Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_37244 LG11 33579145 33580773 PREDICTED: mitogen-activated protein kinase kinase 5-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   floral organ abscission, inflorescence development, floral organ abscission, floral organ abscission, defense response to other organism, MAPK cascade, floral organ abscission, floral organ abscission, regulation of stomatal complex development, inflorescence development, regulation of stomatal complex development, floral organ abscission, floral organ abscission, regulation of stomatal complex patterning, MAPK cascade, inflorescence development, regulation of stomatal complex development, defense response to other organism, floral organ abscission, floral organ abscission, inflorescence development, pollen-pistil interaction, pollen-pistil interaction, floral organ abscission, pollen-pistil interaction, defense response to other organism
Cellular Component   is active in   cytoplasm
Cellular Component   located in   nucleus, cytoplasm, nucleus, chloroplast stroma, chloroplast stroma
Molecular Function   enables   protein binding, protein binding, MAP kinase kinase activity, MAP kinase kinase activity, protein binding, MAP kinase kinase activity, MAP kinase kinase activity, MAP kinase kinase activity, protein serine/threonine kinase activity, MAP kinase kinase activity, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, MAP kinase kinase activity, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, MAP kinase kinase activity, protein binding, protein binding, MAP kinase kinase activity
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
T/A 33579236 5_prime_UTR_variant
C/T 33579256 5_prime_UTR_premature_start_codon_gain_variant
T/A 33579308 5_prime_UTR_variant
C/G 33579579 missense_variant p.Pro61Ala
G/T 33580181 synonymous_variant p.Gly261Gly
T/C 33580519 3_prime_UTR_variant
T/A 33580722 3_prime_UTR_variant
A/G 33580740 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_37244.1
MRPMQLPPPSASGSGSASAPPPTNNKDHRPQRRRKDLTLPLPQRDTNLAVPLPLPPSTAPPAASGGASQQQQQQQLVIPFAELERLNRIGSGSGGTVYKVVHRTSRRVYALKVIYGHHEESVRRQIHREIQILRDVDDPNVVKCHEMYDQNSEIQVLLEFMDGGSLEGKHIPHEQQLADLSRQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSFGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPPSASLHFRDFISRCLQRDPSRRWSASRLLEHPFIAPPHSNHNQLPPNLHQLLPPPPPRPLPS*


CDS Sequence:
>Vu_37244.1
