Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35071 LG10 17328812 17329849 PREDICTED: protein FD-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of transcription, DNA-templated, regulation of flower development, regulation of flower development, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of flower development, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, regulation of flower development, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of flower development, regulation of flower development, positive regulation of flower development, regulation of transcription, DNA-templated, regulation of flower development, regulation of transcription, DNA-templated, regulation of photoperiodism, flowering, positive regulation of flower development, regulation of flower development, photoperiodism, regulation of photoperiodism, flowering, regulation of flower development, regulation of flower development, regulation of photoperiodism, flowering, regulation of flower development, regulation of flower development, positive regulation of flower development, regulation of photoperiodism, flowering, positive regulation of transcription, DNA-templated, regulation of photoperiodism, flowering
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, protein self-association, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding
SNP Position Effect Amino acid change
T/A 17328975 intron_variant
A/T 17328990 intron_variant
C/A 17329019 intron_variant
C/T 17329029 intron_variant
A/G 17329188 splice_region_variant&synonymous_variant p.Ala162Ala
A/T 17329436 synonymous_variant p.Ala138Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35071.1
MEEVWKDINLATLNDQVTRSATTHSNLGGVILQDFLARPFTMDPPNTILSSQTPSLYGAPSSPAPPLLTALSLSSHPHLHFDPHTQKPSHPHHPPPPSNHSCFTTPTTASLGAKRFAEPDCNLGDRRNKRMIKNRESAARSRARKQEKFSFTFSLSLIFPTAYTNELEVEVEQLKEENARLKRQQKQLSEVAASEQKKKSSLYRASTAPF*


CDS Sequence:
>Vu_35071.1
ATGGAAGAGGTGTGGAAAGACATAAATCTTGCTACCTTAAATGACCAAGTCACACGCTCCGCAACAACGCACTCCAACTTGGGAGGAGTAATCCTCCAAGACTTTCTCGCTCGACCCTTCACCATGGATCCACCAAACACCATTCTTTCCTCTCAAACTCCCTCCCTCTACGGCGCCCCCTCCTCACCGGCACCACCACTCCTCACGGCTCTCAGCCTGAGCTCACACCCCCACCTCCATTTCGACCCTCACACTCAAAAACCCTCACATCCCCACCACCCTCCTCCACCTTCCAACCACTCTTGCTTCACCACCCCAACCACCGCCTCCTTAGGCGCCAAAAGATTCGCAGAACCCGATTGCAACCTCGGAGACAGAAGAAACAAGCGCATGATCAAGAACCGCGAGTCCGCTGCACGATCGCGAGCCAGGAAACAGGAAAAATTTAGCTTCACCTTTTCGCTCTCCTTAATTTTTCCGACCGCTTACACGAATGAATTGGAGGTAGAAGTTGAGCAATTGAAGGAAGAGAATGCAAGGCTGAAAAGACAGCAAAAACAGCTGAGTGAAGTTGCAGCCAGTGAGCAAAAGAAGAAGAGTAGCCTATATCGAGCATCTACGGCTCCATTTTGA


