Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36558 LG11 25870114 25875924 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to blue light, cellular lipid metabolic process, pigment metabolic process, cellular response to light stimulus, cellular response to light stimulus, response to inorganic substance, photomorphogenesis, cellular lipid metabolic process, regulation of developmental process, cellular response to light stimulus, photomorphogenesis, cellular lipid metabolic process
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
G/T 25870262 upstream_gene_variant
A/T 25870286 upstream_gene_variant
G/T 25870415 upstream_gene_variant
T/A 25870423 upstream_gene_variant
G/A 25870449 upstream_gene_variant
A/G 25870688 upstream_gene_variant
G/A 25870794 upstream_gene_variant
G/T 25870817 upstream_gene_variant
G/A 25870846 upstream_gene_variant
C/T 25870867 upstream_gene_variant
A/G 25870946 upstream_gene_variant
T/A 25870989 upstream_gene_variant
A/G 25871031 upstream_gene_variant
G/A 25871065 upstream_gene_variant
A/T 25871146 upstream_gene_variant
T/C 25871154 upstream_gene_variant
C/T 25871340 upstream_gene_variant
G/T 25871373 upstream_gene_variant
T/C 25871482 missense_variant p.Thr250Ala
A/G 25871676 upstream_gene_variant
T/C 25871683 upstream_gene_variant
A/C 25871777 upstream_gene_variant
A/C 25871824 upstream_gene_variant
T/A 25871831 upstream_gene_variant
G/T 25871868 upstream_gene_variant
T/A 25871986 upstream_gene_variant
G/A 25871990 upstream_gene_variant
C/A 25872251 upstream_gene_variant
C/A 25872282 upstream_gene_variant
C/T 25872322 upstream_gene_variant
C/T 25872389 intron_variant
T/C 25872456 intron_variant
A/C 25872614 intron_variant
C/T 25872656 intron_variant
T/C 25872657 intron_variant
C/A 25872714 intron_variant
C/A 25872778 intron_variant
C/G 25872819 intron_variant
T/A 25873008 intron_variant
G/A 25873171 missense_variant p.Pro216Ser
A/T 25873228 stop_lost p.Ter197Lysext*?
T/C 25873235 synonymous_variant p.Leu194Leu
G/A 25873275 missense_variant p.Pro181Leu
C/G 25873308 intron_variant
A/T 25873481 synonymous_variant p.Ser149Ser
A/G 25873600 intron_variant
C/T 25873901 intron_variant
T/C 25873941 intron_variant
T/C 25874093 intron_variant
A/C 25874228 intron_variant
A/G 25874243 intron_variant
T/A 25874412 intron_variant
C/A 25874484 missense_variant p.Gly62Val
T/A 25874502 intron_variant
