Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_36779 LG11 29098739 29101720 uncharacterized protein LOC106778155
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, positive regulation of defense response to bacterium, regulation of transcription, DNA-templated, regulation of defense response, positive regulation of defense response to bacterium, negative regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, positive regulation of defense response to bacterium, regulation of transcription, DNA-templated, cellular response to osmotic stress, regulation of transcription, DNA-templated, cellular response to osmotic stress, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, positive regulation of defense response to bacterium, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, cellular response to osmotic stress, negative regulation of transcription, DNA-templated, cellular response to osmotic stress, positive regulation of defense response to bacterium, positive regulation of defense response to bacterium, negative regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, endoplasmic reticulum membrane, nucleus, nucleus, plasma membrane, endoplasmic reticulum membrane, endoplasmic reticulum membrane, nucleus, nucleus
Molecular Function   enables   protein binding, DNA-binding transcription factor activity, calmodulin binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, calmodulin binding, transcription cis-regulatory region binding, DNA binding
SNP Position Effect Amino acid change
A/T 29099152 intron_variant
C/A 29099512 missense_variant p.Gln540His
G/T 29099540 missense_variant p.Pro531Gln
A/T 29099631 missense_variant p.Ser501Thr
C/T 29099637 missense_variant p.Glu499Lys
A/C 29099671 synonymous_variant p.Thr487Thr
T/C 29099679 missense_variant p.Arg485Gly
A/C 29099692 missense_variant p.Ile480Met
A/T 29099801 missense_variant p.Met444Lys

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_36779.1
MCLQKPMEIVGYGFRPTDEELVHSHLKPKLLDEELVHVMTDIDLCAVEPWEVPEMLAKSVIPFENSEWFFFSPVKLKYSNSERFKRTTKSGFWKPTGEPRDVRTEDTNTVIGTKKTLVFYIGRASKAVKSNWVIHEYHALNSIQSQNAFVLCRLKKKHGKTTEGGTTALISDEEESSRNVVSDNEHQAIAEGVPSGDTFSRMETICQLTYQAEINISPTEQSLIDIEQDEASFPNPSNDAYFRKEINNRHIPYAQTPFEPMHTSLGSTQNPFEAGPMLTPFEPTQPSFETTQPSFETTKTPFDTMETPFDTLETLLGTMQSPLGAMRTPLGAMYTSFEITQPSLGSMLTPLETTQPSLETVKTPFEIMETPFDTTKTLSGTLQSPLGAMQTPLGAMYTSFETTQTSLGSMLTSFETTQPSFETTNTPFETMGTPFDTMETPLGAMYTSFETMQTSLGSMLTPFETTQFETSKCLETPLGAIRTSLRATYTPPQMMYPPSETSHIPLGSMQTPFGVSSPLASRKIPFESRKIPFQNTHTPSQTPFEFPKSLKRTYCESTCINPEVVLKLDDSIEDSSTMCTEYLNSDEYHSSKRFKTSYDVVDGDTDLLFSNQEASQKQVMGRSVSSKTEQLHMVRTKNFVPLLD*