Promoter Sequence:
>Vu_35071::LG10:17329849-17331849(-)
TAATTTCATTCAATTTGAACATAACATAACAAATTCTTGATCAATATAGTGACTCAATAACTTGATTGGGTGTGAAGCAAAATTGACTTAGTTCAATTTAGACTTTGATGGACTTAGCTTTGTGCGTTAGTCCATATTCACACAAAAAATTATTAGAATAATTATAAATTATAGAAGAAATAAGATAATTAATAATATATTGTAATGTGTTCTTGATAAATCAAATACTAATATATTGTAAAACGATACTTAATATCGATATTCTATAATCATATTTTATTATAAAAAAATATCTTATTATTATTGTTTTGAAAATTTATTCGTGGATGGATTTCACTTATTTCCTACTAAAACATATGAAAATATTAATATGAATATAAAAAACTATTAGGAGTTCAGTATATTAAATATTTTCATAGAGGTGCACTTGCACTTATTTATGAGATTATGTTTCTTAAATAAAACTAATAAATTGTAAATTCAATGGTAAGTGAAGTTATATATAATGTAGAAATAAGAAAACTTAAAATAGTAATCCTTGATAACTTATTATCATAATATTTTAAATTAAAAGTAATATGAATATCTTATATGAATTGCATTGATATCTCATTATTATTTCTGGTGAATTCTTGAAAGATATATAAAAGATAATATAATTATATACATATATTTTATTTAGGGTTCAGAATCAAAGCAATTTTCTTGGTATTGTAACTGCACACATCGAATCAAGATATATAATTAATTGTCATGCTTTGTGTTAACTATGAACACAGGGTTTGACATGTAACATTAAGAACTTACTTACCACAACAACATTAGACAAAGGTACAGTTCCTGTCTCATGTTAACTCTTATGTGATAGGTATCGAAATATCTCGATGTTTGGATTAAGAATTTTGTCTTCAAATAGTGGAAAATGGTTCTTAAATGTACAGATACTTTTCATGATTAAACAGGTGTTATTTTCCCTTCTCGTAACCCAAGGCCCTGATTATTAGCTTGAATCTAAATATTCCTCGGGCTTATATGAAATTCAAGATTTAATGTTTCATTTTTTTGTGCCCTCAATGTCAATTTTATTTAGAAACCTGGACACGAACAACCTCTGGAGAAAAGATGAATACAAAATATTAATTATTGTCCTTTATTGTGCACATGAAAAGCTTTTTTTGTTGGTTCGCACATGAAAAGCTTCGATGGTCCACATTGAGTTTCTTCAATTGGCAAACAGCTAACATCATCATGCATCGAAAATATGCATAGGATCAAGCATTAAAGTGGTCCCATTTCTCACAACATCACTTCCTTCTTCTTGTAGACCATGATATAATAATCCCAATTTGACAATCCACACTTTGTTGTTTAAGTAGTGTTTAAATTTAGAAGAAAAAAAAGAGTGTAAAATACAACCTCAAGAGCTTCTAAAATAAGTGTTACTTGGAGTATATAAAATGACAAAAATATATATATAAATAGAGAGAGAGAGAAAAAAAAAGTTGACAAATTGTTAATTAGGATCATCATGTATACATATAAAAAACCACTTAAGATAAGATGGTCTCTTAAAATCAATAATTGGGAGTTAAAATTTTAGTTAACATGTTGATAAAAATAGGTATTTAATGAAATTATGAAGTGAAAAAAAAAAGTGTAGTTGAATTAATTTAACAGGTGAGAAAATGGAAACTGGGAGGGGAGGGTTATGATTTATCATTGGCTAGGGTTTTGGCTGGCGCATGTCACGTGTCGAGAATCCGACATGACTACTCACACAGAGTGCACAGAGATCTGCAAAATATAGAACAACCACCAAACACAAACTTGACTCACCCTCTTCTTTCTCTTTCTGTTTCTGTTTCTGTTTCACCTTCTCAACCATTTCTCGGTCTTTAATAAGCTAGAAAAGTTTGCAACATTGCCGAATCCTACCAAACAAGGTCATCATAAAATTCCCTAAAAATCACAATCACACTCATCACTTTCTCCTTTCAACA


Gene Sequence:
>Vu_35071(-)
ATGGAAGAGGTGTGGAAAGACATAAATCTTGCTACCTTAAATGACCAAGTCACACGCTCCGCAACAACGCACTCCAACTTGGGAGGAGTAATCCTCCAAGACTTTCTCGCTCGACCCTTCACCATGGATCCACCAAACACCATTCTTTCCTCTCAAACTCCCTCCCTCTACGGCGCCCCCTCCTCACCGGCACCACCACTCCTCACGGCTCTCAGCCTGAGCTCACACCCCCACCTCCATTTCGACCCTCACACTCAAAAACCCTCACATCCCCACCACCCTCCTCCACCTTCCAACCACTCTTGCTTCACCACCCCAACCACCGCCTCCTTAGGCGCCAAAAGATTCGCAGAACCCGATTGCAACCTCGGAGACAGAAGAAACAAGCGCATGATCAAGAACCGCGAGTCCGCTGCACGATCGCGAGCCAGGAAACAGGAAAAATTTAGCTTCACCTTTTCGCTCTCCTTAATTTTTCCGACCGTGGGATTTAAGTCCCACAATTCTAGGTTTAACTGAATCTAGTAGTTCCGCAAATTTAGGTCGAGGATAAAAACAAAACAAAAAAAAGTGTCATGAGGTTAAACGAAACAAATATCACTGTTGGCAAACTGGATGTATTACGCGCCTTACACCGTTTTTTTTTTTGGTCTCTTCAGGCTTACACGAATGAATTGGAGGTAGAAGTTGAGCAATTGAAGGAAGAGAATGCAAGGCTGAAAAGACAGCAAAAACAGGTATGTTTCTGGTTGGAGAATTTCCATTTGTGTATAGGGGGTTGAATGCGTTTCACAAATAACATTAAGAAGAGAGATAAAATGACAGAATTTGGGAACATACTATAAAAAAACAGAAGTGGTGTGATTAATGTCCTACGTCATTGTATAGCTAAAAAAGTGGTTGATGGTTTGATGTTGCACTGGTAGTAGTAGAAGGTGATTGTGTCCCTATTTGACTGCATTTCAGCTGAGTGAAGTTGCAGCCAGTGAGCAAAAGAAGAAGAGTAGCCTATATCGAGCATCTACGGCTCCATTTTGA