G/A 25874730 intron_variant
G/T 25874774 intron_variant
A/T 25875094 intron_variant
C/T 25875139 intron_variant
T/C 25875526 intron_variant
T/C 25875598 intron_variant
A/T 25875747 splice_donor_variant&intron_variant
G/T 25875887 missense_variant p.Pro13Gln

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36558.1
MTLPGVNSLPPPPPPTQTPALSPAVEDPNKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKATHPYPQKAPKITPTASQVMGPLQPSSAFIEPAYIYSSDSSSVLGTPVTNMPLTTWNYNAKPPVNVPQVTRDDMGLTGVAQTIPLNCCYSSSNENTHPTWPSSKKMNQGGQGKPMKVMPDFAQVYSFIGSVFDPNSTNQLQKLRQMDPINVETVLLLMRNLSVNLMSPEFEDHKRLLSSYDTDSDESKHVNICSKSLTNKSESAILSA*


CDS Sequence:
>Vu_36558.1
ATGACCCTTCCCGGCGTGAATTCTCTTCCGCCGCCACCGCCGCCAACTCAGACTCCAGCTCTTTCCCCCGCCGTGGAGGATCCAAATAAGAAGATCCGGAAACCCTACACGATTACAAAGTCCAGGGAGAGCTGGACCGAGCAGGAGCACGACAAATTTCTAGAAGCTCTCCAATTATTTGATCGGGACTGGAAAAAGATTGAAGCATTTGTTGGTTCAAAAACTGTTATCCAGATAAGAAGTCATGCACAGAAGTATTTTCTTAAAGTTCAGAAGAATGGAACAAGTGAACATGTTCCTCCTCCCCGGCCAAAGAGAAAAGCTACTCACCCATACCCTCAAAAGGCTCCTAAAATCACTCCTACTGCATCCCAAGTTATGGGCCCACTGCAACCTTCATCTGCTTTCATTGAACCTGCATATATTTATAGCTCGGATTCTTCATCTGTTCTTGGAACTCCAGTTACCAACATGCCTTTGACGACTTGGAACTATAATGCTAAACCACCCGTCAATGTGCCTCAAGTGACTAGAGATGACATGGGCCTGACCGGAGTGGCACAAACTATTCCTCTTAACTGTTGCTATAGCAGTAGTAATGAGAACACCCATCCAACTTGGCCAAGTAGCAAAAAGATGAATCAAGGTGGCCAGGGCAAGCCAATGAAAGTAATGCCAGATTTTGCTCAAGTCTACAGCTTCATTGGCAGTGTTTTTGATCCAAATTCGACTAATCAACTTCAGAAACTAAGACAGATGGACCCAATAAATGTGGAAACGGTATTACTGTTGATGAGAAATCTATCGGTCAATTTAATGAGTCCAGAGTTTGAGGACCATAAAAGGCTGCTTTCATCATATGATACCGACTCTGATGAGTCGAAGCATGTTAATATTTGCAGCAAATCCCTCACTAATAAATCCGAGAGTGCTATTCTGTCTGCATAA


Promoter Sequence:
>Vu_36558::LG11:25875924-25877924(-)
CGCAGTCTTCAAATCTATTAAGAATTAACACATTATAAACATCTGCAAATTCGAATTATTTGAGAACGTGTCTTATACGGATAAGTTCATTATCACACTTCTTTCTTTATAGCATTATAAGATATTTAAATTTAAGACTAATGAATTATAAATATATCCAAATACAGTTAAGAATGGTCTTACATGGATAAGTCCATCCTAACTTTTTGTTTTTTTTTTATAAGTTATAAGATATTTAAATTTAGAATTAAAAAAATTATAAATATCTATAAATCCGTTGCTATTTGAGAATAGGTCTTATAGAGATAAGTCTATCTTACCTCTTTTTTAGCCTTATAAGATATTTAAACTCAAAATTAATAATTTATAAATATCCATAAATCCGCAATTAATAACATGTCTCTGACTATTTTTTAGAGAGACAAATAAGGGATAAGGAATAGATAAAAACACATCATCCATCCTAATTTTACTCATTAAAAAAAGTTATTTTTTATTATTTTTTTTAAACTTGTTTATGCCCTTCTTTATAATTTAAATATATATTTTTTCCTTTTAAAGCCAAGAAATAGGTAGTGGTATTTTATTTTTCTAAAAATAGGATAATACGAATTCATGATTCTTGTTGTGGATGAAGCCAGAATTTTCCACACGAAAGTAACTTTAGTCACACTCCATTTGCATTCTCTTTATCTACGATAATCACGATCACGAGACCCAAAATCACGCCTATTTAAAAAATACACATCGTATTTTGTAGCCTTCGGAAAAGCGTTTACCTTCCACGTTTCAATCCTATAAACCCTAATTCAACACCAACTTCAATATAATATAAGTATCACCCCCACAACAACATAGACTATTTTATTTTGGAAACATAAAATAAGCTGTTTTTAAGCTAAGCATTTAATCCTTATCAAAATCTAGTGTGCTATGTTGCCCCTTGTTTTCATCATAAGTTTCAATGATTGCCACCATTTTCAATTAATCACGTGACCTTTCATCTTATCACTTTAGATTTTGTAAGTACTAAAAGAAGACATCATTGTAACATAAAGGAAAGTCAACATACGACCTTTGAAGCTACGCTTATGTTCTTTTTTCCCTTAGTTCTTCCGTCACCGTTGCACTTTAAACATTCAATTCTCGTATTAACTCCACCTAAACATTTAGTTATATTGATTTATCTTCTCAAAATCTTCTGCTATACCATGTTATTAAAGTATCTAAAAAAGAAAGATAAAAGAAGGTTAACAATTGACATTATAGTGGTTGTTAAAATTGCTTTTAATTAATAACCCATAACGAATTATAGTAGACAATTACATCATAATAAATTAGAATAAAGAGAACAATAGTTCGTTAGTTTTTCATCAACAATTACATCTTAATTAATATAAAGAAGTGGTATCACTAAGTACGCATAATAAAAAAAATAATTATCATATGACAAGTAATTTATGTTTAACTATATTTATTATCACGTTATGTTTCCGAGAAGGTGTATTAGTTTCATGCGTGTGTTAAATTTCCTTAGTTACAAATTTATAAGTTCATGCATTTCGTTTTTCAAACTTTTTTTATTTAACTTTCTAAAAAACACACATCCAAACGAAAATACATTTTTTATCGGCAAATAATTTGTAACCAGAAAAAAAATGCAAATAGCATAACAAGATAACCGCCACAGGGTGGTGACTCACCACGCAGGCGCAAAAGGGGTCTAAGGATAGAAAAGTAATTTCGCCTGCTTCTTTACGTCTATATAAAAGGTTGGTTGGAATTTGAGATTACAGAGACGAAAATCGCGAGAGGACGAACGAAACGAACACAAGAGAACAGCGCACAGTGGGAGATATATAGTTGCTGGGAAACAAAGAAACAGGTTTTGGAACACCAAACACTGACGAAATCGAATTGAGGTTACTGTTTTTGTCTGCTTGATGGTGTCGGTGAACCCAAACCCCGCCCAAGGCTTTTACTTCTTCGATCCCTCCAAT


Gene Sequence:
>Vu_36558(-)
ATGACCCTTCCCGGCGTGAATTCTCTTCCGCCGCCACCGCCGCCAACTCAGACTCCAGCTCTTTCCCCCGCCGTGGAGGATCCAAATAAGAAGATCCGGAAACCCTACACGATTACAAAGTCCAGGGAGAGCTGGACCGAGCAGGAGCACGACAAATTTCTAGAAGCTCTCCAATTGTGAGTTCGTTTTTGTATTTTTATTTTTATTTTTCATGGAAATGAAATTCCTTGGATGTGAATTACTCACTGGCAAGGAATTGGAGGATTGGTGATTCTTTTAGATTTTTTGGGAATTTGGCAGTTCTGGTTGTTTCTAGATGATTTGTTAATGGTGAATTAAGGTTTTTATTAGTTAAGTAGTTTGTAAGGAATAGGTGGCTATAGTGAGAATTTTTTGGGAATATATTTTTGGTTCGTTTATTTAATTGGGGTTTTCGAAATTATTTGCTTCTTTTTAATGATTTTAATGTTTCGATGCTGCTACTTCGCTAATATGATTTGGGTTTTTAGTTTTGAGGAAGATGAGGTTTAAAAGGAACATTTTTTGCACGGGAAAAAACTTATTTGTTTTTCTTTAATAATTGTAATATCAATTTTATTTGCTTAATTTCAACTCTGGTAGGTTGTAAAGCAGTTTATGTAGGGTGGGTTATTATTATTATTATAGTGAGAAGGTAATTCTTGCTACTTTTTGACATTTTGTACTTAATCATATTGCAAAATCTTACCTTACTATCTGAAATCCTGGACGAGCAGTATCCATACTTGAAATAGTTCGAAAACAAAGTGGTCTAATAAGCCATTGCATTTATTGTTTCACAGGTTAACGATTTTTTTGCACCGTGTTTAGTTTAGACTTTTTCAACAATAGGTTGCCCCTTCCAATCAAGGAACGAGTGGCAGAGTGAAGATGCTGTAGTGGAATGTTTTTAGAGGGAAGACATATATTGTTAGAACAGTTTGTCAATACTTGGTGTATTAAATGCAGTTCTGGGGGGCACCTCATGTTATTATGCCTAAACTGTTTTTTTCACATCTTCATTCAATTATATACTTTTAACAAACATCATTACATTTACATGTACACAGCTTTTTTTATAGCATGCAAATTCTTTAGAAGGTTAAGAATTGAAGGAATTAGGGTTTAGAAACTCCACAGGTCATTTAGAGAGAAGCATCGGAAAGTATCATAAAGCCATATGGTTGGTATTTTTCCATTTTGCAAGTGTGCATTGTGCTCACCAAGGAATGCAATTCCGTGCTTTCTGGTTAACATCACCTATGCACCTGAAATCAAAATGTTTTTTTTTTCCTTCTGTTGATCCCATGCCAAAAGCAGTATATGAAACAAATAGGATGGGTTATCAGTTATTTGTTTATTTTTGCTTATTTTCTTCTGCGTTTCTCATTTTTTTTTCTTGACAAATTTCAGATTTGATCGGGACTGGAAAAAGATTGAAGCATTTGTTGGTTCAAAAACTGTTATCCAGGTAATTACTATAGAAGCCAAAGGAAAACAAAGAACAAGATACTAGCGGATGCTAGCTGATTGAGTCTGTTTATTTAAAAGGAGTGAAACTTGACCTTCTCAACAATAAATTTGTTAACAATTTCACATTATTCTTGGATTTTCTGTTCCATGCTGGCTATTTAGTGCAATTTTCAGTGTCTCAACTGAATATTATACTTGAATTGTATATGAGTAAATGGCGACTTGATCATTTCCAAAAGACTGTCAATTGAAGCCCATGACCTGAGTTTGGATCTTCCCATTGCTTTTTATGCTCTTATATCTTCTCTTACTAGCAAAGTCATTTTTAATTCTTGTTCGTAGAATATTGTTGTCTAGATTTTTTTGCATCACAACTAAATGCAATTTATTATGTCTTTCTTCAAAATCTAAGGGTTGATCATGGGATTAGGGACATTAACTTTTAATTTGTTACTTTGGTGCATTTGTACTTAAGTAGAAAAGAAAGGACATAAAGTTATATAGATACTCATCTTGGATTGTATAATGTTATGGTGTTTATTTCATCAACTTTCTTGTTGCGAATCTCTGACATTCGTTATATGTTCCTTTAACTATCCTTTCTTCAACATTCTTTGTAAATTCTATTTGGCAGATAAGAAGTCATGCACAGAAGTATTTTCTTAAAGTTCAGAAGAATGGAACAAGTGAACATGTTCCTCCTCCCCGGCCAAAGAGAAAAGCTACTCACCCATACCCTCAAAAGGCTCCTAAAATCAGTTAGTATTGCTAATGTCAACCACGTTTAATGTTCACTGGTTTTGTCTATTGAATCTATTTTTAAATAACTCGTTTTTTTTTTCTTTTTTCAATTTATCAGCTCCTACTGCATCCCAAGTTATGGGCCCACTGCAACCTTCATCTGCTTTCATTGAACCTGCATATATTTATAGCTCGGATTCTTCATCTGTTCTTGGAACTCCAGTTACCAACATGCCTTTGACGACTTGGAACTATAATGCTAAACCACCCGTCAATGTGCCTCAAGTGACTAGAGGTTTTGTTTGTCCTGAAATCTAATGTTTTGTTTTACAATTTTTTTTTGTTTTCAAATATGTATTTCATTGAGGAAGGCTCTGCTAACCTGGAAAGTTTTTTGGTTTCTTAGATGACATGGGCCTGACCGGAGTGGCACAAACTATTCCTCTTAACTGTTGCTATAGCAGTAGTAATGAGAACACCCATCCAACTTGGCCAAGTAGCAAAAAGATGAATCAAGGTGGCCAGGGCAAGCCAATGAAAGGTTAGAATACTTTTTTCTTTAAATCGAACTTCTTGAAGTGGGCATACAAAATATTTAACTGAAACTTATCATAAAACTTGGAAATTGTAGTTTTAGATAATGAGGCACTTCTTGAGTTTTGATTGAACTAAAACGGAAAAAGAAGCCCTGAAGCTTGTACTTTTTTGGTAAAAAGATAATTTTCTGAGATGATTGTTGTTTAGGCATTTGCCCAATTATCCTCACTGTCTCGTAGAGTTATTCATCTAGTTGTGGATTGATTTATAGATATCATGTCATCAAGTAAAAGATAAAGTTTCTCATTCATTAGGATATTTGCTATTAAGGAGATAGATAAAAGAAATTGTGCATCAGCTTGTTATCTATTAGAATAGGCTTATTCTAGAATATCATCACTGAACCTGAGCTATGCTATTCTTTGATAAAGAAGTTGCCGTGATTTTTGAAGGTTCGATCTTACTCAAAAGTTTTAGTAGTTTCGTAGCTAATTGTATAGCTATGAGCAGGAGTAGTAGTGAAGAAAAGTGGGAGTTTGAATTATTATTTTTCTGTTATTTTTAGCTCAAGTTTAATGGATACGAAGCTGACCTATTTGATCGAGTTTCTCCTAACTCCTATTAGAATAGAAAAATAAGAAAAAAAAACATGAAATTACCTTTTTCTTAAGTTAAAATTAGCTTATAAGCAAGTTATAAATAAAAATTTAGAAAAGCTGTATGAGAGAGAAAACTTCTACAAATTACTCATGCATAAACTAATTTTGGGTGAAAACAAATTATAAATAAAAATTTAGAGAAGCTATATAAGAGAAGAGAACTTCTACAAATTAGCTCATGCATAAGCTAATTTTAGCTTATGGAAAAGTTGATGTCGAATTTTCTTATTTTTTTTCCTAGAAGAGGTTATGGAAAAATTCGTCCAAATAAGCTTTAAAGGTACCTAAGATCAAGAAGAAAATTTAATTAAGCTGCACAAGGAGCATTCCTTAAAGCTTTTAGTTCAAGGAAGTAAAAATTATGTTATTATAACACATTTCTTGAACTTTGCATTTGTTTATCTTCAATCATGTTCAAGTAGAGTCAGAGACCCTTGGAATCAGTTATTAAGCAATGAAAGTGACTTGATTATACATAGAGCTCTAGAGCTGCTATATTGAGGGGACGGCAGGAGTGATGGTAAAATTGTTATTTTGTGTGCCTGTACCACTGCTACATAAAATATTTCAGAGTTGGCTTATGGTTGACTACCCAAGAGTTGAAGCTGGGCCCTTAATTCAAAGTATGCATTTTTCATGTGTTACTGGGGCTTCAAGAAACAAGTAGGGGTGTGCTAGAGTAGACATATTATATCCAGCACATCTGGACCTTTTGACAATGAATAATATGCATGTTTCTCCTTTCAGAATATAATTTCTGAAGTGAGTAGTGTGTATAAACAACTGTAAATTTTTCCAATTTTCATAACAATAAAAATATTTATGAACAGTATTAATGTTTTAAGTTTGCTATGTTTTGCTATGCTATATGTCTGGTGTTACAAGTGTTGAGCATTGTTTCACTTGTTGATAAGTTTGACTTGTGTATACAGTAATGCCAGATTTTGCTCAAGTCTACAGCTTCATTGGCAGTGTTTTTGATCCAAATTCGACTAATCAACTTCAGAAACTAAGACAGATGGACCCAATAAATGTGGAAACGGTAATTAATATCAAGTCCATCATTTTCTTTTCCTCTTTATCTTTCGGGGACTAAAGGTCCAAATTTTGGGTTCATGTTCGTCCTTTTGTCTGCCTGAGTATTTTATATTGTTCTGTTTTGCAGGTATTACTGTTGATGAGAAATCTATCGGTCAATTTAATGAGTCCAGAGTTTGAGGACCATGTAAGTTTGTTTCCAACAGTTTGTATTTTTTAGTTATTGACCCCATCGCATTAGCTGCTAGATGCCAAAGTCATCTTTTAATCCTTGTTGCTTGCTTTTATTATCCAACTTAACGAAAATGTGAGTTTATGTTATTAAATTGCCTTCAAATGGGGGGATTAGTTTTAACCAGTAAATATATTGATATCACCACGTTGATATTTTGTCGCCGGAATCCTCAATAAGCCCCTAGGTCTGCGATGATATAGTTATGGCTCTATCACTGCACGTATGTTGTTTAGCAGTGTGGGTGGTTTTAAAATTGAATTTATTTTCTGGAGCATGATATGGGATTTCTGACTTTGGCTATATTGTACTTTGCAATATCTCCACATTCTTGCTGTTGTGTTCATGCTTATTATTTTGTTTTCACTTTGCATCATATTCAAATAAGTCTGTTCAGTAACAATGGACCCTTATTGATTCCTATTTTTGCAGCTGTACACTTTAGCTGTTTGACATTGGGGGTCTGTTTAGACGAGCTACTCCTAAAGGATTTTTGGGAGAGGAAAAGAAAGAAAGAATAAATAAATTAAATTAACTTTTCCATAAATCAAAATTAATTTATTCATAAGTTAAAAATAAAAATTTGAGGAAGTTATACAAGACAATTTCTGCTAATTAGTTTATATATAATCTAAATTTAACTTATGGAAAAGTTAATTTCATCTTTAGTCTTTTTTTTTCTTAGAAGTCTTCGTGAAAAAACTCGTCCTAATAGACTCAGTAGAATGTATAAAATCAATGCCCCAATGATGAGGACTCATTGCAGTTATTCACACACGCAAGAAGTTTAGAAAAACTATTTTATGCATTTCTTTATTTTGAATTGCATGCACGGATATTCTGCAGCATTCTATTCTTATTCTGTTTGTTCCGAATTCACAGACATGCAAGTGTTGTCTTATTATTCTGCATGACAAAGTCCTAGTCCTAGCTTAAATTATTTTATTTTATTTTCCATAACATGCACTTCTTCATGGTCCACTGACAAATTCTTTTTTAATGCAGAAAAGGCTGCTTTCATCATATGATACCGACTCTGATGAGTCGAAGCATGTTAATATTTGCAGCAAATCCCTCACTAATAAATCCGAGAGTGCTATTCTGTCTGCATAA