Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35304 LG10 20301530 20303732 PREDICTED: myb family transcription factor PHL11
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of phenylpropanoid metabolic process, regulation of transcription, DNA-templated, regulation of phenylpropanoid metabolic process, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of phenylpropanoid metabolic process, regulation of transcription, DNA-templated
Cellular Component   is active in   cellular_component
Molecular Function   enables   DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity, protein binding
SNP Position Effect Amino acid change
A/G 20301539 synonymous_variant p.Tyr263Tyr
C/A 20301577 missense_variant p.Ala251Ser
T/A 20301632 missense_variant p.Glu232Asp
T/C 20301644 synonymous_variant p.Lys228Lys
T/G 20301684 missense_variant p.His215Pro
T/A 20301894 missense_variant p.Glu145Val
T/A 20301904 missense_variant p.Met142Leu
A/G 20301970 downstream_gene_variant
G/A 20301981 downstream_gene_variant
G/A 20302039 downstream_gene_variant
T/G 20302083 missense_variant p.Arg124Ser
T/A 20302085 stop_gained p.Arg124*
A/T 20302134 downstream_gene_variant
G/A 20302161 downstream_gene_variant
C/A 20302200 downstream_gene_variant
T/G 20302241 downstream_gene_variant
T/C 20302245 downstream_gene_variant
A/T 20302276 stop_lost p.Ter110Argext*?
A/T 20302399 downstream_gene_variant
A/T 20302412 downstream_gene_variant
T/C 20302415 downstream_gene_variant
A/C 20302562 synonymous_variant p.Leu74Leu
C/A 20302614 downstream_gene_variant
A/T 20302680 downstream_gene_variant
C/G 20302711 downstream_gene_variant
C/T 20302725 downstream_gene_variant
T/C 20302841 downstream_gene_variant
C/T 20302990 downstream_gene_variant
A/G 20303019 downstream_gene_variant
A/C 20303192 downstream_gene_variant
T/C 20303238 downstream_gene_variant
G/A 20303268 downstream_gene_variant
C/T 20303376 downstream_gene_variant
A/G 20303619 synonymous_variant p.Val38Val
A/G 20303640 synonymous_variant p.His31His

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35304.1
MEGGGRESYNGVVMTMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEELNKENSRCSFVNFSTRSSGPNTTYRGDNEGGETPTEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSLDGSGGLEASRAQLTEFNSALSNFMENMNKDSKENIIEVTGFYNKNHGSAFHYEEVGREQNRDQKPKIEGGSIQFDLNIKGSNDLISAGGAEMDVNMISYRG*


CDS Sequence:
>Vu_35304.1