CDS Sequence:
>Vu_36779.1
ATGTGTTTACAAAAACCAATGGAGATTGTAGGATACGGTTTTCGTCCCACCGATGAAGAACTTGTCCACTCTCACCTCAAACCCAAGTTGCTAGATGAAGAACTTGTCCATGTCATGACTGACATAGATCTTTGCGCTGTGGAACCTTGGGAAGTACCAGAGATGTTAGCAAAATCAGTAATACCATTCGAAAACTCAGAATGGTTTTTCTTCAGTCCTGTTAAGTTGAAGTACTCAAATAGTGAAAGGTTTAAAAGGACAACCAAGAGTGGGTTCTGGAAACCCACGGGAGAACCCCGTGATGTTAGAACAGAGGACACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTTCTATATTGGTCGTGCTTCCAAAGCTGTCAAATCCAACTGGGTTATTCACGAATATCATGCTCTTAACTCAATCCAAAGCCAGAATGCTTTTGTGTTATGCCGCTTGAAAAAGAAACATGGCAAAACGACCGAAGGAGGAACTACTGCACTGATCTCTGATGAAGAGGAATCCAGTAGAAATGTGGTTTCTGACAATGAACATCAGGCAATAGCAGAAGGAGTTCCATCTGGAGATACTTTTAGCAGAATGGAAACAATCTGTCAGTTAACATATCAGGCAGAAATAAACATCTCCCCAACAGAACAGTCTCTAATTGATATTGAGCAGGATGAAGCATCTTTCCCAAACCCATCTAACGATGCCTATTTTAGAAAGGAAATCAACAATAGGCATATCCCATATGCACAGACTCCATTTGAACCTATGCATACTTCTTTAGGATCTACCCAAAATCCATTTGAAGCTGGACCTATGTTAACTCCTTTTGAACCTACACAACCTTCATTTGAAACTACACAACCTTCATTTGAAACTACAAAGACTCCTTTTGATACTATGGAGACTCCTTTTGATACACTGGAGACTCTTTTAGGAACTATGCAATCTCCTTTAGGAGCTATGCGGACTCCTTTAGGAGCTATGTATACTTCATTTGAAATTACTCAGCCTTCTTTAGGATCTATGTTAACTCCTTTAGAAACTACACAACCTTCACTTGAAACTGTAAAGACCCCTTTTGAAATTATGGAGACTCCTTTTGATACTACGAAGACTCTTTCAGGAACTTTGCAGTCTCCTTTGGGAGCTATGCAGACTCCTTTAGGAGCTATGTATACTTCATTTGAAACTACACAGACTTCTTTAGGATCTATGTTAACTTCTTTCGAAACTACACAACCTTCATTTGAAACTACAAATACTCCTTTTGAAACTATGGGGACTCCTTTTGATACTATGGAGACTCCTTTGGGAGCTATGTATACTTCATTTGAAACTATGCAAACATCTTTAGGATCTATGTTAACTCCTTTTGAAACTACACAATTTGAAACTTCGAAGTGTTTGGAAACTCCTTTAGGAGCTATTCGGACTTCTTTAAGAGCTACTTATACTCCACCTCAAATGATGTATCCTCCATCTGAAACTTCGCATATTCCTTTAGGATCTATGCAGACTCCATTTGGAGTTTCAAGTCCTTTAGCATCTAGGAAGATTCCTTTTGAAAGTAGGAAAATTCCATTTCAAAATACACATACCCCATCGCAGACTCCTTTTGAGTTCCCAAAATCATTGAAAAGGACATATTGTGAAAGCACTTGCATAAATCCAGAAGTCGTCCTTAAACTGGACGATAGTATTGAAGATAGTTCAACTATGTGTACTGAATATCTTAATTCAGATGAATACCATTCATCAAAAAGGTTTAAAACATCATATGATGTTGTAGATGGTGATACAGATCTTTTATTTTCCAACCAAGAAGCAAGTCAGAAACAAGTCATGGGAAGATCAGTATCATCTAAGACCGAACAACTTCATATGGTGCGAACTAAGAACTTCGTACCATTATTGGATTAG


Promoter Sequence:
>Vu_36779::LG11:29101720-29103720(-)
