Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_35855 LG11 6440747 6442750 PREDICTED: lectin-domain containing receptor kinase VI.4-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, defense response to bacterium, defense response to oomycetes, defense response to bacterium, defense response to oomycetes, defense response to oomycetes, protein phosphorylation, defense response to bacterium, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, chloroplast, chloroplast
Molecular Function   enables   transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, protein kinase activity, kinase activity, transmembrane receptor protein serine/threonine kinase activity
SNP Position Effect Amino acid change
T/C 6440764 synonymous_variant p.Pro488Pro
A/T 6440872 synonymous_variant p.Thr452Thr
C/T 6440880 missense_variant p.Ala450Thr
A/G 6440974 synonymous_variant p.Cys418Cys
T/C 6441104 missense_variant p.Gln375Arg
A/T 6441202 intron_variant
C/T 6441206 intron_variant
A/G 6441260 intron_variant
A/G 6441279 intron_variant
A/C 6441306 intron_variant
C/T 6441311 intron_variant
A/G 6441326 intron_variant
C/T 6441330 intron_variant
C/T 6441345 intron_variant
T/C 6441352 intron_variant
A/T 6441354 intron_variant
G/A 6441388 intron_variant
C/G 6441389 intron_variant
C/G 6441390 intron_variant
G/C 6441396 intron_variant
C/T 6441402 intron_variant
C/T 6441414 intron_variant
A/C,T 6441422 intron_variant
C/T 6441427 intron_variant
C/T 6441447 intron_variant
G/A 6441449 intron_variant
G/A 6441464 intron_variant
C/T 6441475 intron_variant
C/A 6441512 intron_variant
G/T 6441515 intron_variant
A/G 6441526 intron_variant
G/T 6441553 intron_variant
C/T 6441583 intron_variant
G/A 6441585 intron_variant
G/A 6441633 intron_variant
C/T 6441634 intron_variant
C/G 6441637 intron_variant
C/A 6441661 intron_variant
T/C 6441665 intron_variant
C/A 6441671 intron_variant
C/T 6441687 intron_variant
C/T 6441688 intron_variant
C/T 6441694 intron_variant
C/T 6441707 intron_variant
A/G 6441711 splice_region_variant&intron_variant
C/T 6441712 splice_region_variant&intron_variant
T/C 6441718 missense_variant&splice_region_variant p.Arg345Gly
G/A 6441730 synonymous_variant p.Leu341Leu
C/T 6441741 missense_variant p.Arg337Lys
T/G 6441746 missense_variant p.Arg335Ser
C/G 6441747 missense_variant p.Arg335Thr
C/T 6441753 missense_variant p.Arg333Lys
C/T 6441773 stop_gained p.Trp326*
G/T 6441786 missense_variant p.Thr322Asn
