATTTGTTTTAAACCCTTATAATTTTTCAGGACTGTTCAATATCTGCTGGGGGTAGCAGTGGCCATGTTGGAATAAACCACAACTTGGGATGGGTTGGCGTGGATCCTTATTCCTCACCCTACGCCAACTTCTTTGGAAAAATAAGGCCAACTGAAGAAACCCTGGAAGAAGAACAAGAAGAGGATGGTGCTGCTGAGATTGAAACTCTCCCTTTATTCCCTATGCACGGTGAGGACATTCATGGCTATTGCAACCTCAAGTCTAATAATTCTTACAACTATGATGGAAACGGCTGGTATCATTCTGAAGACGGCTTCAAGAATGGTTCTCGTGCTTCTTTGGAGCTCAGTCTCAACTCCTACACTCGCAGATCTCCAGATTTAGCTTAA