AGACTTCTTTGGGCGTGGTGGCTTTCGATACTTTCTGAAAAATCGTAGAAGAAACACATTGATGCAGTAGCATTCTTGCCTTGCAATCAAGTCGTCTATTTTCTTTGTACTGCTTTTTCACTTCTTTAGTATCACCTTTCAAAGGTTCTTTGAAGTCCTTTCTTTACCACATCGTCAACTTCTTGAAACCCAAGGATAGCCTCACACCACTTCTTTACCGCACCAGTCATCATAATCCTTGCCATCGAATATCGGGAGATTACTATGAATTAATCTGGCCATCACACCACTTCTTTCTTCTTGAACCGAATCTTCAGTTTTGATACCACTATTGTTCCAAGACAACAATATTATGCAGAGAGTTTTACAGTAGACAGAGAAGGAGAGAAACGAGTGAGTGTATTTCTCATTAACCAACAATGAAAATACAAGACAATGTATATAACAACAAATGAATGCACATCTAACTGTAACAGTAAAACAGTTAAGACAGTTAAGAGTTTTGTTTTATATTCTCAACAATCTTCATAAAAAAAATATTAAAAAATGAAGGCTACCTGGAATTTTATGGAAAAGATAATGCATGTAAAAGTTCCAAGCTTAATTCAACGGTTTTGAATATAATAAAAATTATGTATTAGATTAATATATAAGATATCTAAAATATTTATAATAATAAAATATCTTCTAATGTTCATCCAACCAGAATAAAAGACTAGACTCAGTCAGTACCCAATTGACTACAACATGCGGCATGAACACCCAAATAACATGGACAAACAATCTGTGAATCGTCAGTACGTGGCGTTGGAGATTCACCACATGCCTGGCCTATACCCAAAAAAGTTATTATTTTTTTTTTTAGGGAGTCTCAGAGTAGTGGTATCTTAACATAATCTGTAATCATGTGCTCATAAAAATGTTTATGCTTTTGACAGAATGAGTTACTAATTTTTAAGGGTGCAAAAACTAGTGAGGAGCATAAGAAAGCAACACTGTACAAACACCATAAGTACATGGTGGGGGCAACCAAGAGAGTTGATTAAAAAGATTCGATGAATGAAGGGATCAAAAGGTAAACTTGGGAAGCAAGTCTCAGTTTCATAAATTCATATTACCACTTTCAGCAATGCTAACTTTCTGGAACCTTCATATGAAAAGTCACTCACGCGGATACTGAAAAAACGTGGATGTGAAAAGAAAAATTGAGGTGATAATTAGTTGGAGTTCACTGTCTGTTCTTGGAAGTTAGCACATTACTAAAATCTTAAAAATTATATCCTTCTTTGGAGTCATGTTCTTGATTGGTGGGGATGAGTATAACTAACCTCCAAAATTCACTAACCAATAGTTTTGAAAGAACATTGAAATGGTGGGCCACGGAAGAAACTTGGAACCAAGGCTCAAATAACTTTGAAAGGCATTGATTCTTCTCACAGAGACTCATAACAGATTATATCCCTATCGAATGAGAAAATTTGTTAAATATATTTTTGTCCATTCATTAGAAAGTGCTGAGTTAGGAAAAAGATTCTCATTTTCACGCGGTATTAGTACAATACAGTCACTTCATATTTACTGTATCTATCCGTTACTTAACAATTTTGATTTTAGAATCACGATAACATTTCATATATTTAGCCTTTATATGTTGAATTTTCTTATAAAATAACCTGCCAATAAGATCACTTAGATGCAATATATTTGAACTATAAGTGCGTGATCTAAGTTAAAATACATATGTTGATTATTTTTATAGAATAATTTTACGAACTTTTTATAAAGTTTGAAAGTTTACCTCATATTCCGAATCTTGAAAAAAGAGTTTTGTATTATTATAATGTACTTTCCAACGACAACTTCTTAACTAAGGAGTCATGTCAAGTCAATGAATGTGCAATTATAAACACAAACACAAACACTGAAAACACTAAGTAGCTTTCTTCATTCAGCACCCTGTTTCATCATCCAACCTTCTTTCTTCATTCAACACTGAAGAC


Gene Sequence:
>Vu_36779(-)
ATGTGTTTACAAAAACCAATGGAGATTGTAGGATACGGTTTTCGTCCCACCGATGAAGAACTTGTCCACTCTCACCTCAAACCCAAGTTGCTAGATGAAGAACTTGTCCATGTCATGACTGACATAGATCTTTGCGCTGTGGAACCTTGGGAAGTACCAGGTAATAATCGAAAGCCAAACTCTCCATGCATCTTCATGAAATCAACATCGTCCTTTTTCTTGTTCTGATCTTTACTTCAATTTTTATTGTTTTAAATAGAGATGTTAGCAAAATCAGTAATACCATTCGAAAACTCAGAATGGTTTTTCTTCAGTCCTGTTAAGTTGAAGTACTCAAATAGTGAAAGGTTTAAAAGGACAACCAAGAGTGGGTTCTGGAAACCCACGGGAGAACCCCGTGATGTTAGAACAGAGGACACCAACACTGTCATTGGGACTAAGAAGACTCTTGTTTTCTATATTGGTCGTGCTTCCAAAGCTGTCAAATCCAACTGGGTTATTCACGAATATCATGCTCTTAACTCAATCCAAAGCCAGGTTTGTATTTCATTTTTTAAGAAACTTTGGAAATAATCTCTGTACTAAATTACAGTGTGTGAAAGGAATGTAAACTAGTCGAACCAAGATGAGTATTTGAAGCCTGCAATAATCTCTGTACAAAACTAGTCGAAACAAGATATCCCGTGTGACTTTGTGCTTTAATCTTGACTGTTTGTAGTAATTAGTTTCTCGACAAAGCTTAAGGAGAACCTCTCATGTGACTTATAGAATGTGTTTAATTGATCTTTTCAAAATTCATCATTAATTCTCATCGAAGACTGTCAATTTCTTCTGCATACGTTTGCCTCATTTGTCTTGGCCTTTTACTTTTGTGAATTGTGCCAAATGAATGCTTACCATACTCCAATTTTTTCAGAATGCTTTTGTGTTATGCCGCTTGAAAAAGAAACATGGCAAAACGACCGAAGGAGGAACTACTGCACTGATCTCTGATGAAGAGGAATCCAGTAGAAATGTGGTTTCTGACAATGAACATCAGGCAATAGCAGAAGGAGTTCCATCTGTAAGCTGAAGCATCTTTCATGAACATATATACACTGTGACATGCGAACATGCCGAAAATTTATGCTTCTTTCTGTCATTTCATATATATATTTACATTTTTTTTCAGGGAGATACTTTTAGCAGAATGGAAACAATCTGTCAGTTAACATATCAGGCAGAAATAAACATCTCCCCAACAGAACAGTCTCTAATTGATATTGAGCAGGATGAAGCATCTTTCCCAAACCCATCTAACGATGCCTATTTTAGAAAGGAAATCAACAATAGGCATATCCCATATGCACAGACTCCATTTGAACCTATGCATACTTCTTTAGGATCTACCCAAAATCCATTTGAAGCTGGACCTATGTTAACTCCTTTTGAACCTACACAACCTTCATTTGAAACTACACAACCTTCATTTGAAACTACAAAGACTCCTTTTGATACTATGGAGACTCCTTTTGATACACTGGAGACTCTTTTAGGAACTATGCAATCTCCTTTAGGAGCTATGCGGACTCCTTTAGGAGCTATGTATACTTCATTTGAAATTACTCAGCCTTCTTTAGGATCTATGTTAACTCCTTTAGAAACTACACAACCTTCACTTGAAACTGTAAAGACCCCTTTTGAAATTATGGAGACTCCTTTTGATACTACGAAGACTCTTTCAGGAACTTTGCAGTCTCCTTTGGGAGCTATGCAGACTCCTTTAGGAGCTATGTATACTTCATTTGAAACTACACAGACTTCTTTAGGATCTATGTTAACTTCTTTCGAAACTACACAACCTTCATTTGAAACTACAAATACTCCTTTTGAAACTATGGGGACTCCTTTTGATACTATGGAGACTCCTTTGGGAGCTATGTATACTTCATTTGAAACTATGCAAACATCTTTAGGATCTATGTTAACTCCTTTTGAAACTACACAATTTGAAACTTCGAAGTGTTTGGAAACTCCTTTAGGAGCTATTCGGACTTCTTTAAGAGCTACTTATACTCCACCTCAAATGATGTATCCTCCATCTGAAACTTCGCATATTCCTTTAGGATCTATGCAGACTCCATTTGGAGTTTCAAGTCCTTTAGCATCTAGGAAGATTCCTTTTGAAAGTAGGAAAATTCCATTTCAAAATACACATACCCCATCGCAGACTCCTTTTGAGTTCCCAAAATCATTGAAAAGGACATATTGTGAAAGCACTTGCATAAATCCAGAAGTCGTCCTTAAACTGGTAAATATTTATTTTGCAAAGTCCAAATAATACTGAGTGTACCTCCTTTCATTTCTGAACTTTCATTTTGATTTAATAAGTTAAAATTTCAGAGTGCATTATTATGATTTGAATTTGGTTAGAATTTTCACAATGTATCGGGATTTTCTCAAGTAGATTTTTAAGAGATACTCACGTAAAATGTCTTTTTTGAGTTGGCTTTGATGCGTTCTTGTGATTCATGAGTCATTGACGGGCTATTATTGAGAACTACACTTTTTCTTGAGTTTGTGATATTGTTATATTCTTTTGAGCACTTTTATCAACGTATTCATCTGTTTATATTTTCTTTTGAAATCATTGCAGGACGATAGTATTGAAGATAGTTCAACTATGTGTACTGAATATCTTAATTCAGATGAATACCATTCATCAAAAAGGTTTAAAACATCATATGATGTTGTAGATGGTGATACAGATCTTTTATTTTCCAACCAAGAAGCAAGTCAGAAACAAGTAAGTATATTTCAAGACTATTTTTGGGGAGTGGATGCATCCTCATGTGACTCTACAGTATATAATCCTGAAGAGATCAATTAGAATGAAATATCTAGTTTTCCTTGCACTTAAAGGTCATGGGAAGATCAGTATCATCTAAGACCGAACAACTTCATATGGTGCGAACTAAGAACTTCGTACCATTATTGGATTAG