ATGGAAGGTGGAGGAAGAGAAAGTTATAATGGGGTGGTGATGACTATGACACGAGACCCGAAGCCAAGGCTAAGATGGACAGCAGATCTTCATGATCGCTTTGTGGATGCAGTTACAAAGCTTGGTGGCCCCGATAAGGCCACTCCCAAGTCTGTTCTGAGGTTAATGGGGTTGAAAGGTCTGACACTGTATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCGAAAACAAAACGAGGAACTGAACAAAGAGAACAGTAGATGTTCGTTTGTAAATTTTAGCACTCGTTCTTCAGGGCCTAACACCACTTACAGAGGTGATAATGAAGGGGGAGAAACCCCAACAGAAGCACTGAGGCATCAGATTGAAGTTCAAAAGAGATTGGAAGAGCAGCTCGAGGTACAGAAGAAGTTGCAGATGAGAATAGAGGCACAAGGGAAGTATTTGCAAGCAGTGTTAGAAAAAGCTCAGAGAACCCTTTCCTTGGATGGATCAGGAGGTCTTGAAGCTTCAAGAGCTCAGTTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAAGAAAACATAATAGAAGTGACAGGTTTTTATAATAAGAACCATGGCTCAGCTTTCCATTATGAGGAAGTAGGGAGAGAACAAAATAGGGATCAAAAACCCAAGATTGAAGGGGGTTCAATACAGTTTGACTTAAACATTAAGGGTAGCAATGATCTCATATCTGCTGGTGGGGCTGAAATGGATGTCAATATGATTTCATATAGGGGGTAA


Promoter Sequence:
>Vu_35304::LG10:20303732-20305732(-)
TAAATCATTTAATCATTCCATGAGATTGTAAGTTTGAAAATTCAAATTCGAAATAAAGGAATAAAGTAAAAGTTAAAAGCTTTTCATTTTTTTTGAAAAATCATATAATAAGGGCCTTTTTAAGTTTTGTTTTGAATTTTATTTGGTCAAATTTCTCCTTTTAAGAAGAAGAAAATTTTAAAATAACTCCACTTACATCTACCAAAAATGATGTGTGAAGAGAATTGTTATAAAAAGCAGTAAATGAAGAATCACCAACAAACCCTTTGGATTATTATGGTTGAGTTTCAAATCCGTGATTAATTGTCATTAACATAAGTTAACTTTTTAGCAGTCTATTAAGAGTAATTGTGATTAGTGGATAGAACAGTGTAAGAGATATATATGTAGTGTCTGAAGCTAATTAAGATGGACCCAGAAAGAACAAAAGGAATAAAATCCATGCAATAAAAAACGAGGAGAAGAAGATAAAAAGCAATAAGAAAAGACAGAAGAACTCTGTGTTAGATCTGGAAGATTATCACCTCTTCACGGACTAAACATTCCTGCAATCAACTTATTACTATTCAAACAATTTCATACCACATTATATACAAACTGTTATTTTTTTTATTTCTTTTTGCTGAATAAGAGGCTTGGAACAGAAAAAAATCCTATAATTATATATATATATATATATATATATATATATATATATATATATATAATCTTTGAAACAACTTATATATTATTGGACCACATTATACAAATTCTGCACCCAAGCAACAGTATTTGGGAAAGAACAGAACAGAACAGAACATTGTTTTGTTCTTTTGTTGTTACACATTTTGGATAAAAATAAAAAAAAAAGTCCCATTTTTTATCTCGTTCGTGTTTTATTTTATTTTTCAAAAACATGTTAAATACAATGGATAAATTTTACTAAATAATTTAAAAAAAAATTAATAATGGGGTATTGACAGTCTCCCACCTCAGTTCCTCCGCCGGAGAGGGAATATTCTTCCGTCGCCATCCTAACGGACAAACCAAAACGTGTTCGTTTCGTGGACCCCACTTCCCCCTCCCTCCAATCCAATCCATGTGATGTGACCCTCTAACTCTCATCATTCATTTTTCGCTAAATTCTCTCTCCTCCGAATCTTCCACGCTGGCATCCACGTGTCGCCCATCTCGCATTTTCGTCCGTTCGATTGCTTACCCTCTTTGATTATTCTCATCCAACGGTCCCCCAAGAAACAACCTTGCTCTATCTCCCCGATTAAATAACATAGTATCCACGATGTTATTTCGGATTCGTCGCCGAGATTTCCTCTAACATGTTCCTATAACTAAATTGTAGCTTCTAATTTCTACAACCTTATAATAATTCTCATATTATTAATTAGTCATAATACAGTATCATGTCATATATACATAATGCATTGCACCAAAACTATGCCTTCAGGCATGTATAATATTTAACGACAGTTAATTATTTATTACTACAAACAAAATAATTGAATTACTGTTACAAAAGAGCAATATAAAAGCCCATCAAACGCCGCATTTAATGCTTTTGTTATTACTAGTGTTGCTTCTTACGCCATAGAGCCACCTTTTTTTTTTTTTTTCTATTTTAGCCGCACTAGTGCTCTGTTTGTGTCTAATCAATGATGTTCTGTGCTGACTTGTTTGGTGTTTATGGTTTGGTTCCGATAGGTTATTATTGATAAGAATCAGAGTGTGTTTTCCTTTGGGGTGGTTTGTGGAATTACATATTCTTCTTCCATCAGTGTGCAGTTGCCAAGGGTATATGGTATATCTTCTTGTGGTCTAAGCTGATCCCTTCTTTTTCCTTTCTTCTTTTCCGCTTTTGGGATAGTAGAATGAAGGTGCTGTTTGGCTGAGGTATAAAGCAAAAGCTCTGCAAGTGGGATTATTGGAATTTTCTTTTTAAGTTGAAAAGAAAACGAGGGTGGTTGTAGTTGAATTGAAGGTGCAGCATAAGAAGTGAGTGAGTG