C/T 6441796 missense_variant p.Val319Ile
A/G 6441798 missense_variant p.Met318Thr
C/T 6441834 missense_variant p.Cys306Tyr
C/G 6441839 missense_variant p.Leu304Phe
A/G 6441843 missense_variant p.Ile303Thr
A/C 6441854 synonymous_variant p.Ala299Ala
C/G 6441856 missense_variant p.Ala299Pro
C/G 6441896 missense_variant p.Gln285His
G/T 6441898 missense_variant p.Gln285Lys
A/T 6441945 stop_gained p.Leu269*
G/A 6441953 synonymous_variant p.Ala266Ala
T/C 6441958 missense_variant p.Ile265Val
T/A,C 6442012 stop_gained p.Lys247*
C/A 6442049 missense_variant p.Lys234Asn
C/G 6442075 missense_variant p.Ala226Pro
G/C 6442298 synonymous_variant p.Ala151Ala
G/T 6442299 missense_variant p.Ala151Asp
T/G 6442355 missense_variant p.Lys132Asn
G/T 6442533 missense_variant p.Thr73Asn
G/C 6442540 missense_variant p.His71Asp
T/A 6442638 missense_variant p.Glu38Val
A/T 6442685 missense_variant p.Phe22Leu
A/T 6442697 synonymous_variant p.Ser18Ser
G/T 6442698 missense_variant p.Ser18Tyr
C/G 6442706 synonymous_variant p.Leu15Leu
A/G 6442709 synonymous_variant p.Phe14Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_35855.1
MAPKTLFGLLIFLFLLVSSTAFSFTFHGFNESNITREEKAKIDNQGRLELTRRENNIVGHAFYNESIKILHKTASVQPKVFSFSTCFVFSIVSPSAGPGGFGLAFTIAPSTRFPQAEGGHLLGLFNSSNDMKSSNHILVVEFDTVNGYKDATDTVGNHVGVNKNGMSSNISEPAAYFVDGKKEEFNMEKADAVCVWIEYDGETEILNLTISPYLEPKPSKPLISEAVDIKSVMKESMFFGFSASTGKRKASAHYILGWSFALNGIAPPLDYALLPKPPPKEKHSQSFPWIKVIIGMLSALTFILLCLFLYVTLYKRYMVFETLEDWEMDCPHRFRYRDLHLATKRTGKASTSSDVYAFGVLLLEVVAGTRPVGSSDQFFLVDWVLENFQLGQILEVVDPKLDSIYEEEEVELVLKLGLLCAQNKAEYRPSIEQVTRYLNFDDPFPDISDCRYYDSQSSTTSLGFLEAMSTGKTSSSYSLPSIDRSTMSIEAGR*


CDS Sequence:
>Vu_35855.1
ATGGCTCCAAAAACTCTCTTTGGCCTCCTCATCTTTCTCTTTCTGCTTGTTTCTTCCACTGCTTTTTCCTTCACATTCCATGGCTTCAATGAAAGCAATATCACCCGTGAAGAGAAAGCAAAGATTGACAACCAAGGTAGACTTGAGCTTACAAGAAGAGAAAACAATATTGTTGGCCATGCATTCTACAACGAATCCATCAAAATACTTCACAAAACTGCTTCAGTCCAGCCAAAGGTTTTCTCCTTCAGTACATGCTTTGTTTTCTCAATTGTGTCACCAAGCGCTGGTCCTGGTGGCTTTGGTCTTGCCTTCACAATAGCTCCTTCAACACGATTCCCACAAGCTGAAGGTGGCCATCTTCTTGGTCTTTTCAACTCCTCCAATGATATGAAATCCTCAAATCACATCTTAGTGGTTGAGTTTGATACAGTTAATGGCTACAAAGATGCCACTGACACTGTAGGAAACCATGTTGGGGTGAACAAAAATGGTATGTCCTCAAATATATCCGAGCCTGCTGCTTACTTTGTAGATGGCAAAAAGGAAGAGTTCAACATGGAGAAGGCTGACGCTGTTTGTGTTTGGATTGAATATGATGGTGAAACAGAAATACTGAATCTCACAATATCCCCTTATTTGGAACCAAAACCAAGCAAACCTCTTATATCTGAGGCTGTTGACATCAAATCTGTCATGAAGGAGAGCATGTTTTTTGGTTTCTCTGCATCAACAGGTAAGAGGAAAGCAAGTGCTCATTATATTCTGGGGTGGAGTTTTGCATTGAATGGGATTGCCCCTCCATTAGATTATGCACTACTTCCAAAGCCACCACCAAAGGAGAAACACTCACAGTCTTTTCCTTGGATCAAGGTTATAATTGGCATGTTGTCTGCTTTGACATTTATCTTGTTGTGCCTTTTTCTTTATGTGACACTCTATAAGAGATACATGGTATTTGAAACTCTTGAGGACTGGGAAATGGATTGTCCTCACAGGTTCAGATACAGAGATCTTCACCTAGCAACAAAGAGGACAGGAAAAGCATCTACAAGCTCTGATGTGTACGCATTTGGGGTCCTACTTCTTGAAGTGGTTGCAGGAACAAGACCTGTTGGTTCATCAGATCAGTTTTTCTTGGTGGATTGGGTTCTCGAAAATTTCCAACTGGGTCAGATTCTTGAAGTGGTTGATCCAAAGTTAGATTCAATTTATGAGGAAGAGGAAGTAGAATTGGTTCTGAAATTGGGTCTGTTATGCGCTCAAAACAAAGCTGAGTATAGACCTTCTATCGAACAAGTGACTAGGTACCTAAACTTTGATGACCCTTTTCCTGATATCTCTGATTGCAGATACTATGATTCTCAAAGTAGCACGACAAGCTTAGGGTTTTTAGAAGCCATGTCTACGGGTAAGACTTCATCCTCGTACAGTTTACCCTCCATTGACAGGAGTACAATGTCCATAGAAGCTGGCAGATAG


Promoter Sequence:
>Vu_35855::LG11:6442750-6444750(-)
TCGTCTAAACTCAATAGTGTTCATTCTCTACCGTGCTCGATCTTTGACTGACATTCGGTTTTCTTGAGGATAAATTTATAAATAAGCTAAGTATTTATAAGAGTTCGGTTTCTTCATATGATTCTTTTAAGTACTATTATTTGAATGTATTATAGTGTCTGTTTCCATTGGTTTCGGCCTAGAGTCTTAGTACTCGATCTAGGCTTTAAGGTGTTTAGTCTAACTCTCATGGGTCAGTTCATCAAATTGACTCACTTTGTAAATAACGCTCGATCCTTTTAAATCTTGAGAAATATTATTGAACTTGGTCTCTTCCCAATCCCGATGGTAATTCTCCCTCGGTTTTGATCTATTCTGGAACTGGGAAACCTTTCGGTCTCAGTCCAAGTGATCGGTCTCGTTAAGGGTTAAAGTTGTACGTTCGGTATTTGGTAACTTAAGTGATCTTAGATAAAAGTGAAGTTTGAAAATGGAAGATGATGGAATATGATGTATATGAAATGAGCATGATTATGAACGAGTATTCCAGGGAGGAATATCTCATGAATGAATATTGAAATTTGGTAAAGTATGAATGTGGGCATGCTAAGCTGGCGGTTCATCCTGATGTTCCGTGATTACTCATTCTCACGTAGAGAAGAGTAAGTCATGTATGGGAACGGCAGGAGGTCCTAGTCCTTATGGTTAATTTGGACAGATAGGACTAACCTCGGGTGGCAACTGTTGAGGGTATCCCAGTTACTACATCACCCGGGTGCACGAACGTCGTAGCTACACAGACTTCATACAATCCGGACAGTCAGTCTAATATTAGGCTTTGCATGAGCGGGTGATGAATTATCTTGTTTGGTTTTGATTGTGTGAAATATATGTTTGTACATGAATTAGATTACATAAGCTTACCCTATGTTTCCTGTCTTGTCTGTTTTGTACGATCAGTTGTCCTTCTGTTGCAATGATCATCCATGTGGATGTGAGCATTAGGAGACGAGCTGCTAGAAGAAGCGTTGGAAGAAGAGAATTTAGTTGAGGTAGAAGTTAAGACCGAACGAATAGAATCGTTCGGTCAGTTTATTAGCTTAGTTTTAAGATGATCGTTCGATCATCTTTTCCCTCTTCTTTTGGTAGGACCGTTCGGTCGGGGTTTGCTTATGTTGTTCGATTTTAGTTTTCTAGTTCTTTCTATAAGGTCGTTCAGCCACAAGTTTACTTCTCTATATGTAAGACTCAGCTGTAATATTATTAAATGTGATTATTCTATTATATAATTTTAGACTGTATTTTTGGAATGTTACAAAAATTATTTCTCATATTATATACACCATCGTTAAATATTTCATTAAGAAAATAAAAATAAAAATAAAAATATATAAAATAAATTATAAATTTTTTTTATAAATAATATAATAAATATAAAGAAAATATTTTTCAATTTAGTAAATTAATTTAAAAAAGCATATTATTATCGTATAAAAGTATTTTTATTAACAAACACTACTAATTATCTTACATCTTACGCTTTTATTGTAAACAAATTTATATTAAATAATACTTTTTTATTTTTAACATTTTTGTCTTTTAGTTTAAACAACAAAAACCCGATGGTATACACGTTTCTCAGACTGTTACTCTTAGGAGATAGAATTTTTTTCTTGTCATGTTTGTGCACATGTGAAGCATTATGTTCGCGCAAGCAACCAAAACGAAAATATGTATGTCAATTGCGGTCTCTTGCAGAATCACTGATAATTTCTAATCGAAGAAGACTTCAAAGTTCAGTTGTCATGAAATTTATGGCAGAGAAATTTCAGCCCCATTTCCAACCACTTTCTTCTACACCACAAATGATAATAATGGTTTTACTTGTTCTCTGATGTATCATATCACTCACTTACATGTTATTTGGCATTTATACATACTTTTCTTTCTTGACCTTGTCCACTTGCTTTGAACCTATAAGTATATGCTTGGCATACATTTTTTGACATCAAAATTCTCAA


Gene Sequence:
>Vu_35855(-)
ATGGCTCCAAAAACTCTCTTTGGCCTCCTCATCTTTCTCTTTCTGCTTGTTTCTTCCACTGCTTTTTCCTTCACATTCCATGGCTTCAATGAAAGCAATATCACCCGTGAAGAGAAAGCAAAGATTGACAACCAAGGTAGACTTGAGCTTACAAGAAGAGAAAACAATATTGTTGGCCATGCATTCTACAACGAATCCATCAAAATACTTCACAAAACTGCTTCAGTCCAGCCAAAGGTTTTCTCCTTCAGTACATGCTTTGTTTTCTCAATTGTGTCACCAAGCGCTGGTCCTGGTGGCTTTGGTCTTGCCTTCACAATAGCTCCTTCAACACGATTCCCACAAGCTGAAGGTGGCCATCTTCTTGGTCTTTTCAACTCCTCCAATGATATGAAATCCTCAAATCACATCTTAGTGGTTGAGTTTGATACAGTTAATGGCTACAAAGATGCCACTGACACTGTAGGAAACCATGTTGGGGTGAACAAAAATGGTATGTCCTCAAATATATCCGAGCCTGCTGCTTACTTTGTAGATGGCAAAAAGGAAGAGTTCAACATGGAGAAGGCTGACGCTGTTTGTGTTTGGATTGAATATGATGGTGAAACAGAAATACTGAATCTCACAATATCCCCTTATTTGGAACCAAAACCAAGCAAACCTCTTATATCTGAGGCTGTTGACATCAAATCTGTCATGAAGGAGAGCATGTTTTTTGGTTTCTCTGCATCAACAGGTAAGAGGAAAGCAAGTGCTCATTATATTCTGGGGTGGAGTTTTGCATTGAATGGGATTGCCCCTCCATTAGATTATGCACTACTTCCAAAGCCACCACCAAAGGAGAAACACTCACAGTCTTTTCCTTGGATCAAGGTTATAATTGGCATGTTGTCTGCTTTGACATTTATCTTGTTGTGCCTTTTTCTTTATGTGACACTCTATAAGAGATACATGGTATTTGAAACTCTTGAGGACTGGGAAATGGATTGTCCTCACAGGTTCAGATACAGAGATCTTCACCTAGCAACAAAGAGGTTCGTAGAGAGCCAACTAATTGGAGTTGGAGGCTTTGGTTCTGTGTACAAAGGGGTGTTACCCAGAACAGGAACTGAGGTTGCTGTTAAAAGGATCCTGAGAACTCCAGCCAAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTAGGAAGATTGAGGCACAAGAATTTGGTGAACCTTCAAGGGTGGTGCAAGCACAAGAATGATCTCCTTTTGGTTTATGATTACATTCCAAATGGGAGCCTTGACTCTCTCCTATTCAGCAGAAGCTTTGTTTTGGATTGGGATCATAGATTCAGAATTCTCAAAGGTGTAGCTGCTGGGCTGTTGTATCTGCATGAAGAATGGGAGCAAGTGGTGATCCATAGAGATGTGAAATCTAGCAATATTCTTATTGATGGGGACTTTAATGCTCATTTAGGTGACTTTGGCCTAGCAAGGCTTTATAGCCATGATAAAGAGTCACACACAACAAGTGTGGTTGGAACCATAGGGTATATTGCACCGGAGTTAACTAGGACAGGAAAAGCATCTACAAGCTCTGATGTGTACGCATTTGGGGTCCTACTTCTTGAAGTGGTTGCAGGAACAAGACCTGTTGGTTCATCAGATCAGTTTTTCTTGGTGGATTGGGTTCTCGAAAATTTCCAACTGGGTCAGATTCTTGAAGTGGTTGATCCAAAGTTAGATTCAATTTATGAGGAAGAGGAAGTAGAATTGGTTCTGAAATTGGGTCTGTTATGCGCTCAAAACAAAGCTGAGTATAGACCTTCTATCGAACAAGTGACTAGGTACCTAAACTTTGATGACCCTTTTCCTGATATCTCTGATTGCAGATACTATGATTCTCAAAGTAGCACGACAAGCTTAGGGTTTTTAGAAGCCATGTCTACGGGTAAGACTTCATCCTCGTACAGTTTACCCTCCATTGACAGGAGTACAATGTCCATAGAAGCTGGCAGATAG