ATGAGGCCGATGCAACTCCCACCGCCTTCTGCCTCTGGCTCTGGCTCCGCCTCCGCTCCGCCGCCTACCAACAACAAGGATCACCGTCCCCAGCGACGCCGCAAGGACCTCACGCTGCCGCTGCCGCAGCGTGACACTAATTTGGCGGTGCCGCTTCCTCTTCCGCCATCCACGGCTCCGCCCGCGGCCAGCGGAGGAGCCAGCCAGCAGCAGCAGCAGCAACAGCTGGTGATCCCGTTCGCAGAGCTGGAGAGACTGAACCGCATCGGGAGCGGGAGCGGGGGGACTGTGTACAAGGTTGTGCACCGAACTAGCAGGCGCGTGTACGCGCTGAAGGTGATATACGGGCACCACGAGGAGTCCGTGAGGCGGCAGATCCACCGGGAAATCCAGATCCTGCGGGACGTGGACGATCCGAACGTGGTGAAGTGTCACGAGATGTACGATCAGAACAGCGAAATCCAGGTGCTTCTGGAGTTCATGGACGGGGGATCTCTGGAGGGGAAGCACATCCCGCACGAGCAGCAGCTGGCAGATCTGTCCAGGCAGATTCTTCGGGGGCTGGCGTACCTGCACCGGCGGCACATCGTGCACAGGGACATCAAACCCTCGAATCTGCTGATAAACTCGCGGAAGCAGGTGAAGATCGCGGACTTCGGGGTGGGTCGGATTCTGAACCAGACCATGGATCCGTGCAATTCTTCGGTGGGGACGATCGCCTACATGAGTCCGGAGAGGATCAACACGGACATAAACGACGGCCAATACGACGCTTACGCGGGGGACATATGGAGCTTTGGGGTTAGCATATTGGAGTTCTACATGGGCAGATTTCCCTTCGCGGTTGGGAGGCAGGGCGATTGGGCCAGCCTCATGTGCGCTATCTGTATGTCTCAGCCACCCGAGGCTCCTCCCTCTGCCTCCCTCCACTTCAGGGATTTCATCTCTAGGTGCCTCCAGCGGGATCCCTCTCGCCGATGGTCTGCCTCAAGGTTGCTGGAACACCCTTTCATTGCCCCTCCCCACTCCAACCACAATCAGCTTCCTCCCAATCTCCACCAGCTCCTACCTCCTCCTCCTCCCAGGCCTCTTCCCTCCTAG


Promoter Sequence:
>Vu_37244::LG11:33577145-33579145(+)
AAGTGATATAGTTTACAAAAATAGTCAACGTCCAAATCAGTTTTTATAATTAGTAAAGGTTTTAATAAATGATTTTATTAACAATACTTCATAAATAACGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAACTATTATTTATTAGGAATAGGATTCGTAAGATTATTTGTTTTAGAGTTTCTTAATTTATTTTTTTATTTGTTCTATTATTTATGTGAATTCTTATTACAAGTTTGTAGTACAGATATCTGATTCATATTGAGTCTTCAGTGTATGAGATAACTTTTTCATCTTTGTTTAGGTTAAGATATCTTAAACCTCTTCCCGTATCTTAATTTTGTAGACTTACATTATTCAGCCCCAGGTGTGATTGACTTCTTTAGTATTTGCCACAGATATTTTGATTTCCTTGTTATAAACTAATGACTTTTTTGTGTCACTATTTTATTGGGTTTGTATATTTAAAATTAATCAATCACAAATTATTACATAAACTATTACACAAGTGTTATAAAAAGGTTATAAAAAAAATATATTAAAATAACATTTTCCTTTTGATAATAAGTTTTAATCACTATTTTATCCATCTATTTAAATTTATTTAAAAAAATATTCAAAACAAACTAATTAAGAGCCCAATCTATTATAAAAAAAATTGTCAAAAAAACTATTAAATAAATATTTTCTTACACTAATTTTCCAAAATTGAGATATACCGACAAACCTGCTATCTTTTTGTACATTAACATCTTGATAGACTTGTTATATTAAGATCGATGTGTCATTGACATTCTTTACTCTACAAATATCTATAAAAAAATTTGTATTTTAAATTATATTTTATTTTAAGAATACGTTTAAAATTGTCTTTTTTTACTTTTAACCATTATCACAGTGAAAGGTACACTTAAAAAGAATGTCATATGTCATTATTTTATTAGTCTATTTAAATTTTAAAAGAAATATTTGAAACGGATCAATCAAAAACTACCACATGAGTAAAATATTTGAGCGTTTCTAAAAAAATTGTTAAAAAAATATCTTTTTACACTAATTTTCTAAAATTGAAATACACCGGTAAACTTGTTATCTATACATTAACATCTTAGTAGACTTATTATGTTAAGATCGTCATTGACATTTTTTTTTACAAATATCTATAAAAAATTTTGTATTTTAAATTATATATTTTATTTTAAGAATACATTTAAAATTGTTTTTTATTTATTTTGAACATTATTATCGTAAAAAGTACACCTAAAAACTATAAATAAAGGTAATCATTATATCTGTGTGACTTCATTCATCAATAGGGCAACAAAATGAAGCAGTTGAAGTGTCTTTTAGAAGATGAATTAGAGAGAGTGAAGAAGTTGAGTAAAATTATGTTGTAAAAGAGGTGTATATTTGTATTAAAGATGGGTTTGAAATGTGCTTTAGAAAAGAAAAAAGAAGGTACGGTGAGCTAAGAATAGTTTAGAAGAATGAGAGTGTGATTAAGTGGAGGATTAAGATAAATAAAGAATGGGTTTTTATGATGAAAAAGTTGGAGGGAGAATGAGTGGAGGAGAAAAATAAAAGGAAGAAATGAAAGAATAGAGGAATTTGAAGTTGACAGATGTGCGCAGAGCGTGGATTTGTAGCTGTTGCGTGTTGCGAATGGGAGAAGATTGGATTGGTGTAAATAATAATAATAATAAATAAATAAATAAAAATAAAAAAAGAAAAAGTGTGTTTGTTGAGAGAGTGTAGTGTGGAAGTGCGGTGTGATCCAACCACGGAGATGGTCTTGGCACATAGGAAGGTAATTGGTCCACGTTCCCCACACGGGCCCTGGAGGCGCGTGGACCCCATGCCTTTTAAATCTGGATTCCCTCTTTTGATAGCTACCTCTCCATTTACTTTTTTATGAATTTAGAAAATAAGTTAAAAAAGTTGTTTTTAATTTTGCCCTCTGATA


Gene Sequence:
>Vu_37244(+)
ATGGTGCAGAAGAAGTAAAGGGAAGAAATCAAATCATATCAAATCGATTTTCGTTTGGGTCGCTTCTGCTTCTTCTTCTTCATCTTCTTCTTCATCTCTCTCAAACTTCCTCGAACCTTCTCTGCACTTCCCTCATGGACATTATATGAACTTCCTTTGGCTCTTCTCTTTCTTTCCTTTTCTTATTAATATTATAATCTAAACATAAATTATTCGTATATATTCTTTTTTTCACACTGGATTCGAGACATGAGATGAGGCCGATGCAACTCCCACCGCCTTCTGCCTCTGGCTCTGGCTCCGCCTCCGCTCCGCCGCCTACCAACAACAAGGATCACCGTCCCCAGCGACGCCGCAAGGACCTCACGCTGCCGCTGCCGCAGCGTGACACTAATTTGGCGGTGCCGCTTCCTCTTCCGCCATCCACGGCTCCGCCCGCGGCCAGCGGAGGAGCCAGCCAGCAGCAGCAGCAGCAACAGCTGGTGATCCCGTTCGCAGAGCTGGAGAGACTGAACCGCATCGGGAGCGGGAGCGGGGGGACTGTGTACAAGGTTGTGCACCGAACTAGCAGGCGCGTGTACGCGCTGAAGGTGATATACGGGCACCACGAGGAGTCCGTGAGGCGGCAGATCCACCGGGAAATCCAGATCCTGCGGGACGTGGACGATCCGAACGTGGTGAAGTGTCACGAGATGTACGATCAGAACAGCGAAATCCAGGTGCTTCTGGAGTTCATGGACGGGGGATCTCTGGAGGGGAAGCACATCCCGCACGAGCAGCAGCTGGCAGATCTGTCCAGGCAGATTCTTCGGGGGCTGGCGTACCTGCACCGGCGGCACATCGTGCACAGGGACATCAAACCCTCGAATCTGCTGATAAACTCGCGGAAGCAGGTGAAGATCGCGGACTTCGGGGTGGGTCGGATTCTGAACCAGACCATGGATCCGTGCAATTCTTCGGTGGGGACGATCGCCTACATGAGTCCGGAGAGGATCAACACGGACATAAACGACGGCCAATACGACGCTTACGCGGGGGACATATGGAGCTTTGGGGTTAGCATATTGGAGTTCTACATGGGCAGATTTCCCTTCGCGGTTGGGAGGCAGGGCGATTGGGCCAGCCTCATGTGCGCTATCTGTATGTCTCAGCCACCCGAGGCTCCTCCCTCTGCCTCCCTCCACTTCAGGGATTTCATCTCTAGGTGCCTCCAGCGGGATCCCTCTCGCCGATGGTCTGCCTCAAGGTTGCTGGAACACCCTTTCATTGCCCCTCCCCACTCCAACCACAATCAGCTTCCTCCCAATCTCCACCAGCTCCTACCTCCTCCTCCTCCCAGGCCTCTTCCCTCCTAGCAACCCGTACTAAACTTACTCTCTTACTTCTTGCCTGTAATTTTTTATTTATTACAAATCAATGCTACATGCCTCCTCACCGGAGAATGGATCGATCGATGAACCACATGGATGCCCCACCGCCACTTGCTTAGCTACCCCTATCCGCTCTGCTGCTTTGTTTTCGTTTTCATTTTCATTTTCATACAAATCAAATTTCAATATTCCATTTTCAGCCATACATTACAATGTTTTCTTTCTACTTACCATAACATGCCCTGCTTGCTTTGCTTTG