Gene Sequence:
>Vu_35304(-)
ATGGAAGGTGGAGGAAGAGAAAGTTATAATGGGGTGGTGATGACTATGACACGAGACCCGAAGCCAAGGCTAAGATGGACAGCAGATCTTCATGATCGCTTTGTGGATGCAGTTACAAAGCTTGGTGGCCCCGATAGTATGTATAGTGTTTGGATTTCAATTTTGAGAGTTGAAAAGCACTTTTACTTCACAAATTCTTCTGTCTGTGCTTTGTATGTTGAATTTAAAAAATGTGCATTATGATTCGTGAAAATATTTTCTCAACTTTTATCTTTGTTGGTGTTGTTGACACAGAAAAGTTAACTTGAGAGATAAGTTTTTGTTGAAACTGGAGTTCAGAAAGGGTAGAAAAAAAGGTGGAGTAACGGGGTGCTTTTAGAAACTACGATTACTTGCTGCACCAAATCAAGAAATTGGTTGGTCACAGAATTATGTATTTTCTATCAAACGGTTGTTCGTATAATCTGCATGCTGATGTAGGCTGAAATTAAAGTAGCATTTGGTGTTTCCCTCCTCTGTACATTTTTGCGGTACAAATCGTTGGTTCAAAAAGTGATGGAAATAACCAATCACTTTCCTTCAAGCTTTTTGCTCTAGGGGTTTTGCTTGTACAGCTAATGTCTCTGTGGGCTAATCCAATGTTTACTCAATCCTTATCATTTTGAATATTTTATAATCTTCTGTTTTAAGGCTGGTGAAGGTTTCTGCTTTGTTAGAAAACGACATTAATCTGAAATGTTTTGTTTTTTGTTCAGAGGCCACTCCCAAGTCTGTTCTGAGGTTAATGGGGTTGAAAGGTCTGACACTGTATCATTTGAAGAGCCATTTACAGGTAATTAGATTTAACTTGCATATACTAGATTTGATTCATGAGGGTACCGTTTACAAAATATAGAAGGAAAAATAGATGGAGAGTGAAAAGACAAAGTATATGTTATTTTGATTTGATATTATCATCAATTATTTAGTACCATACAAAAATCTTGTAGAAAGATGGAAACAAAGTAGTGTAAATGAAGGAGTGAAAATACTGAATTTATATGTGAATGGTATTTGGAATTCACGAAACATCAAAGAATTTTCTGGTTTTCTCCTAACCATCATCAAAGAATTACCATGTGGAGTCATAATTTTGCATTGTTATTTTGTTTATTTGCAGAAGTATAGACTTGGACAGCAGGCTCGAAAACAAAACGAGGAACTGAACAAAGAGAACAGTAGTGAGTCCGTTTGAAGTTTTGACAAACACTGAGTATACTAGGCAATTCTTTAACAAATCGTTTAGAACAGTTATCGCTGGATTTACCTTAAGAAACTACTTAAATAGAGAACATAAAAATCTGGAAATGTTTGATAATAACGTAATAATGTTCTTTCCATGTTTCTGTTTGTTTTTAGGATGTTCGTTTGTAAATTTTAGCACTCGTTCTTCAGGGCCTAACACCACTTACAGAGGTGATAATGAAGGGGGGTATGTTTCAGATCATATGCATAACTATAGTTTCTATGAACCAAATTCTCATCTAAATTTAGCCCTTTTAGCTTTGTGTAAATGCAACTCACTTCTTGCACTTGTTTGGTTTCTCCTTTTCCTAACTTATCTTCATATCTAAAATAGAGAAACCCCAACAGAAGCACTGAGGCATCAGATTGAAGTTCAAAAGAGATTGGAAGAGCAGCTCGAGGTATTTCTCAGTTTTAACTTGCATAGTTCTAAATTAAATTTTTTGTAAGATGTGATTTCTAATTTTCACTGTTCAACTATAGAAAATCTTGATTCACTTGTGTTAAACTTCTTTGTTGGCAATAGGTACAGAAGAAGTTGCAGATGAGAATAGAGGCACAAGGGAAGTATTTGCAAGCAGTGTTAGAAAAAGCTCAGAGAACCCTTTCCTTGGATGGATCAGGAGGTCTTGAAGCTTCAAGAGCTCAGTTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAAGAAAACATAATAGAAGTGACAGGTTTTTATAATAAGAACCATGGCTCAGCTTTCCATTATGAGGAAGTAGGGAGAGAACAAAATAGGGATCAAAAACCCAAGATTGAAGGGGGTTCAATACAGTTTGACTTAAACATTAAGGGTAGCAATGATCTCATATCTGCTGGTGGGGCTGAAATGGATGTCAATATGATTTCATATAGGGGGTAA